Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_009016.1 Length=38197 Score E Sequences producing significant alignments: (Bits) Value seq1118 138 3e-28 >seq1118 Length=545 Score = 138 bits (152), Expect = 3e-28 Identities = 268/393 (68%), Gaps = 2/393 (1%) Strand=Plus/Minus Query 21161 AACGACGTGAACAGCGACCTGGTTAACCTGTACCGCGTGGTGCAGCATCACCTCGAGGAG 21220 ||||| | ||||| || | |||||||||||| | || | ||| | || || || ||| Sbjct 545 AACGATATCAACAGTGATATCGTTAACCTGTACAGGGTAATCCAGAACCATCTGGAAGAG 486 Query 21221 TTCGTCCGCCAGTTCAAATGGGCGCTTATCAGCCGCGAGATGTTCAAGTGGCTGGACGAT 21280 || | ||||| |||||||| | | ||||||||| || ||| |||| || | ||| Sbjct 485 TTTATAAAGCAGTTTAAATGGGCTTTAACCAGCCGCGAAATATTCCAGTGTCTCAAGGAT 426 Query 21281 ACGCCCGTCGAGACCCTGACCGATATTCAGCGTGCTGCCCGGTTCTATTACCTGCAGCAG 21340 || ||| || || ||||| ||||| |||||||| ||| | || ||||| || ||| | Sbjct 425 ACTCCCCCTGAAACGCTGACTGATATACAGCGTGCGGCCAGATTTTATTATCTACAGAAA 366 Query 21341 ATGGGCTTCGGCGCCAAGATTACCGGCCGCACCTTTGGCACGGCCACCACTACGCCGC-C 21399 | ||||| |||||| | || || || |||||||| | || | ||| | | Sbjct 365 TTATCTTTCGGGGCCAAGGTCGAGGGACGAACATTTGGCACCAATGCGAC-AGGCCCCTC 307 Query 21400 AAAACTGAACCTGCTGCGCCTCGAGGAGACGCTAAGCCAGGCGCACCTACGCCTGAGCCG 21459 ||| | |||||||| || || || || ||||| |||| | || || ||| Sbjct 306 GAAATTAAACCTGCTACGGCTGGAAGAAACGCTGTCAGAGGCCTGGTTGCGGTTGCACCG 247 Query 21460 TGTTTACGTTGAGCACCTGGACTGGCAGGCGTGCATGGAAAAGTACGACCGACCGCACAC 21519 || | ||||| ||||||||| | | ||||| || ||| | || |||| Sbjct 246 GGTAACAATAGAGCATCTGGACTGGAAAACATGCATAACCCGTTATGACAGGCCTGACAC 187 Query 21520 CCTGTTTTACCTCGACCCGCCGTACTGGCAGAC 21552 ||||||||||| ||||||||||||||||| || Sbjct 186 GCTGTTTTACCTTGACCCGCCGTACTGGCAAAC 154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122095867075402