Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq4483 138 1e-27 seq3354 131 2e-25 seq8071 123 2e-23 seq7783 120 3e-22 seq6248 113 4e-20 seq5887 113 4e-20 seq2811 109 5e-19 seq4029 86.0 6e-12 seq1626 84.2 2e-11 >seq4483 Length=688 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||| |||||||| || |||||||| ||| Sbjct 415 CCACCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 474 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||||||| |||| || ||||||||||| || ||| Sbjct 475 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCGGGGGGG 534 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 535 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCGATGGTGTCGGACGACTCCACC 594 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | || ||||| || || || || ||||| |||||||||| Sbjct 595 TCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATGA 643 >seq3354 Length=695 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | ||||||||||| || |||||||| || Sbjct 240 CCACCACGCAGACGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 299 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 300 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 359 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | | | || || | |||||| | Sbjct 360 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTTGATGGTGTCCGAGGACTCCACC 419 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||||| ||| ||||| || ||||| || |||||||||||||| Sbjct 420 TCGAGGGTAATGGTCTTACCCGTCAGAGTCTTGACGAAAATCTGCAT 466 >seq8071 Length=459 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | ||| |||||||| || |||||||| || Sbjct 208 CCACCACGAAGACGGAGAACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAA 267 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| || |||| | |||||||||||| ||||| Sbjct 268 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGA 327 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 328 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAACC 387 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || ||||| | || || |||||||| |||||| Sbjct 388 TCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAAATTTGCATG 435 >seq7783 Length=540 Score = 120 bits (132), Expect = 3e-22 Identities = 161/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||||| || || || | ||||||||||| || |||||||| ||| Sbjct 224 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 165 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| |||||||| ||||| |||| | |||||||| || || ||| Sbjct 164 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGG 105 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || || | |||||||| Sbjct 104 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACC 45 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTG 131231 |||| ||| | ||| || ||||| ||||| || || || ||||| Sbjct 44 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTG 1 >seq6248 Length=918 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | ||| |||||||| ||||||||||| ||| | Sbjct 585 CCACCACGGAGACGGAGCACAAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAC 526 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| || ||||| || || |||| | |||||| ||||| ||||| Sbjct 525 AGAGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGTTGGTCTGGAGGA 466 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | ||| |||| ||| || | Sbjct 465 ATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATAGTGTCGGAGGATTCAACC 406 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || || || || ||||| |||||||| Sbjct 405 TCGAGTGTGATGGTCTTGCCAGTAAGTGTCTTGACGAAGATCTGCAT 359 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| ||||||||| || || | ||||||||||| || |||||||| || Sbjct 814 GCCGCCACGCAGACGCAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCAGA 755 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || ||| ||||| |||||||| ||||| |||| | |||||| ||||| || || Sbjct 754 GAGAGTACGCCCATCCTCCAGCTGCTTTCCTGCAAAGATAAGACGCTGTTGGTCTGGTGG 695 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || || ||| | | || | ||| || | || || | Sbjct 694 GATACCCTCCTTGTCCTGAATCTTGGTCTTCACGTTGTCGATAGTGTCTGAAGATTCCAC 635 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| || || || || | || || ||||| || ||||| Sbjct 634 CTCGAGTGTAATCGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 587 >seq5887 Length=461 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || | || | ||||| ||||| |||| ||| |||||||| || Sbjct 263 CCACCACGGAGACAGAAGACGAGATGTAGAGTCGATTCCTATTGGATGTTGTAGTCCAAA 204 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| || |||||||| ||| |||| || || | ||||| || ||| Sbjct 203 AGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCGAAGATCAAGCGTTATTGGTCGGGTGGG 144 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || ||||| | || | ||||| | ||||| | Sbjct 143 ATTCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCCACC 84 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || || || || || || |||||||||||||| Sbjct 83 TCGAAGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAAATCTGCAT 37 >seq2811 Length=58406 Score = 109 bits (120), Expect = 5e-19 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || ||| || || | || || |||||||| |||||||| || | Sbjct 27425 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 27484 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | ||| ||||||||||| || || |||| || | || || || |||||| Sbjct 27485 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 27544 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| |||||| ||| | | || | || |||| || || | Sbjct 27545 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTGTCGGAAGATTCAACC 27604 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACTTATT 131242 || | || | |||||||||||| | ||| || |||||||||||||| | |||| Sbjct 27605 TCTAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATT 27659 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || ||| | || | || |||||||| |||||||| ||||| | Sbjct 26969 CCACCCCTCAATCTCAACACAAGGTGAAGAGTAGACTCCTTCTGAATGTTATAATCAGAC 27028 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||| || || ||||| || || | || || | || || || ||||| Sbjct 27029 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 27088 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| |||||| ||||| | || | ||| |||| || || | Sbjct 27089 ATACCTTCCTTGTCTTGAATTTTCGACTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 27148 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || ||||||||||| |||||||| ||||| Sbjct 27149 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27195 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || ||| || || | || || ||||| |||||||||||||| | Sbjct 27197 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 27256 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||| || || ||||| || || | || || | || || || ||||| Sbjct 27257 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 27316 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||||| |||| | || | ||| |||| || || | Sbjct 27317 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 27376 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || ||||||||||| |||||||| ||||| Sbjct 27377 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27423 >seq4029 Length=108955 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || || || |||| || ||||||||||| |||||||| || | Sbjct 14295 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 14236 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||| || | ||||| || || |||| || | || ||||| || || Sbjct 14235 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 14176 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||||| | || | ||| || | || || | Sbjct 14175 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACT 14116 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| || |||||||||| ||| || |||||||| ||||| Sbjct 14115 TCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 14069 >seq1626 Length=97905 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | || |||||||||| || || ||||||||||||||||| ||| | Sbjct 62564 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAC 62623 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | ||| || | ||||| || || |||| || | || ||||| || ||| Sbjct 62624 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 62683 Query 131128 ATTCCTTCTTTGTC 131141 || ||||||||||| Sbjct 62684 ATACCTTCTTTGTC 62697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471960176472960