Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq6248 131 1e-25 seq6788 122 7e-23 seq1626 114 1e-20 seq2811 109 5e-19 seq3668 104 2e-17 seq8071 102 7e-17 seq8630 95.1 1e-14 seq5887 87.8 2e-12 >seq6248 Length=918 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | ||||| || || ||||||||||| ||| Sbjct 588 ATACCACCACGGAGACGGAGCACAAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCG 529 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || |||||| ||| |||||||| || ||||| |||| |||||||||||||| ||| Sbjct 528 GACAGAGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGTTGGTCTGGA 469 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| |||||| || | | || | ||||||| |||||| Sbjct 468 GGAATGCCCTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATAGTGTCGGAGGATTCA 409 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || ||||| || || || || || || |||||||| Sbjct 408 ACCTCGAGTGTGATGGTCTTGCCAGTAAGTGTCTTGACGAAGATCTGCAT 359 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| | |||||| ||| || ||||| || || Sbjct 327 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGACCATCCTCGAGTTGCTTGCCG 268 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| | ||||||||||| ||||||||||| || ||||| ||||| || Sbjct 267 GCGAAGATCAAGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTG 208 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| | || ||||| || | || | || |||||||| || || Sbjct 207 ACATTGTCGATGGTGTCAGAAGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTC 148 Query 114366 TTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 147 TTGACGAAGATCTGCATG 130 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 |||||||| || | || || || || | ||| || || || || |||||||| || Sbjct 813 CCGCCACGCAGACGCAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCAGAG 754 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | |||||| ||| || || || || || || |||| |||||||||||||| || || Sbjct 753 AGAGTACGCCCATCCTCCAGCTGCTTTCCTGCAAAGATAAGACGCTGTTGGTCTGGTGGG 694 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || || || ||||| |||||| || | | || | ||||| | ||||| || Sbjct 693 ATACCCTCCTTGTCCTGAATCTTGGTCTTCACGTTGTCGATAGTGTCTGAAGATTCCACC 634 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | ||| ||||| |||| || || || || || ||||| Sbjct 633 TCGAGTGTAATCGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 587 >seq6788 Length=110522 Score = 122 bits (134), Expect = 7e-23 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | ||||||||||||||||| || ||||| ||||| || ||||| || Sbjct 41402 ATACCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCA 41343 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | | ||||| | ||| |||||||| |||| | | |||||||| ||| Sbjct 41342 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGA 41283 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| ||||||| || | | |||| |||||| | ||||| Sbjct 41282 GGAATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGATTCA 41223 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374 || |||| || | || || || |||| |||||| |||||| Sbjct 41222 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAAA 41181 >seq1626 Length=97905 Score = 114 bits (126), Expect = 1e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | |||||| |||||||||| || ||||| |||||||||||||| ||| Sbjct 62561 ATACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCG 62620 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | | ||||| | ||| |||||||| |||| | | |||||||| || Sbjct 62621 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 62680 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||||||||| |||||| ||| | | |||| |||||| | ||||| Sbjct 62681 GGGATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCA 62740 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373 || || | || | ||||| || |||| ||| || || || Sbjct 62741 ACTTCTAGAGTGATGGTTTTACCAGTCAAAGTCTTAACGAA 62781 >seq2811 Length=58406 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | |||||| || || || | |||||||| || |||||||||||||| Sbjct 27194 ATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCA 27253 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | | ||||| ||||| ||||| || | || | | ||||| || ||| Sbjct 27254 GACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGA 27313 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| ||| || ||| | | |||| ||||||| ||||| Sbjct 27314 GGAATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCA 27373 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || || || |||||||| || ||||| ||||| Sbjct 27374 ACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27423 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | |||||| || || || | |||||||| ||||| |||||||| || Sbjct 27422 ATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA 27481 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | | ||||| || || ||||| || |||| | | ||||| || ||| Sbjct 27482 GACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 27541 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT-TCAACGGTGTCGGTGGATTC 114331 || || ||||| ||||| ||| ||| | ||| | | || | |||||||| ||||| Sbjct 27542 GGGATACCTTCCTTGTCTTGAAT-TTTCGACTTAACGTTGTCGATGGTGTCGGAAGATTC 27600 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||| ||||||| ||| || || ||||||||||| Sbjct 27601 AACCTCTAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 27651 >seq3668 Length=38538 Score = 104 bits (114), Expect = 2e-17 Identities = 156/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | | |||||| ||||| || | || |||||||||||||||||||| || Sbjct 7885 ATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCA 7944 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | | ||||| | ||| |||||||| |||| | | |||||||| || Sbjct 7945 GACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 8004 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||||||| || | | |||| ||||| | ||||| Sbjct 8005 GGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCA 8064 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374 || |||| || | || || || |||| ||| || |||||| Sbjct 8065 ACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 8106 >seq8071 Length=459 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| || || | ||||| || || || |||||||| || Sbjct 205 ATACCACCACGAAGACGGAGAACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCA 264 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| ||||| || || || || |||| |||||||| ||||| ||| Sbjct 265 GAAAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGA 324 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| || | | || | |||||||| || || Sbjct 325 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCA 384 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | || |||||||||| || || || ||||| |||||| Sbjct 385 ACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAAATTTGCATG 435 >seq8630 Length=306 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || ||||||||||| | ||| ||| ||| || ||||| || || Sbjct 304 GTGGACTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGACCATCCTCGAGTTGCTTTCCG 245 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| | |||||||| ||||| || || || || || || ||||| |||||| || Sbjct 244 GCGAAAATGAGACGTTGTTGATCAGGTGGGATCCCCTCCTTGTCCTGAATCTTGCTCTTA 185 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| || || || || | ||| | || ||||| |||||||| Sbjct 184 ACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTC 125 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 124 TTGACGAAGATCTGCAT 108 >seq5887 Length=461 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | || || | ||||| || ||||| | ||| |||||||| || Sbjct 264 ACCACCACGGAGACAGAAGACGAGATGTAGAGTCGATTCCTATTGGATGTTGTAGTCCAA 205 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || || ||| |||||||| || |||||| |||| | || | |||||| || || Sbjct 204 AAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCGAAGATCAAGCGTTATTGGTCGGGTGG 145 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 || ||||| ||||| ||||| || | | || | ||| || | || || || Sbjct 144 GATTCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCCAC 85 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | || ||||| ||||| || || || ||||||||||| Sbjct 84 CTCGAAGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAAATCTGCAT 37 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420088731259428