Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_005344.1 Length=39043 Score E Sequences producing significant alignments: (Bits) Value seq3651 439 6e-119 >seq3651 Length=7586 Score = 439 bits (486), Expect = 6e-119 Identities = 873/1273 (69%), Gaps = 50/1273 (4%) Strand=Plus/Plus Query 32879 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTCCAGTATCGATTTTCCGAT 32938 || |||||||||| || ||||||||| | ||||| | | |||| | || ||| Sbjct 3659 TGTAGTGGTCAACTAATACTGGCCACAGCATTAGACTGTAAGTAGTACAGCCGCTCAGAT 3718 Query 32939 TCGTTTGGGGGTAACCCACCGTTATATTCGTGCGGTCTTAGTGCACTGTAATATCCAACG 32998 ||||| || | | | |||||||| ||| || || | || ||||||||||| Sbjct 3719 TCGTTGGGCGTCAGACTGCCGTTATACCAGTGGGGCCTGATAGCGCTGTAATATCCCGTT 3778 Query 32999 ATATAGTCCGTTATGGCG---TGAGCTGCCTCGCTGAAGCTTACGTAACCCACCACCGGC 33055 |||||| |||| ||| || ||| ||||||||||| || ||| | |||| Sbjct 3779 ATATAGCGGATTATCGCGCCCTGGGCT---TCGCTGAAGCTGTTATAGCCCTTCGTCGGC 3835 Query 33056 ATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTT 33115 | ||||||| ||||||| |||| |||||| || ||||| ||| |||||||||||||||| Sbjct 3836 ACCCATTCGGTCTTCAGGCTCCGGAAGAACCGCTCCATAGGGGCGTTATCCCAGCAGTTT 3895 Query 33116 CCGCGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTG 33175 || || || ||||||||||| | ||| | ||||||| |||||| | | | Sbjct 3896 CCCCGTCGACTCATACTCTGCTTTATCCTACAGCGCCACAGCGCCTGCCGATATCTACGG 3955 Query 33176 CTCGTATAATGACTGCCCTGATCGCTGTGGAACATCACCCCGCCGGGCTTACCACGGGTT 33235 || ||||| | |||||||| |||||||||||| ||| | |||||||| || Sbjct 3956 CTGGTATAGGGGCTGCCCTGGTCGCTGTGGAACGCCACGTCTGTTGGCTTACCCCGAAGC 4015 Query 33236 TCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGC--TGTCCGGCGAGAACGACATGG 33293 ||||| ||||| | || |||||| | || || ||| |||||| || |||||||| Sbjct 4016 TCCCAGGCCATCTGCAACGCTTTGACCGTCAG--TGCCGAGTCCGGTGACGTCGACATGG 4073 Query 33294 CCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCAGCGCT 33353 |||||||||| ||||| | ||| |||| ||| || || || || || || ||||||| | Sbjct 4074 CCCAGCCCACCGGTTTACGTGCAAACAAGTCCAGCACCACCGCCAGATAAGCCCAGCATT 4133 Query 33354 TACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCACGGCGA 33413 |||||||||||||||| |||||||| |||||||| ||||| | ||| |||| || |||| Sbjct 4134 TACCCGTCCAGATATAAGTCACATCGCCGCACCAGACCTGGTCCGGCCCGGTAACCGCGA 4193 Query 33414 ACTGCCTTTCAAGGTAGTTAGGGATAGCAACATGTTCATGACCACCACGTTTATACCGGT 33473 |||| | || || | ||| || || |||| ||||| | || || ||||| || || Sbjct 4194 ACTGGCGGTCGAGATGGTTCGGTATCTCAACGTGTTCGTTTCCGCCGCGTTTGTATTTGT 4253 Query 33474 GAGTCGGCT-GCTGACAGCTGACCAGCCCCAGCTCTTTCATGAGCCTGCCAGCAAGCCAG 33532 | | | ||| ||| || ||| | | |||||||||||| ||| | || |||||| Sbjct 4254 GCG-CTGCTATCTGGCAACTGGCGATATTCAGCTCTTTCATCAGCTTACC----AGCCAG 4308 Query 33533 CGTCCCATCTGGTAGCC--TCTCCGGGTTG-CCATTGTGGCGATGCTTCTTGCTCCGGCC 33589 || ||||| | | ||| ||| | || | || | ||||| |||| || ||||| Sbjct 4309 CGGCCCATTTTGACGCCAGAGTCCCTGCTGACGATGGCAGCGATACTTCGGGCGCCGGCA 4368 Query 33590 GAACCGTGGCTG--ATGCCATGTAGCTCAAGTACCTGACTGCGTAATACAGCCCGTCTGC 33647 || ||| |||| | ||| | ||| | |||| || || || | ||| || Sbjct 4369 GAGCCGCCGCTGGCGTTCCAGG--CCTCCATGACCTTGCTACGCTTGACCACACGTTCGC 4426 Query 33648 CGTCTGGTT--TT---TCAGGACGGTTTTTCCAGTATCTGTAGCTGCTGCGATGAACCCC 33702 |||| || | || | | | ||| ||||| ||||||||||||||||| || | Sbjct 4427 CGTCAGGCTCATTCGCTGAAGCCGG-----CCAGTGCCTGTAGCTGCTGCGATGGACGTC 4481 Query 33703 GAACACATGGCAGAGTGTGACCACAGGATAATGCGCTCTGAGTTTCCCGATTATCGAGAA 33762 || ||||| | | | || ||||| |||||| || | ||| || || ||| Sbjct 4482 AAAAGTCTGGCACAACGCAGCGACCGGATACCTCGCTCTTAGCCTGTCGACTACCGTGAA 4541 Query 33763 CTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTTCATTCTCCATT 33822 | ||| || | ||| ||||| |||||||| ||||||||||||| ||||| ||||||||| Sbjct 4542 CCGTTGAGTGCGTCCGACATTAAGAGCGCCGTAGCCTTTTTTAGGATTTCGTTCTCCATT 4601 Query 33823 TCAATGCGTTGTAGCTTTTTCCTGAGCTCACGGATTTCAATTTGTTCCGGGGTAATGGGG 33882 |||| |||||||| || ||||| |||||| | || | ||||| || || | | | Sbjct 4602 TCAAGGCGTTGTATTTTCTTCCTCGCCTCACGCAGCTCGAGCTGTTCTGGCGTCA--GAG 4659 Query 33883 GAGG--CTTTTGGTGTTTTGCCCTGACGCTCATCACGCAGTTGTTTGACCCATCTTGTCA 33940 |||| | || ||||| ||||| |||||| ||||| | || ||||| | | | Sbjct 4660 GAGGCCCGGCGGGCGTTTTCCCCTGGCGCTCAAGTCGCAGCTTATTCACCCAACGGGGGA 4719 Query 33941 TTGTGGAAAGGCCAACATCCATAGCTTTGGCGGCATCTGCCACCGT--GTATTTC--TGG 33996 | | ||| ||| || | | || | ||||| | | ||| |||| | ||| Sbjct 4720 TAGCCGAATGGCTTACGTTAACTGCCTCTGCGGCCT----TAACGTAGGTATAGCCGTGG 4775 Query 33997 TCAACAACCAGTTGAGCGGATTCGCGTTTAAACTCTGCGCTAAAATTTCtttttttCATT 34056 || ||||| | | || | ||| | ||||| || | | ||| ||| |||| Sbjct 4776 TCGACAACTAACTTCGCCGCTTCAAGCTTAAATTCCGGCGTGGAAT---GTTTAGCCATT 4832 Query 34057 GGAGCACCTGTGTTGTTCTG-AGGTGAGCATATCACC-TCTGTTCAGGTGGCCAAATTCA 34114 || |||||||| |||| | ||||||| |||||||| || | ||||||| ||| ||| Sbjct 4833 GGGTCACCTGTGGTGTTGGGAAGGTGAGAATATCACCTTCCGATCAGGTGACCAGTATCA 4892 Query 34115 GTGTGCCACTTCA 34127 |||| ||||| || Sbjct 4893 GTGTACCACTACA 4905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124802780347390