Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_004745.1 Length=30728 Score E Sequences producing significant alignments: (Bits) Value seq1378 172 1e-38 >seq1378 Length=479 Score = 172 bits (190), Expect = 1e-38 Identities = 290/415 (70%), Gaps = 16/415 (4%) Strand=Plus/Plus Query 22158 CTGTTGTTTCTCAAAGCGGGGCAGGGGGTGACGGCCAGCGGTaaaaaaaaCCCGCAGGTC 22217 ||| ||||||| ||||| || || ||||||||||||||| | || ||| | Sbjct 69 CTGCTGTTTCTGCGTCCGGGGAGCGGCGTCACGGCCAGCGGTAAACCCATTCCACAGCTG 128 Query 22218 ACCATAACCCG-CAGCGACGGCGACCGCCA-TCATTTTGCGATTGCTGACCGTGGAGCCT 22275 || || || || ||| ||||| |||||||| | || || || |||||||| || || | Sbjct 129 ACGATTACACGACAG-GACGGTGACCGCCACACCTTCAGC-ATCGCTGACCGGGGCGCAT 186 Query 22276 ATACCGGCGTAACGGCAAAGTGGTTACACACCAAAGACCCGAAGCCACAAAAGCAGAAGG 22335 |||||||||| ||||| | ||| | || |||| ||| |||||||| | | |||| Sbjct 187 ATACCGGCGTGACGGCCAGCTGGCTGCATACCAGAGATCCGAAGCC------GAAAAAGG 240 Query 22336 TAAAACTGAAACGCAAAAAGAAAGAGAAACACCTGCGCGCACTGGAGCACCCGAAAGCGA 22395 |||| | |||||||| | ||| |||||||||||||| |||||||| || |||| Sbjct 241 TAAAGGTCAAACGCAAGCCGCGAGAAAAACACCTGCGCGCCTTGGAGCACACGGCGGCGA 300 Query 22396 AACCAGTCACGCAGAAGAAAGCGCCAAAAGTACCGGAAGCGCGCGAAGGTGAATACATGG 22455 || | | | ||| | ||||| |||||||| ||||| || || || ||| Sbjct 301 AA------AAGAAAAAGGTGGTTACAAAAACGCCGGAAGCACGCGAGGGGGATTATCTGG 354 Query 22456 CTGGTGAGGCTGACAACGTTTTTGCCCTGACCACGATATATGCCACGAAAGCGCAGGCCA 22515 | | | || ||||| ||| ||| ||||| | || |||| ||||| || | Sbjct 355 CCGCCACCGAAGATAACGTGTTTATGCTGCCCACGGTTTACGCCATCAAAGCCGCCGCGA 414 Query 22516 TGCGCGCCGCTCAGGCGAAGTGGGATAAACTGCAACGGGGCGTTGCGGAGTTCTC 22570 |||||||||| |||| || ||||| || ||||| ||||| ||||| ||||| || Sbjct 415 TGCGCGCCGCAAAGGCCAAATGGGACAAGCTGCAGCGGGGTGTTGCTGAGTTTTC 469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98197598483820