Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq6248 95.1 1e-14
seq8071 93.3 3e-14
seq7783 82.4 6e-11
seq4845 82.4 6e-11
seq4483 82.4 6e-11
>seq6248
Length=918
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || |||||||| || ||||||||||||| || || | | ||||| | |||
Sbjct 561 TGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCCTCAAGTTGC 502
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAAT-TTG 16851
|| || ||| | || || ||||||||||| ||| | |||||| ||||| ||| |||
Sbjct 501 TTTCCAGCAAAGATCAGACGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTG 442
Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911
| ||| || | | | | ||||||| || || || | |||||||| || || ||
Sbjct 441 GT-CTTGACGTTGTCGATAGTGTCGGAGGATTCAACCTCGAGTGTGATGGTCTTGCCAGT 383
Query 16912 CAGCGTTTTGACAAAAATCTGCAT 16935
|| || ||||| || ||||||||
Sbjct 382 AAGTGTCTTGACGAAGATCTGCAT 359
Score = 82.4 bits (90), Expect = 6e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || ||||||||||||| | ||| | ||||| | |||
Sbjct 333 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGACCATCCTCGAGTTGC 274
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-CGGCAATTTG 16851
||||| || | || | ||||||||||| ||| | |||||| |||| | | | |||
Sbjct 273 TTGCCGGCGAAGATCAAGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTG 214
Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911
| ||| || | | | | ||||| | ||| || | |||||||| || |||||
Sbjct 213 GT-CTTGACATTGTCGATGGTGTCAGAAGACTCGACCTCGAGAGTGATGGTCTTGCCGGT 155
Query 16912 CAGCGTTTTGACAAAAATCTGCAT 16935
|| || ||||| || ||||||||
Sbjct 154 GAGGGTCTTGACGAAGATCTGCAT 131
>seq8071
Length=459
Score = 93.3 bits (102), Expect = 3e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || || |||||||| || ||||||||||| | | ||| | | |||
Sbjct 223 AGAACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCC 282
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | || ||||| ||| | ||||| ||||| ||||| ||| | |||||| |||||
Sbjct 283 TCAAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 342
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
|| | ||| || | | | | |||||| | ||| || | |||||||||
Sbjct 343 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTC 402
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTAG 16942
|| ||||||| || ||||| ||||| ||||| ||| ||
Sbjct 403 TTGCCGGTCAAGGTCTTGACGAAAATTTGCATGTTGAAG 441
>seq7783
Length=540
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/226 (69%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || || | || |||| || ||||| |||||||| || |||||||||||||
Sbjct 224 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 165
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | ||||||| | || || || ||| | ||||| ||||| || || ||
Sbjct 164 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGG 105
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||| || ||||| || || || ||| || | | | | ||||| || |||
Sbjct 104 ATGCCTTCCTTGTCTTGGATCTTGGC--CTTGACGTTGTCGATGGTGTCAGAGGACTCGA 47
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTG 16932
|| | ||||||||| || ||||| || || || ||||| |||||
Sbjct 46 CCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTG 1
>seq4845
Length=48244
Score = 82.4 bits (90), Expect = 6e-11
Identities = 163/241 (68%), Gaps = 3/241 (1%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| |||| || |||| |||| || || || ||||||||||| ||||| ||||| | |
Sbjct 16517 CCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGAC 16576
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | ||||||| ||| || || ||| |||| || | |||||||| |||
Sbjct 16577 AAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGA 16636
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| || || ||||| ||| | ||| || | | | | ||||| | |||
Sbjct 16637 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACC 16696
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTAGCCTTAT 16948
|| | ||| ||||| || || ||||| || ||||| || || ||||| ||| |||||
Sbjct 16697 TCTAAGGTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCATAGTGT---CTTAT 16753
Query 16949 T 16949
|
Sbjct 16754 T 16754
>seq4483
Length=688
Score = 82.4 bits (90), Expect = 6e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || ||||||||||||| | ||| | ||||||| | ||
Sbjct 439 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGC 498
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-CGGCAATTTG 16851
||||| || | || | ||||| ||||| || | |||||| |||| | | | |||
Sbjct 499 TTGCCTGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTG 558
Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911
| ||| || | | | | |||||| | |||| || | |||||| || || || ||
Sbjct 559 GT-CTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTACCCGT 617
Query 16912 CAGCGTTTTGACAAAAATCTGCAT 16935
|| || ||||| || ||||||||
Sbjct 618 GAGGGTCTTGACGAAGATCTGCAT 641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405043966807810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |