Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_008562.1 Length=162109 Score E Sequences producing significant alignments: (Bits) Value seq920 129 6e-25 >seq920 Length=528 Score = 129 bits (142), Expect = 6e-25 Identities = 196/279 (70%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 41884 CACCACTCCCAGACGTTCCCGTGCATATCGTAGAGTCCGAAGGCATTAGGGGGAAATTGT 41943 ||||| ||| | ||||||||||||||||||| | || ||| | ||||| | ||| Sbjct 97 CACCATTCCAAAACGTTCCCGTGCATATCGTGTAACCCAAAGCCGTTAGGTGAAAAACTG 156 Query 41944 CCCACGGGAGTCGTTTCTTCTCGATATTCTCCCTCCGCTTCCCCGGGGTAGGTATAGCTG 42003 || || || |||| ||| |||||||| || | | || | ||| || || || Sbjct 157 CCTACTTCTGTTGTTTTTTCACGATATTCGCCTTTTGGCTCAGAAGCGTAAGTGTAATTG 216 Query 42004 GCATTGTAGTTAGCCAATTCCCCGGTAATGGTTTCCCCAAAGTAAAATGGGGTGGTGGTT 42063 ||||||| ||||| || || || || || |||||||| || || || || || || Sbjct 217 CCATTGTAATTAGCTAAATCAGTTGTTATAGTCTCCCCAAAATATAACGGTGTCGTTGTA 276 Query 42064 CCAGCACGACAGGCGTATTCCCATTCTGCCTCACTCGGTAGCCGGTATTCCCTTCCGGTC 42123 || ||||||||||| ||||| || ||||| ||||| ||||| || |||||| | | || Sbjct 277 CCGGCACGACAGGCATATTCACAATCTGCTTCACTTGGTAGGCGATATTCCTTGTCTGTA 336 Query 42124 AGCTTTGATAATCTCGCGCAGAACTCGACTGCATCGTAC 42162 | ||||| | | | || |||| |||||||| ||| Sbjct 337 TGTTTTGAAAGGCGTGAGCTATACTCAACTGCATCTTAC 375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518562980263560