Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_005340.1 Length=30636 Score E Sequences producing significant alignments: (Bits) Value seq1378 196 9e-46 >seq1378 Length=479 Score = 196 bits (216), Expect = 9e-46 Identities = 289/402 (72%), Gaps = 27/402 (7%) Strand=Plus/Plus Query 20677 ACGGCCAGCGGTAAGCCCATTCCACAAATGACGCTGACCCG-CAGTGACGGCGACCGTCA 20735 |||||||||||||| ||||||||||| ||||| | || || ||| ||||| ||||| || Sbjct 99 ACGGCCAGCGGTAAACCCATTCCACAGCTGACGATTACACGACAG-GACGGTGACCGCCA 157 Query 20736 TCAGTTTGCCATTGCCGACCGCGGAGCTTATACCGGTGTAACAGCTAAATGGTTGCACAC 20795 || ||| || ||||| || || |||||||| || || || | ||| |||| || Sbjct 158 CACCTTCAGCATCGCTGACCGGGGCGCATATACCGGCGTGACGGCCAGCTGGCTGCATAC 217 Query 20796 CAAAGACCCGAAGCCGCAAAAACAGAAAGTGACGCTGAAACGCCAGCCAAAAGAGAAGCA 20855 || ||| ||||||||| |||| || | | | |||||| |||| ||| || || Sbjct 218 CAGAGATCCGAAGCCGAAAAAG------GTAAAGGTCAAACGCAAGCCGCGAGAAAAACA 271 Query 20856 CCTGCGTGCGCTGGAGCACCCGAAAGCAAAGCCGGTCAGCAAAAAGACAAAGGCC----C 20911 |||||| || |||||||| || || | || ||||||| ||||| | Sbjct 272 CCTGCGCGCCTTGGAGCACACG---GC---GGCG------AAAAAGAAAAAGGTGGTTAC 319 Query 20912 AAAAAGAGCATGAAGCCCGCGAGGGTGAGTATATGGCCGGTGAGGCCGATAACGTGCTGG 20971 ||||| || ||||| |||||||| || ||| |||||| | ||||||||| | Sbjct 320 AAAAAC-GCCGGAAGCACGCGAGGGGGATTATCTGGCCGCCACCGAAGATAACGTGTTTA 378 Query 20972 CGCTGACGACGGTCTACGCT-TCTAAGGCGCAGGCGATGCGCGCCGCTCAGGCTAAGTGG 21030 |||| | ||||| ||||| || ||| ||| | ||||||||||||| |||| || ||| Sbjct 379 TGCTGCCCACGGTTTACGCCATCAAAGCCGCCG-CGATGCGCGCCGCAAAGGCCAAATGG 437 Query 21031 GATAAGCTGCAGCGAGGCGTTGCGGAGTTTTCAATTACGCTG 21072 || ||||||||||| || ||||| |||||||| | |||||| Sbjct 438 GACAAGCTGCAGCGGGGTGTTGCTGAGTTTTCGCTGACGCTG 479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97903229664644