Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_006884.2
Length=178249
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 520 1e-142
seq7678 259 5e-64
seq7307 255 7e-63
seq7318 114 1e-20
>seq8857
Length=8770
Score = 520 bits (576), Expect = 1e-142
Identities = 711/988 (72%), Gaps = 10/988 (1%)
Strand=Plus/Minus
Query 170666 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 170725
|| ||| | ||| |||| |||||| || ||| | ||| |||| ||||||||||| ||
Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371
Query 170726 ATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCC 170784
|||||||| | ||| | || || || || || || |||| ||||| ||||||||
Sbjct 6370 ATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATCATAGCCTTCATTGCTGCTCC 6312
Query 170785 TCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAA 170844
|||||| ||||| || || || | ||||| ||| | || ||||| | || || |||||
Sbjct 6311 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAA 6252
Query 170845 CATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCAT 170904
|| ||||| ||||| | |||| |||| || || || || ||||| ||||| ||
Sbjct 6251 TATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAAT 6192
Query 170905 CTGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTACCAGTTAGTTAT 170964
|||||||| || || | || || ||||| ||||| || |||||||| || || || |
Sbjct 6191 ATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 6132
Query 170965 TTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAG 171024
| | |||||| | | || | || ||||||||| | |||||||||| | | |
Sbjct 6131 TCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCG 6072
Query 171025 ACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAGCATTTGC 171084
|| || ||| | |||||||| ||| || || ||||| ||||| | || || |||
Sbjct 6071 TCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGC 6012
Query 171085 AGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTAT 171144
|| ||| | | || ||| | ||||| || || |||||||||||||| ||||| ||
Sbjct 6011 TGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCAT 5952
Query 171145 CTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAATGCACCC 171204
|| ||||| |||||||| ||| | || ||||| || ||||||||||| || ||||||||
Sbjct 5951 TTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCC 5892
Query 171205 CTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAATGCACGG 171264
|| || ||| ||||||||| ||| | || ||||| || || ||||| ||||| ||
Sbjct 5891 ATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGG 5832
Query 171265 TTCTCTAGTGACATCTTCTCTAATCAGAGAGACAACTGAGAACGAGAGTCAAAACTACGG 171324
||| | || || ||| | | ||||| || || || || || || | || | ||
Sbjct 5831 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGG 5772
Query 171325 CTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGG 171384
|| || ||||| ||||| |||||||| ||||| ||||| ||||||||||| || || ||
Sbjct 5771 TTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGG 5712
Query 171385 TAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGC 171444
|||| |||||||| |||||| ||||||||||||||||| ||||| |||||| | ||
Sbjct 5711 CCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGC 5652
Query 171445 TGTATTCCCTGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAA 171504
|| | || || || || | ||||| || || | ||||| |||| ||||| |||||
Sbjct 5651 TGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 5592
Query 171505 CCTTAACGGATTCAACTTCAACCAATCAGTTGTAGAT--GCAA--ACGGAAAGATTGTAC 171560
| || || ||||| ||||| ||||| || || ||| ||| || | | |||
Sbjct 5591 TTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 5532
Query 171561 CAACATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAA 171620
| || | ||| | ||||| | || |||||||| |||||||||||||||||| | |
Sbjct 5531 C----TGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTA 5476
Query 171621 ATGCACACAACTTCCCACTAGACCTAGC 171648
|||| || |||||||| |||||||||||
Sbjct 5475 ATGCTCATAACTTCCCTCTAGACCTAGC 5448
>seq7678
Length=557
Score = 259 bits (286), Expect = 5e-64
Identities = 284/378 (75%), Gaps = 0/378 (0%)
Strand=Plus/Minus
Query 171314 CAAAACTACGGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCAT 171373
||||||||||| || ||||||||||||||||||||||| || ||||| || ||||| ||
Sbjct 497 CAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACAC 438
Query 171374 GGATACTTCGGTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACAC 171433
|| ||||| ||| | || |||||||| || || || ||||||||| |||||| | |||
Sbjct 437 GGTTACTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCAC 378
Query 171434 TTCTTCCTCGCTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACA 171493
|||||| | |||| || || ||| || || | ||||| ||| || | |||||| | |||
Sbjct 377 TTCTTCTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACA 318
Query 171494 ATGGCATTCAACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAG 171553
||||| |||||||| |||||||||||||||||||||||||| | ||| | | ||
Sbjct 317 ATGGCGTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGC 258
Query 171554 ATTGTACCAACATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCAT 171613
| | | || |||| || || | ||| | || ||| | || |||||||| |||||
Sbjct 257 GTCATCGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCAC 198
Query 171614 GAAAGAAATGCACACAACTTCCCACTAGACCTAGCATCTGCTGAGTCTACAACAGTTGCA 171673
|| | || || ||||||||||| ||||| | || ||| ||| | | | || ||
Sbjct 197 GAGCGTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCT 138
Query 171674 TTAACTGCACCTTCAATC 171691
|||||||||||| |||||
Sbjct 137 TTAACTGCACCTGCAATC 120
>seq7307
Length=548
Score = 255 bits (282), Expect = 7e-63
Identities = 352/494 (71%), Gaps = 25/494 (5%)
Strand=Plus/Plus
Query 172341 CATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACATGGTGCA 172400
|| |||||||| ||||| ||| |||| |||||||| || | |||||||| || || ||
Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62
Query 172401 ACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATTCAATCT 172460
|||||| | ||||| || | ||||||| ||||| |||
Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGG------------TGAAGC---------ATCC 101
Query 172461 ACAACTTTCAGAGCATTCGATCCTACAC--AGGAAGAAGAAACTTATAGTATGATTACTG 172518
| ||| ||| | || ||| | |||||| | | ||||||||| || ||| | || |
Sbjct 102 AAAACCTTCCGCGCCTTCAA--CTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAG 159
Query 172519 CTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTACACT 172578
| ||| ||||||||||||||||||| ||||| || || || |||||| | | |||||||
Sbjct 160 CGAACCGATTCTGGTCACAGATATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACT 219
Query 172579 TCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTAGGTC 172638
|| | ||| |||| ||||| |||| || |||||| | || |||| ||||| |||
Sbjct 220 TCTTCATGCTGTTTGTACCAGTCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTT 279
Query 172639 TTGCACTTAACCTCAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACC 172698
| ||| | |||||| | || |||||||| ||||| ||||| | | |||||||||||||
Sbjct 280 TAGCATTGAACCTCCGGGCTTACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACC 339
Query 172699 CAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTATGAGAGCATGGA 172758
|||| |||||||| ||||| || || |||||| | || || || ||||| | || ||||
Sbjct 340 CAGAATTTGAAACATTCTATACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGA 399
Query 172759 TGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCACGAG 172818
|| | || ||||| || || || | ||||| |||||||| || || | || || |
Sbjct 400 TGGCTCCTCAAGATCAGCCTCACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTG 459
Query 172819 GCAACGCACTATAA 172832
| ||||| || |||
Sbjct 460 GTAACGCTCTCTAA 473
>seq7318
Length=447
Score = 114 bits (126), Expect = 1e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 172221 TTTCTAATATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGTGTCGCA 172280
|||||||| |||||| | |||||| | ||||||| || || ||| |||||||| |||
Sbjct 46 TTTCTAATTTATCCACTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCA 105
Query 172281 GCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAATCCATTT 172340
|| || ||||| | || |||| | || || || || ||| || | || ||||||
Sbjct 106 GCTATATTTCGCTTCATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTT 165
Query 172341 CATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACATGGTGCA 172400
||||||||||| || || ||| || | || | || | ||||| || || ||||||||
Sbjct 166 CATATGATGGGAGTTGCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCG 225
Query 172401 ACAGTACAGAACACATTGTATGAAGA 172426
|| ||| | || || || | ||||||
Sbjct 226 ACGGTAGAAAATACTTTATTTGAAGA 251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570205222157160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |