Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_005056.1 Length=32684 Score E Sequences producing significant alignments: (Bits) Value seq1378 172 1e-38 >seq1378 Length=479 Score = 172 bits (190), Expect = 1e-38 Identities = 290/415 (70%), Gaps = 16/415 (4%) Strand=Plus/Plus Query 21527 CTGTTGTTTCTCAAAGCGGGGCAGGGGGTGACGGCCAGTGGTaaaaaaaTCCCGCAGATT 21586 ||| ||||||| ||||| || || |||||||| |||||| || || ||| | Sbjct 69 CTGCTGTTTCTGCGTCCGGGGAGCGGCGTCACGGCCAGCGGTAAACCCATTCCACAGCTG 128 Query 21587 ACCATCACCCG-CAGCGACGGCGACCGTCAT-CATTTTGCGATTGCTGACCGTGGAGCTT 21644 || || || || ||| ||||| ||||| || | || || || |||||||| || || | Sbjct 129 ACGATTACACGACAG-GACGGTGACCGCCACACCTTCAGC-ATCGCTGACCGGGGCGCAT 186 Query 21645 ACACCGGCGTAACGGCAAAGTGGTTACACACAAAAGACCCGAAGCCGCAAAAGCAGAAGG 21704 | |||||||| ||||| | ||| | || || | ||| ||||||||| ||||| | Sbjct 187 ATACCGGCGTGACGGCCAGCTGGCTGCATACCAGAGATCCGAAGCCGAAAAAG------G 240 Query 21705 TAAATCTGAAACGCAAAAAGAAAGAGAAACACCTGCGCGCACTGGAGCACCCGAAAGCGA 21764 |||| | |||||||| | ||| |||||||||||||| |||||||| || |||| Sbjct 241 TAAAGGTCAAACGCAAGCCGCGAGAAAAACACCTGCGCGCCTTGGAGCACACGGCGGCGA 300 Query 21765 AACCAGTCACGCAGAAGAAAGCGCCAAAAGTACCGGAAGCGCGCGAAGGTGAATACATGG 21824 || | | | ||| | ||||| |||||||| ||||| || || || ||| Sbjct 301 AA------AAGAAAAAGGTGGTTACAAAAACGCCGGAAGCACGCGAGGGGGATTATCTGG 354 Query 21825 CAGGTGAGGCTGACAACGTTTTTGCCCTGACCACGGTATATGCCACGAAAGCGCAGGCCA 21884 | | | || ||||| ||| ||| ||||||| || |||| ||||| || | Sbjct 355 CCGCCACCGAAGATAACGTGTTTATGCTGCCCACGGTTTACGCCATCAAAGCCGCCGCGA 414 Query 21885 TGCGCGCCGCTCAGGCGAAGTGGGATAAGCTGCAACGGGGCGTTGCGGAGTTCTC 21939 |||||||||| |||| || ||||| |||||||| ||||| ||||| ||||| || Sbjct 415 TGCGCGCCGCAAAGGCCAAATGGGACAAGCTGCAGCGGGGTGTTGCTGAGTTTTC 469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104456135552388