Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq7783 107 2e-18
seq2811 105 7e-18
seq8071 104 2e-17
seq4483 84.2 2e-11
>seq7783
Length=540
Score = 107 bits (118), Expect = 2e-18
Identities = 158/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||||||||| ||||| | ||| ||||| || || ||||| || |||
Sbjct 224 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 165
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||| |||||||| || || ||| |||| || || ||||||||||| ||
Sbjct 164 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGG 105
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|||||||| ||||| ||| || || | | || | ||||| | || ||| |||
Sbjct 104 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 45
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTG 139761
|| | ||| | ||||||||||| | || || || || || ||
Sbjct 44 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTG 1
>seq2811
Length=58406
Score = 105 bits (116), Expect = 7e-18
Identities = 154/215 (72%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 139552 CAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTC 139611
||| || | ||||| |||||||| || |||||||||||||| || || || |||
Sbjct 26983 CAACACAAGGTGAAGAGTAGACTCCTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 27042
Query 139612 TTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671
||| || || ||||| ||| | |||| | ||| ||||| ||||| || ||||| |||||
Sbjct 27043 TTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 27102
Query 139672 GGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCG 139730
||| |||| | || | | || | ||||||| | || ||||| | ||| | |
Sbjct 27103 -TTGAATTTTCGACTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAG 27161
Query 139731 TCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||| || || | ||||| ||||| |||||||||
Sbjct 27162 TCTTCCCTGTTAGAGTTTTGACGAAAATTTGCATA 27196
>seq8071
Length=459
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| | ||| ||||| | |||||||| || || ||||| || ||
Sbjct 208 CCACCACGAAGACGGAGAACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAA 267
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| || || ||||| || || ||| |||| ||||| ||||| || |||||
Sbjct 268 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGA 327
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
||||| || ||||| ||| || || | | || | ||||||| | ||| |||
Sbjct 328 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAACC 387
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | ||| | |||||||||||||| || || ||||| ||||||||
Sbjct 388 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAAATTTGCAT 434
>seq4483
Length=688
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620
||||| || ||||| || || ||||| || ||| | |||| ||| ||||||||
Sbjct 438 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTG 497
Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680
|| || || |||||| || ||||| ||||| || ||||| || ||||| ||| ||
Sbjct 498 CTTGCCTGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 557
Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
|| | | || | ||||||| | ||||||||||| ||| | ||||| || ||
Sbjct 558 GGTCTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTACCCGT 617
Query 139741 CAACGTTTTTACGAATATTTGCAT 139764
| || || ||||| || |||||
Sbjct 618 GAGGGTCTTGACGAAGATCTGCAT 641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496008695064800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |