Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_005284.1
Length=54865
Score E
Sequences producing significant alignments: (Bits) Value
seq1118 100 1e-16
>seq1118
Length=545
Score = 100 bits (110), Expect = 1e-16
Identities = 272/410 (66%), Gaps = 6/410 (1%)
Strand=Plus/Minus
Query 22332 AACGATATCAACGGCGAGCTGGTGAACCTGTATCGCGTCGTTCAGCACCATCTCGAAGAG 22391
|||||||||||| | || | || |||||||| | || | ||| ||||||| ||||||
Sbjct 545 AACGATATCAACAGTGATATCGTTAACCTGTACAGGGTAATCCAGAACCATCTGGAAGAG 486
Query 22392 TTCGTGCGTCAGTTCAAATGGGCGCTGACGAGCCGGCAGGTGTTCGAGTGGCTGAAGCAT 22451
|| | ||||| |||||||| | || ||||| | | ||| |||| || ||| ||
Sbjct 485 TTTATAAAGCAGTTTAAATGGGCTTTAACCAGCCGCGAAATATTCCAGTGTCTCAAGGAT 426
Query 22452 ACGGTCCCGGAAACCCTCACCGACATCCAGCGTGCGGCACGCTTCTACTACCTGCAAAAA 22511
|| ||| ||||| || || || || ||||||||||| | || || || || || |||
Sbjct 425 ACTCCCCCTGAAACGCTGACTGATATACAGCGTGCGGCCAGATTTTATTATCTACAGAAA 366
Query 22512 AGTTGCTTTGGCGGGAAGCTTGAAGGGCAGACGTTCGGAACGGCGACGACTACGGTGC-C 22570
| || || | ||| | || || | || || || || |||| | | | |
Sbjct 365 TTATCTTTCGGGGCCAAGGTCGAGGGACGAACATTTGGCACCAATGCGAC-AGGCCCCTC 307
Query 22571 GGGCCTGAACCTGCTGCGCATCGAAGAAGAGCTATCGGCGGCGCACATTCGTCTCGCGAA 22630
| | |||||||| || | |||||| ||| || | ||| | || | || |
Sbjct 306 GAAATTAAACCTGCTACGGCTGGAAGAAACGCTGTCAGAGGC-CTGGTTGCGGTTGC-AC 249
Query 22631 TGCGTA--CATCGAGCGGCTCGATTGGGCGACCTGCATCGATCGTTACGATCGGCCGCAC 22688
| ||| || |||| || || ||| || ||||| ||||| || |||| ||
Sbjct 248 CGGGTAACAATAGAGCATCTGGACTGGAAAACATGCATAACCCGTTATGACAGGCCTGAC 189
Query 22689 ACGCTGTTCTACCTTGATCCGCCGTACTTCGAGACTGAAGGGTACGGCGT 22738
|||||||| |||||||| |||||||||| | || ||| ||||||||
Sbjct 188 ACGCTGTTTTACCTTGACCCGCCGTACTGGCAAACGCCAGGTTACGGCGT 139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 175427817923506
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |