Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq8857 533 2e-146 seq7678 291 1e-73 >seq8857 Length=8770 Score = 533 bits (590), Expect = 2e-146 Identities = 686/944 (73%), Gaps = 2/944 (0%) Strand=Plus/Minus Query 211610 TTGGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAG-CTGCAACAACATGCTTTATC 211668 |||| |||||||||||| | |||||||| | ||| | | | ||||| | |||||| Sbjct 6390 TTGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATC 6332 Query 211669 GTAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGT 211728 |||| ||||| || || ||||| || ||||| || || || |||||||| || |||| Sbjct 6331 ATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGA 6272 Query 211729 TCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATC 211788 || || | || || ||||| || ||||| ||||| || |||| |||| || ||| Sbjct 6271 TCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATC 6212 Query 211789 GGTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGT 211848 ||||| ||||| ||||| || |||||||| ||| || ||||||| ||| | ||||||||| Sbjct 6211 GGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGT 6152 Query 211849 GGTCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGA 211908 |||||||| || | | | | |||||| | | || | | |||||||| | Sbjct 6151 GGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGT 6092 Query 211909 CAGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCA 211968 |||||||||| | |||| | |||||||| |||||||| |||||| |||||||| Sbjct 6091 GAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCT 6032 Query 211969 CCTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCA 212028 ||||| |||| ||| ||||| ||| | |||||||| | ||||| || || || Sbjct 6031 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCT 5972 Query 212029 GACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAA 212088 || ||||||||| |||| || || || || |||||||| ||| | |||||||| || ||| Sbjct 5971 GATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAA 5912 Query 212089 CATAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCA 212148 || |||||||||||||||||||| || ||| |||||| || ||| | || ||||| | Sbjct 5911 CACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCC 5852 Query 212149 TTATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGT 212208 |||| ||||||||| ||||| | || || ||| | ||| | ||||| || | Sbjct 5851 CTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAA 5792 Query 212209 TTAGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTT 212268 || || || | |||||||| ||||| ||||| ||||| || ||||| || || Sbjct 5791 AATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTA 5732 Query 212269 GCTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGA 212328 ||||| ||||| || || || || | |||||||| |||||| ||||||||| | Sbjct 5731 GCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGT 5672 Query 212329 AGTTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGT 212388 |||||| |||||| | || | ||||| |||||| || | ||||| || || | ||| Sbjct 5671 TCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGT 5612 Query 212389 ATCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCA 212448 || | || ||||| ||||| ||||||| ||||| ||||| ||||| || |||||| Sbjct 5611 ATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGT 5552 Query 212449 TCAGGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAA 212508 |||| || || ||| || | |||| | ||||| | || ||||||||||||||| Sbjct 5551 CAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAA 5492 Query 212509 GTTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552 |||||||| ||| | ||||| || |||||||| || ||| |||| Sbjct 5491 GTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 5448 >seq7678 Length=557 Score = 291 bits (322), Expect = 1e-73 Identities = 318/424 (75%), Gaps = 9/424 (2%) Strand=Plus/Minus Query 212163 GCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTTTAGATTCACAGAA 212222 ||||||||| | ||||| || || | | ||||||||||| | || ||||| || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 212223 CTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATA 212282 ||| |||||||||||||||||||||||||| || || |||||||| |||||||| || || Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 212283 CTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAAGTTTACACTTCTT 212342 ||| ||| | | |||||||| || || || |||||||||||| | | |||||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373 Query 212343 CCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGC 212402 | | || ||||||| || ||| || | ||||| ||| || | |||||| |||||||||| Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313 Query 212403 ATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAGGTTGT 212462 |||||||| || ||||||||||||||||||||||| | ||| | |||| || | Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253 Query 212463 TCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAG 212522 ||||||||| ||| || | ||| | || ||| | ||||||||||| |||||||| | Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193 Query 212523 AAATGCACACAACTTCCCACTTGACTTAGCATCTGCTAACGAGACAGAAGTTGCTCTTGT 212582 || || ||||||||||| | ||||| || ||| | |||||||||| ||| Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGT---------GAAGTTGCTCCTGT 142 Query 212583 TGCT 212586 ||| Sbjct 141 GGCT 138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807465167689640