Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_006882.2
Length=45176
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 578 1e-160
seq7678 201 3e-47
>seq8857
Length=8770
Score = 578 bits (640), Expect = 1e-160
Identities = 725/987 (73%), Gaps = 6/987 (1%)
Strand=Plus/Minus
Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349
|| ||| | ||| | || || || || ||||||||||| | || |||||||| || |
Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371
Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409
||||| ||| |||| | | || ||| || ||||| | ||||| || || || ||
Sbjct 6370 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATCATAGCCTTCATTGCTGCTCCT 6311
Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469
|| |||||||| ||||| || ||||| || ||||| || || || | ||||||||||||
Sbjct 6310 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAAT 6251
Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529
||||| || || || | |||| | || || || || ||||||||||||| ||
Sbjct 6250 ATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAATA 6191
Query 19530 TGGGAAGCCGGCA-CTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGT 19588
|||||||| |||| || | ||||| ||||||||||| || ||||| ||| | || ||||
Sbjct 6190 TGGGAAGC-GGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 6132
Query 19589 CTTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAG 19648
| ||||||||| |||| ||||| ||| ||| | |||||||||| || | |
Sbjct 6131 TCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCG 6072
Query 19649 ATTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGC 19708
| || ||| | || ||||| || || ||| |||| || | |||| ||| |||
Sbjct 6071 TCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGC 6012
Query 19709 TGTGTTTCTCG-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTA 19767
||| ||||| | |||||||| |||| ||||| || ||| ||||||||||||||| || |
Sbjct 6011 TGT-TTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCA 5953
Query 19768 TCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATC 19827
| ||||||||||| ||||||||| | |||||||| || |||||||| ||||||||||| |
Sbjct 5952 TTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACC 5893
Query 19828 CGTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACG 19887
| || |||||| | ||||| ||||| ||||| ||||| || || || ||||||||| |
Sbjct 5892 CATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATG 5833
Query 19888 GAAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATG 19947
| ||||| ||||| | |||| |||||| || || ||| ||| || | |
Sbjct 5832 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAG 5773
Query 19948 GCTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTG 20007
| || || ||||| ||||| ||||| || ||||||||||| ||||| || || || ||||
Sbjct 5772 GTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTG 5713
Query 20008 GGAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTG 20067
| ||||||| || |||||||| |||||| || |||||||||||||||||||| | |
Sbjct 5712 GCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAG 5653
Query 20068 CTACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCA 20127
|| ||| ||||| | || || ||| |||| | | || || | |||||||||||||
Sbjct 5652 CTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 5593
Query 20128 ACCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCA 20186
| | |||||||| || || || || || ||||||||| ||||| || ||||
Sbjct 5592 ATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAA-GGTCGTGTAATTAAT 5534
Query 20187 ACATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAAT 20246
|| || |||||| | | || | |||||||| || | ||||||||||| || || |||
Sbjct 5533 ACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 5474
Query 20247 GCTCATAACTTCCCACTTGATTTAGCT 20273
|||||||||||||| || || |||||
Sbjct 5473 GCTCATAACTTCCCTCTAGACCTAGCT 5447
>seq7678
Length=557
Score = 201 bits (222), Expect = 3e-47
Identities = 280/390 (72%), Gaps = 2/390 (1%)
Strand=Plus/Minus
Query 19893 TTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTAT 19952
|||||||||||||| | | ||||| || || | ||| || ||||| || ||
Sbjct 542 TTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTAC 483
Query 19953 AAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGA 20012
|||||||| ||||| ||||| || || || || || ||||||||||| |||||||| |
Sbjct 482 AAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCGG 423
Query 20013 TTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACT 20072
||||| || ||||| ||||| ||||| || ||||| | || ||||| | ||| |
Sbjct 422 TTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTTCTTGGCTGCA 363
Query 20073 TTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTT 20132
| || || | || || ||| ||||| | | || ||| |||| ||||| ||||||||
Sbjct 362 TGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGCGTTCAACCTG 303
Query 20133 AATGGTTTTAACTTTAACCAGTCAGTAGTTGA-TGTCAACGGAAAGATAATCCCAACATG 20191
|| || || ||||| ||||| |||||| | || | |||| || | ||| | || ||
Sbjct 302 AACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAA-GGTCGCGTCATCGCTACTTG 244
Query 20192 GGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCA 20251
|||||| ||| | || | |||||| | || | ||||| ||||||||||| || |||||
Sbjct 243 GGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCGTAACGCTCA 184
Query 20252 TAACTTCCCACTTGATTTAGCTTCGGCTGA 20281
|||||||| | || || ||| | | |||
Sbjct 183 CAACTTCCCCTTAGACTTGGCTGCTGGTGA 154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144426301738764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |