Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_005284.1 Length=54865 Score E Sequences producing significant alignments: (Bits) Value seq1118 100 1e-16 >seq1118 Length=545 Score = 100 bits (110), Expect = 1e-16 Identities = 272/410 (66%), Gaps = 6/410 (1%) Strand=Plus/Minus Query 22332 AACGATATCAACGGCGAGCTGGTGAACCTGTATCGCGTCGTTCAGCACCATCTCGAAGAG 22391 |||||||||||| | || | || |||||||| | || | ||| ||||||| |||||| Sbjct 545 AACGATATCAACAGTGATATCGTTAACCTGTACAGGGTAATCCAGAACCATCTGGAAGAG 486 Query 22392 TTCGTGCGTCAGTTCAAATGGGCGCTGACGAGCCGGCAGGTGTTCGAGTGGCTGAAGCAT 22451 || | ||||| |||||||| | || ||||| | | ||| |||| || ||| || Sbjct 485 TTTATAAAGCAGTTTAAATGGGCTTTAACCAGCCGCGAAATATTCCAGTGTCTCAAGGAT 426 Query 22452 ACGGTCCCGGAAACCCTCACCGACATCCAGCGTGCGGCACGCTTCTACTACCTGCAAAAA 22511 || ||| ||||| || || || || ||||||||||| | || || || || || ||| Sbjct 425 ACTCCCCCTGAAACGCTGACTGATATACAGCGTGCGGCCAGATTTTATTATCTACAGAAA 366 Query 22512 AGTTGCTTTGGCGGGAAGCTTGAAGGGCAGACGTTCGGAACGGCGACGACTACGGTGC-C 22570 | || || | ||| | || || | || || || || |||| | | | | Sbjct 365 TTATCTTTCGGGGCCAAGGTCGAGGGACGAACATTTGGCACCAATGCGAC-AGGCCCCTC 307 Query 22571 GGGCCTGAACCTGCTGCGCATCGAAGAAGAGCTATCGGCGGCGCACATTCGTCTCGCGAA 22630 | | |||||||| || | |||||| ||| || | ||| | || | || | Sbjct 306 GAAATTAAACCTGCTACGGCTGGAAGAAACGCTGTCAGAGGC-CTGGTTGCGGTTGC-AC 249 Query 22631 TGCGTA--CATCGAGCGGCTCGATTGGGCGACCTGCATCGATCGTTACGATCGGCCGCAC 22688 | ||| || |||| || || ||| || ||||| ||||| || |||| || Sbjct 248 CGGGTAACAATAGAGCATCTGGACTGGAAAACATGCATAACCCGTTATGACAGGCCTGAC 189 Query 22689 ACGCTGTTCTACCTTGATCCGCCGTACTTCGAGACTGAAGGGTACGGCGT 22738 |||||||| |||||||| |||||||||| | || ||| |||||||| Sbjct 188 ACGCTGTTTTACCTTGACCCGCCGTACTGGCAAACGCCAGGTTACGGCGT 139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175427817923506