Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq2288 210 3e-50
seq8099 170 3e-38
seq7651 152 8e-33
seq3389 152 8e-33
seq4702 150 3e-32
seq2314 122 1e-23
seq2908 113 7e-21
seq3612 111 2e-20
seq2616 95.1 2e-15
>seq2288
Length=439
Score = 210 bits (232), Expect = 3e-50
Identities = 209/268 (78%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || ||||||||||| |||||
Sbjct 138 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 196
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | ||||| |||||||||||||| ||||||||| |||| | || |||| || ||||
Sbjct 197 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCAGCCATGATCTACGAGGAGAC 256
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| |||| | |||| |||||| || || |||| |||||| || ||| |||||
Sbjct 257 CCGTGGTGTTCTCAAGACCTTCCTTGAGGGTGTCATCCGTGATGCCGTCACCTACACCGA 316
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||||| || ||||||||||||||| | ||| | ||||| || | || ||||||||
Sbjct 317 ACACGCTAAGCGCAAGACTGTCACCTCCCTCGATGTTGTCTACGCTCTCAAGCGTCAAGG 376
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||||| | || ||||| || |||||
Sbjct 377 CCGTACCCTCTACGGTTTCGGTGGTTAA 404
>seq8099
Length=383
Score = 170 bits (188), Expect = 3e-38
Identities = 203/273 (74%), Gaps = 2/273 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||||||||||| ||| |||||| || |||||||| || ||||| ||||| || ||
Sbjct 347 GCCAAGCGTCATCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACGAAGCCTGCGAT 289
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||| |||||||||||||| || |||||| |||||| || |||| || ||||
Sbjct 288 CCGTCGTCTTGCTCGTCGTGGTGGTGTGAAGCGTATCTCTGCTATGATCTACGAGGAGAC 229
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | |||| | |||| |||| | | ||||| | ||||| || || || ||
Sbjct 228 GCGGGGTGTTCTCAAGACCTTCTTGGAAGGTGTTATTCGCGATGCAGTCACATACACAGA 169
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| ||||| || | ||| | || ||||| |||| | || ||
Sbjct 168 GCACGCCAAGCGCAAGACCGTCACTTCTCTCGATGTTGTTTATGCTCTGAAGAGACAGGG 109
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTC 16704
||||| | || ||||| || ||||| ||||
Sbjct 108 CCGTACTCTGTACGGTTTCGGTGGTTAAGCTTC 76
>seq7651
Length=544
Score = 152 bits (168), Expect = 8e-33
Identities = 182/246 (74%), Gaps = 1/246 (0%)
Strand=Plus/Plus
Query 16447 CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCG 16506
||||||| | ||||| |||||||| || ||||||||||| |||||||| ||||| || ||
Sbjct 189 CAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCCGCTATCCGACGTCTCGCGCG 247
Query 16507 TCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAA 16566
||||||||| ||||||||| ||||||| | |||| || |||| |||| ||| | ||
Sbjct 248 TCGTGGTGGTGTCAAGCGTATCTCTGGTCTCATCTACGACGAGACCCGTGGTGTGCTCAA 307
Query 16567 GATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626
| |||||||| || | || |||| || | || ||| || |||||||| || || ||
Sbjct 308 GCTCTTCCTCGAGTCGGTCATCCGCGACTCAGTCACCTACACTGAGCACGCCAAGCGCAA 367
Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGG 16686
||| || || || | || | ||||| || | || || || ||||| | | || ||
Sbjct 368 GACCGTTACTTCGCTCGACGTTGTCTACGCTCTCAAGCGCCAGGGCCGCACCCTCTACGG 427
Query 16687 TTTTGG 16692
||| ||
Sbjct 428 TTTCGG 433
>seq3389
Length=643
Score = 152 bits (168), Expect = 8e-33
Identities = 196/268 (73%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || |||| ||| ||| || || |||||||| || || |||||||| || ||
Sbjct 112 GCCAAGCGCCACCGCAAGAT-TCTCCGTGACAACATCCAGGGTATTACCAAGCCTGCCAT 170
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | |||||||||||||||||||| ||||||||| | |||| || |||| || ||||
Sbjct 171 CAGGCGTCTGGCTCGTCGTGGTGGTGTCAAGCGTATTTCTGCCATGATCTACGAGGAGAC 230
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| || | ||| |||||| || || |||| ||| ||| || ||| |||||
Sbjct 231 CCGCTCCGTCCTCAAGTCCTTCCTTGAGGGTGTCATCCGTGACGCTGTCACCTACACCGA 290
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| |||||||| | || | ||||| || | || || |||||
Sbjct 291 GCACGCCAAGCGCAAGACCGTCACCTCGTTAGACGTTGTCTACGCTCTCAAGCGCCAAGG 350
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| | | || ||||| || |||||
Sbjct 351 CCGCACCTTGTACGGTTTCGGTGGTTAA 378
>seq4702
Length=661
Score = 150 bits (166), Expect = 3e-32
Identities = 195/267 (73%), Gaps = 2/267 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || || || || || ||||||||||| || ||
Sbjct 163 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAATATTCAGGGCATCACCAAGCCCGCCAT 221
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| |||||||||||||||||||| ||||||||| |||||| || |||| || ||||
Sbjct 222 AAGGCGTCTGGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCTATGATCTACGAGGAGAC 281
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| ||| | ||| |||||| || || |||| ||| || || ||| || ||
Sbjct 282 CCGCTCTGTCCTCAAGTCCTTCCTTGAGGGTGTCATCCGTGACGCCGTCACCTACACTGA 341
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||| |||||||| | || | ||||| || | || || |||||
Sbjct 342 GCACGCCAAGCGCAAGACAGTCACCTCTCTTGACGTTGTCTACGCCCTCAAGCGCCAAGG 401
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTA 16698
||| | | || ||||| || ||||
Sbjct 402 CCGCACTCTGTACGGTTTCGGTGGTTA 428
>seq2314
Length=250615
Score = 122 bits (134), Expect = 1e-23
Identities = 191/271 (70%), Gaps = 2/271 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | | ||| ||| |||||||||| ||||| ||||| |||||||||||
Sbjct 211786 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 211728
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||||| | | ||||| ||||||||| |||| || || |||| ||||| |
Sbjct 211727 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCCGGTTTAATCTACGAAGAAGT 211668
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| |||||| |||| | | |||| ||| || || | || || ||
Sbjct 211667 CAGAGCTGTCTTGAAGTCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACTGA 211608
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || | ||| | || ||||| ||||| | |||||
Sbjct 211607 ACACGCCAAGAGAAAGACTGTTACTTCTCTAGATGTTGTTTATGCTTTGAAGAGACAAGG 211548
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702
| | | |||||||| || ||||||||
Sbjct 211547 TAGAACCTTGTATGGTTTCGGTGGTTAATCT 211517
>seq2908
Length=69173
Score = 113 bits (124), Expect = 7e-21
Identities = 188/269 (70%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| ||| |||||||||||||||| || || |||||||||||
Sbjct 30375 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATCCAAGGTATTACTAAGCCAGCTAT 30317
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| |
Sbjct 30316 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 30257
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| ||||| |||| | | |||| ||| || || | || |||||
Sbjct 30256 CAGAGCTGTCTTGAAATCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACCGA 30197
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || ||||| | || ||||| ||||| | |||||
Sbjct 30196 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 30137
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
| | | || ||||| || ||||||
Sbjct 30136 TAGAACCTTATACGGTTTCGGTGGTTAAT 30108
>seq3612
Length=8526
Score = 111 bits (122), Expect = 2e-20
Identities = 187/268 (70%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| ||| |||||||||| ||||| ||||| |||||||||||
Sbjct 2655 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 2713
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| |
Sbjct 2714 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 2773
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | || ||||| |||| | | |||| ||| || || | || || ||
Sbjct 2774 CAGAGCCGTCTTGAAATCCTTCTTGGAATCCGTCATCAGGGACTCTGTTACTTACACTGA 2833
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || ||||| |||| ||||| ||||| | |||||
Sbjct 2834 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTCGTTTATGCTTTGAAGAGACAAGG 2893
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | |||||||| || |||||
Sbjct 2894 TAGAACCTTATATGGTTTCGGTGGTTAA 2921
>seq2616
Length=176567
Score = 95.1 bits (104), Expect = 2e-15
Identities = 166/242 (69%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517
|||||||||| ||||| ||||| |||||||||||| | | ||||| | | ||||| |
Sbjct 2970 GAGATAACATTCAAGGTATCACTAAGCCAGCTATCAGAAGATTGGCTAGAAGAGGTGGTG 3029
Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577
|||||||| |||| || || |||| ||||| | | | ||| |||||| ||| |
Sbjct 3030 TCAAGCGTATCTCCGGTTTAATCTACGAAGAAGTCAGAGCTGTCTTGAAGTCCTTTTTGG 3089
Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637
| |||| ||| || || | || || || ||||| || | |||||||| || |
Sbjct 3090 AATCCGTCATCAGAGACTCTGTTACTTACACTGAACACGCCAAGAGAAAGACTGTTACTT 3149
Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697
| | ||| | || || || ||||| | ||||| | | | || ||||| || |||
Sbjct 3150 CTCTAGATGTTGTTTACGCTTTGAAGAGACAAGGTAGAACCTTATACGGTTTCGGTGGTT 3209
Query 16698 AA 16699
||
Sbjct 3210 AA 3211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79067045295867
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