Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_008296.2
Length=177300
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 545 3e-150
seq7678 401 7e-107
seq7307 246 3e-60
seq7318 239 5e-58
>seq8857
Length=8770
Score = 545 bits (604), Expect = 3e-150
Identities = 717/988 (73%), Gaps = 4/988 (0%)
Strand=Plus/Minus
Query 166053 CTTCTGCGAATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACT 166112
|||||| | ||| | ||| || | ||||| ||||| |||| |||||||| |
Sbjct 6431 CTTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTT 6372
Query 166113 GATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCAC 166171
|||||| || || | ||| | ||||| ||||| || ||| | || ||| | || || |
Sbjct 6371 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATCATAGCCTTCATTGCTGCTC 6313
Query 166172 CTCCTGTCGATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACA 166231
|||| || ||||| ||||| || ||||| || || | || ||| | | || || ||||
Sbjct 6312 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACA 6253
Query 166232 ACATCATCTCTGGTGCTGTTGTCCCCTCCTCCAACGCAATTGGTCTTCACTTCTATCCCA 166291
| || ||||| ||||| || | || | || || || ||| | ||||| ||||| |
Sbjct 6252 ATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAA 6193
Query 166292 TCTGGGAAGCAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGTAG 166351
| |||||||| ||||| ||||||||||| | || || |||||||||| |||| | |
Sbjct 6192 TATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTG 6133
Query 166352 TCTTCCACTTCCTCATCGGCATCTATGCCTACATGGGTCGTGAATGGGAATTGTCTTACC 166411
| | |||||| | | || | | |||||||||||||| |||||| || || ||
Sbjct 6132 TTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCC 6073
Query 166412 GCCTCGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATCCG 166471
| || |||||||| ||||||||| || || || || || ||||||||||| || | |
Sbjct 6072 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTG 6013
Query 166472 CAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGGTA 166531
| || ||| || | || || | |||||||| || ||||| | ||||| || || |
Sbjct 6012 CTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCA 5953
Query 166532 TCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTCATGCACC 166591
| ||| || ||||||| ||| |||| ||||| || || ||||||||||| |||||||
Sbjct 5952 TTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACC 5893
Query 166592 CCTTCCATATGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCACG 166651
| || || ||| | |||||||| |||||||| ||||| || || || || ||||| |
Sbjct 5892 CATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATG 5833
Query 166652 GCAGTCTCGTTACTTCCTCGCTCG-TCCGTGAGACCACTGAAACTGAGTCTCAAAACTAT 166710
| | || ||||| | | | | || | || || || |||| ||| ||| || |
Sbjct 5832 GTTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAA 5774
Query 166711 GGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACTTC 166770
|||||||| || |||||||| ||||| || || || || || |||||||||||||| ||
Sbjct 5773 GGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTT 5714
Query 166771 GGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCCTC 166830
|| || ||||||||||||| || |||||||||||||| || | || |||||| |
Sbjct 5713 GGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTA 5654
Query 166831 GCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCATTC 166890
|| || ||||| ||| ||||||| |||||||||||| | ||| |||| || ||||| |||
Sbjct 5653 GCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTC 5594
Query 166891 AACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAAC 166950
|| | || |||||||| ||||| || || | | ||| |||| |||||||| | ||
Sbjct 5593 AATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAAT 5534
Query 166951 ACTTGGGCAGATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTAAT 167010
|| || || ||| || | ||||| ||| || ||||||||||| ||||| || ||||||
Sbjct 5533 ACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 5474
Query 167011 GCTCACAACTTCCCTCTGGATCTTGCTG 167038
||||| ||||||||||| || || ||||
Sbjct 5473 GCTCATAACTTCCCTCTAGACCTAGCTG 5446
>seq7678
Length=557
Score = 401 bits (444), Expect = 7e-107
Identities = 341/420 (81%), Gaps = 0/420 (0%)
Strand=Plus/Minus
Query 166660 GTTACTTCCTCGCTCGTCCGTGAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAG 166719
||||||||||| | || ||||| ||||| ||||| || || |||||||| |||||||||
Sbjct 539 GTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTACAAG 480
Query 166720 TTTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTG 166779
|| || ||||||||||| |||||||||||||| ||||| || |||||||| ||||| ||
Sbjct 479 TTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCGGTTG 420
Query 166780 ATCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCCTCGCAGCATGG 166839
||||||||||||||||||||||||||| || || |||||||||||| | || ||||||
Sbjct 419 ATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTTCTTGGCTGCATGG 360
Query 166840 CCTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAAC 166899
|| || |||||||||||||||| ||| | ||| | ||||| ||||| |||||||| |||
Sbjct 359 CCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGCGTTCAACCTGAAC 300
Query 166900 GGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCA 166959
|| |||||||||||||| || | |||||| ||| ||||| || || ||||||||
Sbjct 299 GGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCATCGCTACTTGGGCT 240
Query 166960 GATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTAATGCTCACAAC 167019
|| || ||||||| ||| ||||||||||||| |||||||||||||| |||||||||
Sbjct 239 GACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCGTAACGCTCACAAC 180
Query 167020 TTCCCTCTGGATCTTGCTGCTGCTGAGTCCACTCCTGTGGCACTCACCGCACCTGCAATC 167079
||||| | || | ||||||| ||| |||||||||| | || ||||||||||||
Sbjct 179 TTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAACTGCACCTGCAATC 120
>seq7307
Length=548
Score = 246 bits (272), Expect = 3e-60
Identities = 344/477 (72%), Gaps = 4/477 (1%)
Strand=Plus/Plus
Query 167844 TCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAATCCATGGTG 167903
|||| ||||||||||| || ||| | || || || || | | | ||| || || || |
Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60
Query 167904 TTACAGTAGAGAATACTCTGTATGAAGATGGTGA-GCAAGCAAACACTTTCAAAGCATTT 167962
|||||||| || || | | |||||| ||||| ||| |||| || ||| || ||
Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAA-ACCTTCCGCGCCTTC 119
Query 167963 GA-TACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATTCTGGTCTCA 168021
| ||| || || | ||| ||||| || |||||||| || || |||||||||||||| ||
Sbjct 120 AACTAC-ACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACA 178
Query 168022 AATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTTTTCGTTCC 168081
|| || ||||| || ||| ||| || || ||||| |||||||| ||||| || || ||
Sbjct 179 GATATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACC 238
Query 168082 TGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAATCTTCGTGC 168141
|||| || | |||| || | || ||| | ||| | ||| | || || || ||
Sbjct 239 AGTCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGC 298
Query 168142 TTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGAAACTTTCTA 168201
||| ||||| || || || ||| | | |||||||| || ||||| |||||||| |||||
Sbjct 299 TTACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTA 358
Query 168202 TACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGACCAACC 168261
||| |||||||| | || || || || |||| || ||||||||||| ||| || ||
Sbjct 359 TACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCC 418
Query 168262 ACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCTGTGATA 168318
|| ||| | |||||||||||||| || || | || | || |||||||| | |||
Sbjct 419 TCACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAATA 475
>seq7318
Length=447
Score = 239 bits (264), Expect = 5e-58
Identities = 257/340 (76%), Gaps = 0/340 (0%)
Strand=Plus/Plus
Query 167681 AATGCGATTGCTTTTTCTGGTCCGATTGCTGTCTTTGTGTCTGTTTTTCTCATCTATCCT 167740
||||| || || ||||||||||| |||||||| ||||| ||||| ||||| || |||||
Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60
Query 167741 CTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGTTTGGTGTTGCAGCGATATTTAGATTC 167800
|| || ||| | ||||||| ||||| || |||||||| ||||| |||||| | |||
Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120
Query 167801 CTACTATTCCTACAGGGTTTCCATAACTGGACGCTCAACCCTTTCCATATGATGGGAGTT 167860
| ||||| | || || || ||||| ||||| | ||||| || |||||||||||||||
Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180
Query 167861 GCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACT 167920
|| ||| | | |||| || |||| | || || ||||||| || ||||| ||||||
Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240
Query 167921 CTGTATGAAGATGGTGAGCAAGCAAACACTTTCAAAGCATTTGATACGACTCAGGAAGAG 167980
| | |||||||||||| ||||| || ||| || ||| | | ||||| | ||
Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300
Query 167981 GAAACTTATTCCATGGTCACTGCTAACCGATTCTGGTCTC 168020
||||||||||| ||||||||||||||||| || |||||
Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCTGTCTC 340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 567168760722400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |