Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2288 210 3e-50 seq8099 170 3e-38 seq7651 152 8e-33 seq3389 152 8e-33 seq4702 150 3e-32 seq2314 122 1e-23 seq2908 113 7e-21 seq3612 111 2e-20 seq2616 95.1 2e-15 >seq2288 Length=439 Score = 210 bits (232), Expect = 3e-50 Identities = 209/268 (78%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| |||||| || |||||||| || ||||||||||| ||||| Sbjct 138 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 196 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | ||||| |||||||||||||| ||||||||| |||| | || |||| || |||| Sbjct 197 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCAGCCATGATCTACGAGGAGAC 256 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| |||| | |||| |||||| || || |||| |||||| || ||| ||||| Sbjct 257 CCGTGGTGTTCTCAAGACCTTCCTTGAGGGTGTCATCCGTGATGCCGTCACCTACACCGA 316 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||||| || ||||||||||||||| | ||| | ||||| || | || |||||||| Sbjct 317 ACACGCTAAGCGCAAGACTGTCACCTCCCTCGATGTTGTCTACGCTCTCAAGCGTCAAGG 376 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||||| | || ||||| || ||||| Sbjct 377 CCGTACCCTCTACGGTTTCGGTGGTTAA 404 >seq8099 Length=383 Score = 170 bits (188), Expect = 3e-38 Identities = 203/273 (74%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||||||||||| ||| |||||| || |||||||| || ||||| ||||| || || Sbjct 347 GCCAAGCGTCATCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACGAAGCCTGCGAT 289 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| |||||||||||||| || |||||| |||||| || |||| || |||| Sbjct 288 CCGTCGTCTTGCTCGTCGTGGTGGTGTGAAGCGTATCTCTGCTATGATCTACGAGGAGAC 229 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | |||| | |||| |||| | | ||||| | ||||| || || || || Sbjct 228 GCGGGGTGTTCTCAAGACCTTCTTGGAAGGTGTTATTCGCGATGCAGTCACATACACAGA 169 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| || | ||| | || ||||| |||| | || || Sbjct 168 GCACGCCAAGCGCAAGACCGTCACTTCTCTCGATGTTGTTTATGCTCTGAAGAGACAGGG 109 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTC 16704 ||||| | || ||||| || ||||| |||| Sbjct 108 CCGTACTCTGTACGGTTTCGGTGGTTAAGCTTC 76 >seq7651 Length=544 Score = 152 bits (168), Expect = 8e-33 Identities = 182/246 (74%), Gaps = 1/246 (0%) Strand=Plus/Plus Query 16447 CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCG 16506 ||||||| | ||||| |||||||| || ||||||||||| |||||||| ||||| || || Sbjct 189 CAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTATCCGACGTCTCGCGCG 247 Query 16507 TCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAA 16566 ||||||||| ||||||||| ||||||| | |||| || |||| |||| ||| | || Sbjct 248 TCGTGGTGGTGTCAAGCGTATCTCTGGTCTCATCTACGACGAGACCCGTGGTGTGCTCAA 307 Query 16567 GATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626 | |||||||| || | || |||| || | || ||| || |||||||| || || || Sbjct 308 GCTCTTCCTCGAGTCGGTCATCCGCGACTCAGTCACCTACACTGAGCACGCCAAGCGCAA 367 Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGG 16686 ||| || || || | || | ||||| || | || || || ||||| | | || || Sbjct 368 GACCGTTACTTCGCTCGACGTTGTCTACGCTCTCAAGCGCCAGGGCCGCACCCTCTACGG 427 Query 16687 TTTTGG 16692 ||| || Sbjct 428 TTTCGG 433 >seq3389 Length=643 Score = 152 bits (168), Expect = 8e-33 Identities = 196/268 (73%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||| ||| || || |||||||| || || |||||||| || || Sbjct 112 GCCAAGCGCCACCGCAAGAT-TCTCCGTGACAACATCCAGGGTATTACCAAGCCTGCCAT 170 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | |||||||||||||||||||| ||||||||| | |||| || |||| || |||| Sbjct 171 CAGGCGTCTGGCTCGTCGTGGTGGTGTCAAGCGTATTTCTGCCATGATCTACGAGGAGAC 230 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || || | ||| |||||| || || |||| ||| ||| || ||| ||||| Sbjct 231 CCGCTCCGTCCTCAAGTCCTTCCTTGAGGGTGTCATCCGTGACGCTGTCACCTACACCGA 290 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| |||||||| | || | ||||| || | || || ||||| Sbjct 291 GCACGCCAAGCGCAAGACCGTCACCTCGTTAGACGTTGTCTACGCTCTCAAGCGCCAAGG 350 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | || ||||| || ||||| Sbjct 351 CCGCACCTTGTACGGTTTCGGTGGTTAA 378 >seq4702 Length=661 Score = 150 bits (166), Expect = 3e-32 Identities = 195/267 (73%), Gaps = 2/267 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| |||||| || || || || || ||||||||||| || || Sbjct 163 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAATATTCAGGGCATCACCAAGCCCGCCAT 221 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | |||||||||||||||||||| ||||||||| |||||| || |||| || |||| Sbjct 222 AAGGCGTCTGGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCTATGATCTACGAGGAGAC 281 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || ||| | ||| |||||| || || |||| ||| || || ||| || || Sbjct 282 CCGCTCTGTCCTCAAGTCCTTCCTTGAGGGTGTCATCCGTGACGCCGTCACCTACACTGA 341 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| |||||||| | || | ||||| || | || || ||||| Sbjct 342 GCACGCCAAGCGCAAGACAGTCACCTCTCTTGACGTTGTCTACGCCCTCAAGCGCCAAGG 401 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698 ||| | | || ||||| || |||| Sbjct 402 CCGCACTCTGTACGGTTTCGGTGGTTA 428 >seq2314 Length=250615 Score = 122 bits (134), Expect = 1e-23 Identities = 191/271 (70%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | | ||| ||| |||||||||| ||||| ||||| ||||||||||| Sbjct 211786 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 211728 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | ||||| | | ||||| ||||||||| |||| || || |||| ||||| | Sbjct 211727 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCCGGTTTAATCTACGAAGAAGT 211668 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| |||||| |||| | | |||| ||| || || | || || || Sbjct 211667 CAGAGCTGTCTTGAAGTCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACTGA 211608 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || | ||| | || ||||| ||||| | ||||| Sbjct 211607 ACACGCCAAGAGAAAGACTGTTACTTCTCTAGATGTTGTTTATGCTTTGAAGAGACAAGG 211548 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 | | | |||||||| || |||||||| Sbjct 211547 TAGAACCTTGTATGGTTTCGGTGGTTAATCT 211517 >seq2908 Length=69173 Score = 113 bits (124), Expect = 7e-21 Identities = 188/269 (70%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| ||| |||||||||||||||| || || ||||||||||| Sbjct 30375 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATCCAAGGTATTACTAAGCCAGCTAT 30317 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| | Sbjct 30316 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 30257 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| ||||| |||| | | |||| ||| || || | || ||||| Sbjct 30256 CAGAGCTGTCTTGAAATCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACCGA 30197 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || ||||| | || ||||| ||||| | ||||| Sbjct 30196 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 30137 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 | | | || ||||| || |||||| Sbjct 30136 TAGAACCTTATACGGTTTCGGTGGTTAAT 30108 >seq3612 Length=8526 Score = 111 bits (122), Expect = 2e-20 Identities = 187/268 (70%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| ||| |||||||||| ||||| ||||| ||||||||||| Sbjct 2655 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 2713 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| | Sbjct 2714 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 2773 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | || ||||| |||| | | |||| ||| || || | || || || Sbjct 2774 CAGAGCCGTCTTGAAATCCTTCTTGGAATCCGTCATCAGGGACTCTGTTACTTACACTGA 2833 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || ||||| |||| ||||| ||||| | ||||| Sbjct 2834 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTCGTTTATGCTTTGAAGAGACAAGG 2893 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | |||||||| || ||||| Sbjct 2894 TAGAACCTTATATGGTTTCGGTGGTTAA 2921 >seq2616 Length=176567 Score = 95.1 bits (104), Expect = 2e-15 Identities = 166/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||||||||| ||||| ||||| |||||||||||| | | ||||| | | ||||| | Sbjct 2970 GAGATAACATTCAAGGTATCACTAAGCCAGCTATCAGAAGATTGGCTAGAAGAGGTGGTG 3029 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| |||| || || |||| ||||| | | | ||| |||||| ||| | Sbjct 3030 TCAAGCGTATCTCCGGTTTAATCTACGAAGAAGTCAGAGCTGTCTTGAAGTCCTTTTTGG 3089 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | |||| ||| || || | || || || ||||| || | |||||||| || | Sbjct 3090 AATCCGTCATCAGAGACTCTGTTACTTACACTGAACACGCCAAGAGAAAGACTGTTACTT 3149 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | | ||| | || || || ||||| | ||||| | | | || ||||| || ||| Sbjct 3150 CTCTAGATGTTGTTTACGCTTTGAAGAGACAAGGTAGAACCTTATACGGTTTCGGTGGTT 3209 Query 16698 AA 16699 || Sbjct 3210 AA 3211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79067045295867