Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_005340.1
Length=30636
Score E
Sequences producing significant alignments: (Bits) Value
seq1378 196 9e-46
>seq1378
Length=479
Score = 196 bits (216), Expect = 9e-46
Identities = 289/402 (72%), Gaps = 27/402 (7%)
Strand=Plus/Plus
Query 20677 ACGGCCAGCGGTAAGCCCATTCCACAAATGACGCTGACCCG-CAGTGACGGCGACCGTCA 20735
|||||||||||||| ||||||||||| ||||| | || || ||| ||||| ||||| ||
Sbjct 99 ACGGCCAGCGGTAAACCCATTCCACAGCTGACGATTACACGACAG-GACGGTGACCGCCA 157
Query 20736 TCAGTTTGCCATTGCCGACCGCGGAGCTTATACCGGTGTAACAGCTAAATGGTTGCACAC 20795
|| ||| || ||||| || || |||||||| || || || | ||| |||| ||
Sbjct 158 CACCTTCAGCATCGCTGACCGGGGCGCATATACCGGCGTGACGGCCAGCTGGCTGCATAC 217
Query 20796 CAAAGACCCGAAGCCGCAAAAACAGAAAGTGACGCTGAAACGCCAGCCAAAAGAGAAGCA 20855
|| ||| ||||||||| |||| || | | | |||||| |||| ||| || ||
Sbjct 218 CAGAGATCCGAAGCCGAAAAAG------GTAAAGGTCAAACGCAAGCCGCGAGAAAAACA 271
Query 20856 CCTGCGTGCGCTGGAGCACCCGAAAGCAAAGCCGGTCAGCAAAAAGACAAAGGCC----C 20911
|||||| || |||||||| || || | || ||||||| ||||| |
Sbjct 272 CCTGCGCGCCTTGGAGCACACG---GC---GGCG------AAAAAGAAAAAGGTGGTTAC 319
Query 20912 AAAAAGAGCATGAAGCCCGCGAGGGTGAGTATATGGCCGGTGAGGCCGATAACGTGCTGG 20971
||||| || ||||| |||||||| || ||| |||||| | ||||||||| |
Sbjct 320 AAAAAC-GCCGGAAGCACGCGAGGGGGATTATCTGGCCGCCACCGAAGATAACGTGTTTA 378
Query 20972 CGCTGACGACGGTCTACGCT-TCTAAGGCGCAGGCGATGCGCGCCGCTCAGGCTAAGTGG 21030
|||| | ||||| ||||| || ||| ||| | ||||||||||||| |||| || |||
Sbjct 379 TGCTGCCCACGGTTTACGCCATCAAAGCCGCCG-CGATGCGCGCCGCAAAGGCCAAATGG 437
Query 21031 GATAAGCTGCAGCGAGGCGTTGCGGAGTTTTCAATTACGCTG 21072
|| ||||||||||| || ||||| |||||||| | ||||||
Sbjct 438 GACAAGCTGCAGCGGGGTGTTGCTGAGTTTTCGCTGACGCTG 479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97903229664644
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |