Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3379 96.9 2e-15 >seq3379 Length=20444 Score = 96.9 bits (106), Expect = 2e-15 Identities = 270/412 (66%), Gaps = 2/412 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 ||||| ||| | | ||||| || | || || ||||| || || |||| |||||| || Sbjct 843 GCCTTCGCGTCCATCGAAGGTGTTTTCTTCTCCGGGTCCTTCGCCTCCATCTTCTGGTTG 784 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||| | | ||||| |||||| | || |||||||||||||| || | |||||| Sbjct 783 AAGAAGAGAGGTATGATGCCCGGGTTGACCTTCTCCAACGAGTTGATCTGCAGAGACGAA 724 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTCAG 22929 ||| | ||| |||||||| ||| || |||| || || ||||| ||| | Sbjct 723 GGTTTGCACACCGACTTTGCCTGTTTGTTGTTCGCCCATTTGAAGAACAAGCCGGACCCA 664 Query 22930 GACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAAGAG 22989 | | | | ||||| | | || ||||| || || || | ||||| ||| Sbjct 663 GCCATCGTCGAGAAAATCGTCACCGAGGCCGTCGAGATCGAACAAAGATACTTCCTAGAC 604 Query 22990 GCACT-AAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTACATACAGTT 23048 || | || | || | || ||||||||| ||| |||| | |||| | |||| Sbjct 603 GCCTTGCCAGTC-GCCTTGCTAGGTATGAATGCCGACTTGATGAACCAGTACGTCGAGTT 545 Query 23049 TGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAATCC 23108 || ||||| | ||| | | ||| | ||| | ||| || || || | ||| || Sbjct 544 CGTCGCAGACAGACTGTTGGTCGCCTTCGGTAACAAGAAGTACTACAAGGTCGACAACCC 485 Query 23109 ATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAA 23160 || ||||||||||| |||||| | | | ||||| || |||||||| ||| Sbjct 484 CTTCGATTTCATGGAAAACATTTCCTTGGCCGGTAAGACCAACTTCTTCGAA 433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356194877296357