Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq8857 641 5e-179 seq7307 257 2e-63 seq7678 251 9e-62 seq7318 233 2e-56 >seq8857 Length=8770 Score = 641 bits (710), Expect = 5e-179 Identities = 719/956 (75%), Gaps = 4/956 (0%) Strand=Plus/Minus Query 135374 TTCTGCGAGTGGGTTACCAGCACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTG 135433 ||||| | ||| | |||||||| || |||||||| || | || |||||||| || Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371 Query 135434 ATGATTCCTACTCTTCTCG-CAGCTGCTATCTGC-TTTATTGTTGCTTTCATCGCTGCAC 135491 ||||| ||||| ||| | | | || || |||| ||||| | || ||||| ||||| | Sbjct 6370 ATGATCCCTAC-CTTATTGACCGCAACT-TCTGTATTTATCATAGCCTTCATTGCTGCTC 6313 Query 135492 CTCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATA 135551 |||| || |||||||| || || || ||||||||| |||| ||| | | |||||||| | Sbjct 6312 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACA 6253 Query 135552 ACATCATCTCTGGTGCTGTTATCCCTTCTAGCAACGCCATCGGCCTTCACTTCTATCCCA 135611 | || ||||| ||||| |||| ||| || || ||||| | ||||| ||||| | Sbjct 6252 ATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAA 6193 Query 135612 TCTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATCAACTAGTGG 135671 | |||||||| || ||| ||||||| ||| |||| ||||||||||||||| | ||| | | Sbjct 6192 TATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTG 6133 Query 135672 TCTTCCACTTCCTTATCGGTGTCTTCTCTTACATGGGTCGCGAGTGGGAACTCTCTTACC 135731 | | |||||| | | ||||| | |||||||||||| ||||||||||| || || Sbjct 6132 TTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCC 6073 Query 135732 GACTGGGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTACTG 135791 | ||||||||||||||||||||| ||| || || ||||| |||||||| |||||||||| Sbjct 6072 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTG 6013 Query 135792 CTGTTTTCCTGGTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGCA 135851 |||||||| || | ||||| |||| ||||| || |||||||||||| || |||| Sbjct 6012 CTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCA 5953 Query 135852 TTTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACAACATTCTCATGCATC 135911 ||||||| ||||| |||| ||| |||| |||||||| ||||||||||| || ||||| | Sbjct 5952 TTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACC 5893 Query 135912 CTTTCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATG 135971 | || |||||||| || || ||||| || || ||||| || || || ||||||||||| Sbjct 5892 CATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATG 5833 Query 135972 GATCTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAGGTAGAATCCCAGAACTATG 136031 | || | || || |||||| | | | || || || || ||||| || | | Sbjct 5832 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAG 5773 Query 136032 GTTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTTCG 136091 ||||||| ||||||||||| ||||| ||||| || ||||| |||||||||||||| || | Sbjct 5772 GTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTG 5713 Query 136092 GTCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTTG 136151 | || |||||||||||||||| ||||||||||||||||| |||| || ||| | | Sbjct 5712 GCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAG 5653 Query 136152 CTGCTTGGCCTGTTGTCGGTATCTGGTTTGCTGCCCTGGGCGTATCTACGATGGCGTTCA 136211 |||||||||| ||| ||||||| |||||| |||| | || | ||| ||||| |||| Sbjct 5652 CTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 5593 Query 136212 ACCTCAATGGATTCAACTTCAACCAGTCCATTGTATCTTCTGAAGGTCGTGTACTCAACA 136271 | | ||||| ||||| ||||| || || | || | | ||||||||||| | || | Sbjct 5592 ATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 5533 Query 136272 CCTGGGCAGATGTGCTGAATCGTGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327 |||| || ||| | | || || ||| || |||||||| || ||||| || ||| Sbjct 5532 CCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGT 5477 >seq7307 Length=548 Score = 257 bits (284), Expect = 2e-63 Identities = 346/478 (72%), Gaps = 4/478 (1%) Strand=Plus/Plus Query 138411 CATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTGCTCTGTGCTATTCATGGTGCT 138470 || |||||||| ||||| ||| | || ||||| || || | ||||| ||||| || || Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62 Query 138471 ACAGTAGAAAATACTTTGTATGAAGATGGCGAACAATCAAATACTTTTAAAGCATTTGAA 138530 ||||||||||| || || | |||||| || ||| ||| || || || || || | Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCAAC 122 Query 138531 CCTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCTAACCGTTACTGGTCGCAAATC 138590 || |||| |||||||||||| || ||||| || || ||||| | |||||| || || Sbjct 123 TACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGATA 182 Query 138591 TTTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCCGTC 138650 || || || || || || || || ||| | |||||||| ||||| ||||| || ||| Sbjct 183 TTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAGTC 242 Query 138651 ATGGGTCTCTGGACTA-GT-AGTATTGGTATTATTGGTCTTGCTCTTAACCTACGAGCGT 138708 | || | |||| || |||| || || | ||| | || | ||||| || || | Sbjct 243 ACAGGCTTGTGGATGGCGTCAGTA--GGAATCGTGGGTTTAGCATTGAACCTCCGGGCTT 300 Query 138709 ATGATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGATCCTGAATTCGAGACCTTCTACA 138768 | || |||||||| |||||| | || ||||||||||| || ||||| || || ||||| | Sbjct 301 ACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATA 360 Query 138769 CCAAGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGGATGGCTCCTGTGGATCAACCTC 138828 |||| |||||| | ||||| || ||| | || || |||||||||||| ||||| |||| Sbjct 361 CCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTC 420 Query 138829 ACGAAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCTGTGATATAC 138886 ||||| | ||||| || || || || || | || | || |||||||| | ||| || Sbjct 421 ACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAATAGAC 478 >seq7678 Length=557 Score = 251 bits (278), Expect = 9e-62 Identities = 258/335 (77%), Gaps = 4/335 (1%) Strand=Plus/Minus Query 135995 GTACGTGAGACGACTGAGGTAGAATCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAA 136054 |||||||| || || || ||||| || ||||| |||||||||||||| ||||||||| Sbjct 524 GTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTACAAGTTCGGACAAGAAGAA 465 Query 136055 GAGACTTACAACATTGTTGCTGCTCATGGTTACTTCGGTCGTCTGATCTTCCAATATGCG 136114 || || |||||||| || ||||| || |||||||| ||||| ||||||||||||| || Sbjct 464 GAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCGGTTGATCTTCCAATACGCT 405 Query 136115 TCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTTGCTGCTTGGCCTGTTGTCGGTATC 136174 || ||||||||| ||||| || ||||| ||| | ||||| ||||| || |||||||| Sbjct 404 TCCTTCAACAACAGCCGTTCACTGCACTTCTTCTTGGCTGCATGGCCAGTAATCGGTATC 345 Query 136175 TGGTTTGCTGCCCTGGGCGTATCT--ACGATGGCGTTCAACCTCAATGGATTCAACTTCA 136232 |||||| | || | || |||| || |||||||||||||| || ||||||||||||| Sbjct 344 TGGTTTACCGCTTTAGG--TATCAGCACAATGGCGTTCAACCTGAACGGATTCAACTTCA 287 Query 136233 ACCAGTCCATTGTATCTTCTGAAGGTCGTGTACTCAACACCTGGGCAGATGTGCTGAATC 136292 |||| || | | |||| ||||||| || || || ||||| || || | || | Sbjct 286 ACCAATCAGTAATCGATTCTCAAGGTCGCGTCATCGCTACTTGGGCTGACGTAATCAACC 227 Query 136293 GTGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327 | ||| |||||||||| || |||||||||||| Sbjct 226 GCGCTAACTTGGGTATGGAAGTCATGCACGAGCGT 192 >seq7318 Length=447 Score = 233 bits (258), Expect = 2e-56 Identities = 249/329 (76%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 138246 AACGCAATCGCATTCTCTGGTCCCATCGCTGTGTTCGTCAGCGTGTTCCTGATGTATCCT 138305 || ||||||||||| |||||||| || ||||| || || || || || || ||||| Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 138306 TTGGGTCAATCCAGTTGGTTCTTTGCTCCCTCCTTTGGTGTGGCAGCAATCTTCCGATTC 138365 ||||||| | ||||||| ||||| || |||||||| ||||| || || || ||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 138366 CTGTTGTTCCTTCAGGGTTTCCATAACTGGACCCTCAACCCCTTTCATATGATGGGCGTA 138425 | | || |||| || || ||||| |||||| | ||||| |||||||||||||| || Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 138426 GCAGGTATTCTTGGTGGTGCTCTGCTCTGTGCTATTCATGGTGCTACAGTAGAAAATACT 138485 || ||| | | || | || ||||| || |||||||||||||| || |||||||||||| Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 138486 TTGTATGAAGATGGCGAACAATCAAATACTTTTAAAGCATTTGAACCTACTCAAGAAGAA 138545 || | ||||||||| || ||||||| || || ||| | || ||||||| ||| Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 138546 GAAACCTATTCAATGGTTACTGCTAACCG 138574 ||||| ||||||||||| ||||||||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCG 329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627897989417600