Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq4845 125 7e-24 seq1626 118 1e-21 seq2811 113 4e-20 seq3668 105 6e-18 seq8630 89.7 5e-13 seq3706 89.7 5e-13 >seq4845 Length=48244 Score = 125 bits (138), Expect = 7e-24 Identities = 168/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || ||| | ||||| || | || ||| | || | || || Sbjct 16287 ATGCAAATCTTCGTCAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 16228 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| |||||| ||||| ||||| || ||||| || ||| Sbjct 16227 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 16168 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTATA 26946 |||||||| |||| | || || ||||| || |||| ||||| ||||| |||||| Sbjct 16167 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAG--ACTATA 16110 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 |||| ||||| || |||||| | || ||||| ||||||| ||||| || || Sbjct 16109 ACATCCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGACTGAGAGGTGGCAA 16058 Score = 125 bits (138), Expect = 7e-24 Identities = 176/245 (72%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 26753 TTTTTAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCAT 26812 |||| | | | ||| |||||| | || || || ||| | ||||| || | || ||| | Sbjct 16759 TTTTAAATAAGACACTATGCAAATCTTCGTCAAGACACTGACTGGTAAGACCATAACCTT 16700 Query 26813 CGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGG 26872 || | || || ||||||||||| | ||||| |||||| ||||| ||||| Sbjct 16699 AGAGGTCGAGTCTTCTGACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGG 16640 Query 26873 GATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA 26932 || ||||| || ||||||||||| |||| | || || ||||| || |||| ||||| Sbjct 16639 TATTCCTCCAGACCAACAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAAC 16580 Query 26933 C--GTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGA 26990 ||||| |||||||||| ||||| || |||||| | || ||||| ||||||| ||| Sbjct 16579 TTTGTCAG--ACTATAACATCCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGACTGAGA 16522 Query 26991 GGAGG 26995 || || Sbjct 16521 GGTGG 16517 Score = 123 bits (136), Expect = 2e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || ||| | ||||| || | || ||| | || | || || Sbjct 16515 ATGCAAATCTTCGTCAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 16456 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| |||||| ||||| ||||| || ||||| || ||| Sbjct 16455 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 16396 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGACTATA 26946 |||||||| |||| | || || ||||| || |||| ||||| ||||| |||||| Sbjct 16395 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAG--ACTATA 16338 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||| ||||| || |||||| | || ||||| ||||||| ||||| || Sbjct 16337 ACATCCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGACTGAGAGGTGG 16289 >seq1626 Length=97905 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837 || || || || || ||||| ||| | ||||| | ||| | ||||| |||||||| Sbjct 62781 TTCGTTAAGACTTTGACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 62722 Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897 || | |||||| |||||| ||||||||||| || || || || ||||||||| | Sbjct 62721 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 62662 Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957 || | | || || ||| | ||||| | ||||| | | |||||| ||||||||||| Sbjct 62661 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 62602 Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||| | ||| | ||| ||||| | ||||| || Sbjct 62601 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 62564 >seq2811 Length=58406 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| |||| || || | || ||| | || | ||||| | Sbjct 27423 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 27364 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| || ||| ||||| ||||| || ||||| |||||| Sbjct 27363 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 27304 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | |||| | ||| || ||||| ||||| | ||||| | || || ||| Sbjct 27303 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTACAAC 27244 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || ||||||||| | || |||| ||||| | ||||| || Sbjct 27243 ATTCAGAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 27197 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||| |||| || || | || ||| | || | ||||| | Sbjct 27195 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 27136 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | ||||| || ||| ||||| ||||| || ||||| |||||| Sbjct 27135 GACACTATTGACAACGTCAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 27076 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | |||| | ||| || ||||| ||||| | ||||| | || |||||| Sbjct 27075 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 27016 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 ||||| || || |||||| | || || || ||||| | || || || || Sbjct 27015 ATTCAGAAGGAGTCTACTCTTCACCTTGTGTTGAGATTGAGGGGTGGTAA 26966 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || || || ||| | || || | || | ||||| | Sbjct 27651 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTAGAGGTTGAATCTTCC 27592 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || || ||| ||||| ||||| || ||||| |||||| Sbjct 27591 GACACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 27532 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | || | | ||| || || || ||||| | ||||| | | ||||| ||| Sbjct 27531 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 27472 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||| ||||||||| | || |||| ||||| | ||||| || Sbjct 27471 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 27425 >seq3668 Length=38538 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837 ||||| || || || ||||| || | ||||| | ||| | ||||| ||||| || Sbjct 8105 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 8046 Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897 || | ||||| ||||||| ||||| ||||| || || || || ||||||||| | Sbjct 8045 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 7986 Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957 || | | || || ||| | ||||| | ||||| | | ||||| |||||||||||| Sbjct 7985 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 7926 Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||| | || | ||| ||||| | ||||| || Sbjct 7925 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 7888 >seq8630 Length=306 Score = 89.7 bits (98), Expect = 5e-13 Identities = 141/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || || || || | ||||| || | |||||| |||| | || || Sbjct 104 CAATATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTC 163 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 |||||||||||| | || || |||||| ||||| || ||||| || || || Sbjct 164 TTCCGACACCATCGACAATGTTAAGAGCAAGATTCAGGACAAGGAGGGGATCCCACCTGA 223 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||||||| | ||||||| || ||| || |||||||| |||| | | | || || || Sbjct 224 TCAACAACGTCTCATTTTCGCCGGAAAGCAACTCGAGGATGGTCGCACTCTCTCTGATTA 283 Query 26945 TAACATTCAAAAAGAATCTACT 26966 ||||| || || || || ||| Sbjct 284 CAACATCCAGAAGGAGTCCACT 305 >seq3706 Length=333 Score = 89.7 bits (98), Expect = 5e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 26814 GAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGG 26873 ||| | ||||| ||| |||||||| | || || || ||| ||||| ||||| Sbjct 325 GAAGTTGAATCTTCCGATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGT 266 Query 26874 ATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC 26933 || ||||| |||||||||||| | || | | ||| || || | ||||| | ||||| | Sbjct 265 ATCCCTCCAGATCAACAAAGATTGATCTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACC 206 Query 26934 GTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGA 26993 | ||||| ||||| ||||| ||||||||| | || |||| ||||| | ||||| Sbjct 205 TTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGT 146 Query 26994 GG 26995 || Sbjct 145 GG 144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478609035125680