Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_004745.1
Length=30728
Score E
Sequences producing significant alignments: (Bits) Value
seq1378 172 1e-38
>seq1378
Length=479
Score = 172 bits (190), Expect = 1e-38
Identities = 290/415 (70%), Gaps = 16/415 (4%)
Strand=Plus/Plus
Query 22158 CTGTTGTTTCTCAAAGCGGGGCAGGGGGTGACGGCCAGCGGTaaaaaaaaCCCGCAGGTC 22217
||| ||||||| ||||| || || ||||||||||||||| | || ||| |
Sbjct 69 CTGCTGTTTCTGCGTCCGGGGAGCGGCGTCACGGCCAGCGGTAAACCCATTCCACAGCTG 128
Query 22218 ACCATAACCCG-CAGCGACGGCGACCGCCA-TCATTTTGCGATTGCTGACCGTGGAGCCT 22275
|| || || || ||| ||||| |||||||| | || || || |||||||| || || |
Sbjct 129 ACGATTACACGACAG-GACGGTGACCGCCACACCTTCAGC-ATCGCTGACCGGGGCGCAT 186
Query 22276 ATACCGGCGTAACGGCAAAGTGGTTACACACCAAAGACCCGAAGCCACAAAAGCAGAAGG 22335
|||||||||| ||||| | ||| | || |||| ||| |||||||| | | ||||
Sbjct 187 ATACCGGCGTGACGGCCAGCTGGCTGCATACCAGAGATCCGAAGCC------GAAAAAGG 240
Query 22336 TAAAACTGAAACGCAAAAAGAAAGAGAAACACCTGCGCGCACTGGAGCACCCGAAAGCGA 22395
|||| | |||||||| | ||| |||||||||||||| |||||||| || ||||
Sbjct 241 TAAAGGTCAAACGCAAGCCGCGAGAAAAACACCTGCGCGCCTTGGAGCACACGGCGGCGA 300
Query 22396 AACCAGTCACGCAGAAGAAAGCGCCAAAAGTACCGGAAGCGCGCGAAGGTGAATACATGG 22455
|| | | | ||| | ||||| |||||||| ||||| || || || |||
Sbjct 301 AA------AAGAAAAAGGTGGTTACAAAAACGCCGGAAGCACGCGAGGGGGATTATCTGG 354
Query 22456 CTGGTGAGGCTGACAACGTTTTTGCCCTGACCACGATATATGCCACGAAAGCGCAGGCCA 22515
| | | || ||||| ||| ||| ||||| | || |||| ||||| || |
Sbjct 355 CCGCCACCGAAGATAACGTGTTTATGCTGCCCACGGTTTACGCCATCAAAGCCGCCGCGA 414
Query 22516 TGCGCGCCGCTCAGGCGAAGTGGGATAAACTGCAACGGGGCGTTGCGGAGTTCTC 22570
|||||||||| |||| || ||||| || ||||| ||||| ||||| ||||| ||
Sbjct 415 TGCGCGCCGCAAAGGCCAAATGGGACAAGCTGCAGCGGGGTGTTGCTGAGTTTTC 469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 98197598483820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |