Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_005344.1
Length=39043
Score E
Sequences producing significant alignments: (Bits) Value
seq3651 439 6e-119
>seq3651
Length=7586
Score = 439 bits (486), Expect = 6e-119
Identities = 873/1273 (69%), Gaps = 50/1273 (4%)
Strand=Plus/Plus
Query 32879 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTCCAGTATCGATTTTCCGAT 32938
|| |||||||||| || ||||||||| | ||||| | | |||| | || |||
Sbjct 3659 TGTAGTGGTCAACTAATACTGGCCACAGCATTAGACTGTAAGTAGTACAGCCGCTCAGAT 3718
Query 32939 TCGTTTGGGGGTAACCCACCGTTATATTCGTGCGGTCTTAGTGCACTGTAATATCCAACG 32998
||||| || | | | |||||||| ||| || || | || |||||||||||
Sbjct 3719 TCGTTGGGCGTCAGACTGCCGTTATACCAGTGGGGCCTGATAGCGCTGTAATATCCCGTT 3778
Query 32999 ATATAGTCCGTTATGGCG---TGAGCTGCCTCGCTGAAGCTTACGTAACCCACCACCGGC 33055
|||||| |||| ||| || ||| ||||||||||| || ||| | ||||
Sbjct 3779 ATATAGCGGATTATCGCGCCCTGGGCT---TCGCTGAAGCTGTTATAGCCCTTCGTCGGC 3835
Query 33056 ATCCATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTT 33115
| ||||||| ||||||| |||| |||||| || ||||| ||| ||||||||||||||||
Sbjct 3836 ACCCATTCGGTCTTCAGGCTCCGGAAGAACCGCTCCATAGGGGCGTTATCCCAGCAGTTT 3895
Query 33116 CCGCGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTG 33175
|| || || ||||||||||| | ||| | ||||||| |||||| | | |
Sbjct 3896 CCCCGTCGACTCATACTCTGCTTTATCCTACAGCGCCACAGCGCCTGCCGATATCTACGG 3955
Query 33176 CTCGTATAATGACTGCCCTGATCGCTGTGGAACATCACCCCGCCGGGCTTACCACGGGTT 33235
|| ||||| | |||||||| |||||||||||| ||| | |||||||| ||
Sbjct 3956 CTGGTATAGGGGCTGCCCTGGTCGCTGTGGAACGCCACGTCTGTTGGCTTACCCCGAAGC 4015
Query 33236 TCCCATGCCATTTCCAGCGCTTTCATGGTGAGCCTGC--TGTCCGGCGAGAACGACATGG 33293
||||| ||||| | || |||||| | || || ||| |||||| || ||||||||
Sbjct 4016 TCCCAGGCCATCTGCAACGCTTTGACCGTCAG--TGCCGAGTCCGGTGACGTCGACATGG 4073
Query 33294 CCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGGTACGCCCAGCGCT 33353
|||||||||| ||||| | ||| |||| ||| || || || || || || ||||||| |
Sbjct 4074 CCCAGCCCACCGGTTTACGTGCAAACAAGTCCAGCACCACCGCCAGATAAGCCCAGCATT 4133
Query 33354 TACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGCTCGGTCACGGCGA 33413
|||||||||||||||| |||||||| |||||||| ||||| | ||| |||| || ||||
Sbjct 4134 TACCCGTCCAGATATAAGTCACATCGCCGCACCAGACCTGGTCCGGCCCGGTAACCGCGA 4193
Query 33414 ACTGCCTTTCAAGGTAGTTAGGGATAGCAACATGTTCATGACCACCACGTTTATACCGGT 33473
|||| | || || | ||| || || |||| ||||| | || || ||||| || ||
Sbjct 4194 ACTGGCGGTCGAGATGGTTCGGTATCTCAACGTGTTCGTTTCCGCCGCGTTTGTATTTGT 4253
Query 33474 GAGTCGGCT-GCTGACAGCTGACCAGCCCCAGCTCTTTCATGAGCCTGCCAGCAAGCCAG 33532
| | | ||| ||| || ||| | | |||||||||||| ||| | || ||||||
Sbjct 4254 GCG-CTGCTATCTGGCAACTGGCGATATTCAGCTCTTTCATCAGCTTACC----AGCCAG 4308
Query 33533 CGTCCCATCTGGTAGCC--TCTCCGGGTTG-CCATTGTGGCGATGCTTCTTGCTCCGGCC 33589
|| ||||| | | ||| ||| | || | || | ||||| |||| || |||||
Sbjct 4309 CGGCCCATTTTGACGCCAGAGTCCCTGCTGACGATGGCAGCGATACTTCGGGCGCCGGCA 4368
Query 33590 GAACCGTGGCTG--ATGCCATGTAGCTCAAGTACCTGACTGCGTAATACAGCCCGTCTGC 33647
|| ||| |||| | ||| | ||| | |||| || || || | ||| ||
Sbjct 4369 GAGCCGCCGCTGGCGTTCCAGG--CCTCCATGACCTTGCTACGCTTGACCACACGTTCGC 4426
Query 33648 CGTCTGGTT--TT---TCAGGACGGTTTTTCCAGTATCTGTAGCTGCTGCGATGAACCCC 33702
|||| || | || | | | ||| ||||| ||||||||||||||||| || |
Sbjct 4427 CGTCAGGCTCATTCGCTGAAGCCGG-----CCAGTGCCTGTAGCTGCTGCGATGGACGTC 4481
Query 33703 GAACACATGGCAGAGTGTGACCACAGGATAATGCGCTCTGAGTTTCCCGATTATCGAGAA 33762
|| ||||| | | | || ||||| |||||| || | ||| || || |||
Sbjct 4482 AAAAGTCTGGCACAACGCAGCGACCGGATACCTCGCTCTTAGCCTGTCGACTACCGTGAA 4541
Query 33763 CTGTTCAGGGAGTCTGACATCAAGAGCGCGGTAGCCTTTTTTAATATTTCATTCTCCATT 33822
| ||| || | ||| ||||| |||||||| ||||||||||||| ||||| |||||||||
Sbjct 4542 CCGTTGAGTGCGTCCGACATTAAGAGCGCCGTAGCCTTTTTTAGGATTTCGTTCTCCATT 4601
Query 33823 TCAATGCGTTGTAGCTTTTTCCTGAGCTCACGGATTTCAATTTGTTCCGGGGTAATGGGG 33882
|||| |||||||| || ||||| |||||| | || | ||||| || || | | |
Sbjct 4602 TCAAGGCGTTGTATTTTCTTCCTCGCCTCACGCAGCTCGAGCTGTTCTGGCGTCA--GAG 4659
Query 33883 GAGG--CTTTTGGTGTTTTGCCCTGACGCTCATCACGCAGTTGTTTGACCCATCTTGTCA 33940
|||| | || ||||| ||||| |||||| ||||| | || ||||| | | |
Sbjct 4660 GAGGCCCGGCGGGCGTTTTCCCCTGGCGCTCAAGTCGCAGCTTATTCACCCAACGGGGGA 4719
Query 33941 TTGTGGAAAGGCCAACATCCATAGCTTTGGCGGCATCTGCCACCGT--GTATTTC--TGG 33996
| | ||| ||| || | | || | ||||| | | ||| |||| | |||
Sbjct 4720 TAGCCGAATGGCTTACGTTAACTGCCTCTGCGGCCT----TAACGTAGGTATAGCCGTGG 4775
Query 33997 TCAACAACCAGTTGAGCGGATTCGCGTTTAAACTCTGCGCTAAAATTTCtttttttCATT 34056
|| ||||| | | || | ||| | ||||| || | | ||| ||| ||||
Sbjct 4776 TCGACAACTAACTTCGCCGCTTCAAGCTTAAATTCCGGCGTGGAAT---GTTTAGCCATT 4832
Query 34057 GGAGCACCTGTGTTGTTCTG-AGGTGAGCATATCACC-TCTGTTCAGGTGGCCAAATTCA 34114
|| |||||||| |||| | ||||||| |||||||| || | ||||||| ||| |||
Sbjct 4833 GGGTCACCTGTGGTGTTGGGAAGGTGAGAATATCACCTTCCGATCAGGTGACCAGTATCA 4892
Query 34115 GTGTGCCACTTCA 34127
|||| ||||| ||
Sbjct 4893 GTGTACCACTACA 4905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124802780347390
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |