Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 533 2e-146
seq7678 291 1e-73
>seq8857
Length=8770
Score = 533 bits (590), Expect = 2e-146
Identities = 686/944 (73%), Gaps = 2/944 (0%)
Strand=Plus/Minus
Query 211610 TTGGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAG-CTGCAACAACATGCTTTATC 211668
|||| |||||||||||| | |||||||| | ||| | | | ||||| | ||||||
Sbjct 6390 TTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATC 6332
Query 211669 GTAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGT 211728
|||| ||||| || || ||||| || ||||| || || || |||||||| || ||||
Sbjct 6331 ATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGA 6272
Query 211729 TCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATC 211788
|| || | || || ||||| || ||||| ||||| || |||| |||| || |||
Sbjct 6271 TCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATC 6212
Query 211789 GGTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGT 211848
||||| ||||| ||||| || |||||||| ||| || ||||||| ||| | |||||||||
Sbjct 6211 GGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGT 6152
Query 211849 GGTCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGA 211908
|||||||| || | | | | |||||| | | || | | |||||||| |
Sbjct 6151 GGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGT 6092
Query 211909 CAGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCA 211968
|||||||||| | |||| | |||||||| |||||||| |||||| ||||||||
Sbjct 6091 GAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCT 6032
Query 211969 CCTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCA 212028
||||| |||| ||| ||||| ||| | |||||||| | ||||| || || ||
Sbjct 6031 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCT 5972
Query 212029 GACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAA 212088
|| ||||||||| |||| || || || || |||||||| ||| | |||||||| || |||
Sbjct 5971 GATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAA 5912
Query 212089 CATAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCA 212148
|| |||||||||||||||||||| || ||| |||||| || ||| | || ||||| |
Sbjct 5911 CACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCC 5852
Query 212149 TTATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGT 212208
|||| ||||||||| ||||| | || || ||| | ||| | ||||| || |
Sbjct 5851 CTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAA 5792
Query 212209 TTAGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTT 212268
|| || || | |||||||| ||||| ||||| ||||| || ||||| || ||
Sbjct 5791 AATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTA 5732
Query 212269 GCTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGA 212328
||||| ||||| || || || || | |||||||| |||||| ||||||||| |
Sbjct 5731 GCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGT 5672
Query 212329 AGTTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGT 212388
|||||| |||||| | || | ||||| |||||| || | ||||| || || | |||
Sbjct 5671 TCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGT 5612
Query 212389 ATCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCA 212448
|| | || ||||| ||||| ||||||| ||||| ||||| ||||| || ||||||
Sbjct 5611 ATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGT 5552
Query 212449 TCAGGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAA 212508
|||| || || ||| || | |||| | ||||| | || |||||||||||||||
Sbjct 5551 CAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAA 5492
Query 212509 GTTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552
|||||||| ||| | ||||| || |||||||| || ||| ||||
Sbjct 5491 GTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 5448
>seq7678
Length=557
Score = 291 bits (322), Expect = 1e-73
Identities = 318/424 (75%), Gaps = 9/424 (2%)
Strand=Plus/Minus
Query 212163 GCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTTTAGATTCACAGAA 212222
||||||||| | ||||| || || | | ||||||||||| | || ||||| ||
Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493
Query 212223 CTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATA 212282
||| |||||||||||||||||||||||||| || || |||||||| |||||||| || ||
Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433
Query 212283 CTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAAGTTTACACTTCTT 212342
||| ||| | | |||||||| || || || |||||||||||| | | ||||||||
Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373
Query 212343 CCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGC 212402
| | || ||||||| || ||| || | ||||| ||| || | |||||| ||||||||||
Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313
Query 212403 ATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAGGTTGT 212462
|||||||| || ||||||||||||||||||||||| | ||| | |||| || |
Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253
Query 212463 TCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAG 212522
||||||||| ||| || | ||| | || ||| | ||||||||||| |||||||| |
Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193
Query 212523 AAATGCACACAACTTCCCACTTGACTTAGCATCTGCTAACGAGACAGAAGTTGCTCTTGT 212582
|| || ||||||||||| | ||||| || ||| | |||||||||| |||
Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGT---------GAAGTTGCTCCTGT 142
Query 212583 TGCT 212586
|||
Sbjct 141 GGCT 138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807465167689640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |