Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq4483 129 1e-24 seq8630 123 6e-23 seq6248 120 7e-22 seq5887 114 3e-20 seq3354 111 4e-19 seq2811 105 2e-17 seq4535 104 6e-17 seq8071 102 2e-16 seq4029 96.9 8e-15 >seq4483 Length=688 Score = 129 bits (142), Expect = 1e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| |||| ||| || || ||||| || ||||||| | Sbjct 415 CCACCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 474 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || ||||||||||||| ||||| || ||| Sbjct 475 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCGGGGGGG 534 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || || || || || | ||| ||| || || Sbjct 535 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCGATGGTGTCGGACGACTCCACC 594 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || ||||| ||||| || || || ||||||||||| |||||||| ||| Sbjct 595 TCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATGATG 645 >seq8630 Length=306 Score = 123 bits (136), Expect = 6e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || || | ||| ||||| || || || | ||| ||||| ||||| Sbjct 298 TCCTTCTGGATGTTGTAATCAGAGAGAGTGCGACCATCCTCGAGTTGCTTTCCGGCGAAA 239 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTT 288401 || ||||| |||||| | |||||| || || || ||||| || || ||| || || || Sbjct 238 ATGAGACGTTGTTGATCAGGTGGGATCCCCTCCTTGTCCTGAATCTT-GCTCTTAACATT 180 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| || || || ||||| ||||| ||||| || |||||||||||||| Sbjct 179 GTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 120 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 119 GAAGATCTGCAT 108 >seq6248 Length=918 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | ||| || || || || || | || |||||||| ||| Sbjct 777 TCCTTCTGGATGTTGTAGTCAGAGAGAGTACGCCCATCCTCCAGCTGCTTTCCTGCAAAG 718 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||||||||| |||||| || || || ||||| || || | |||||||| Sbjct 717 ATAAGACGCTGTTGGTCTGGTGGGATACCCTCCTTGTCCTGAATCTTGGTCTTCACGTTG 658 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || ||||| || ||||| || |||||||| || |||| ||||||||| Sbjct 657 TCGATAGTGTCTGAAGATTCCACCTCGAGTGTAATCGTCTTGCCCGTCAAGGTCTTGACG 598 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 597 AAGATTTGCAT 587 Score = 116 bits (128), Expect = 9e-21 Identities = 143/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||||| || || || || || || | ||| ||||| || ||| Sbjct 549 TCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAG 490 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||||||||||||| ||||| || || || || ||||| || || | || ||| Sbjct 489 ATCAGACGCTGTTGG---TCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTGACG 433 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || |||| ||| ||||| || ||||| ||||| ||||| || || || |||||| Sbjct 432 TTGTCGATAGTGTCGGAGGATTCAACCTCGAGTGTGATGGTCTTGCCAGTAAGTGTCTTG 373 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 372 ACGAAGATCTGCAT 359 Score = 111 bits (122), Expect = 4e-19 Identities = 144/198 (73%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| || || || || || | ||| || || |||||| Sbjct 321 TCCTTCTGGATGTTGTAGTCGGAGAGGGTACGACCATCCTCGAGTTGCTTGCCGGCGAAG 262 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| |||||||| ||||| || || || || |||||||| || | || || Sbjct 261 ATCAAGCGCTGTTGG---TCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACA 205 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || || || || ||||| ||||| ||||| ||||| || |||||| Sbjct 204 TTGTCGATGGTGTCAGAAGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTG 145 Query 288460 ACGAATATCTGCATTATG 288477 ||||| |||||||| ||| Sbjct 144 ACGAAGATCTGCATGATG 127 >seq5887 Length=461 Score = 114 bits (126), Expect = 3e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | | |||||||| | || ||| | |||||| || ||||| Sbjct 263 CCACCACGGAGACAGAAGACGAGATGTAGAGTCGATTCCTATTGGATGTTGTAGTCCAAA 204 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | ||| || || |||||||||| || | ||| |||| Sbjct 203 AGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCGAAGATCAAGCGTTATTGGTCGGGTGGG 144 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || |||||||| || | || || || || || | ||| || || || Sbjct 143 ATTCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTATCAGAAGACTCCACC 84 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 |||| ||||| ||||| || ||||| ||||| ||||| ||||||||| || Sbjct 83 TCGAAGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAAATCTGCATTTTG 33 >seq3354 Length=695 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | |||||||| ||||| || | || || || |||||| Sbjct 276 TCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAG 335 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| ||||| || | ||||| || || || ||||| || || || || || || Sbjct 336 ATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTG 395 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 | || | || || || || ||||| || || ||||| || ||||||||||||||| Sbjct 396 TTGATGGTGTCCGAGGACTCCACCTCGAGGGTAATGGTCTTACCCGTCAGAGTCTTGACG 455 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 456 AAAATCTGCAT 466 >seq2811 Length=58406 Score = 105 bits (116), Expect = 2e-17 Identities = 143/198 (72%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||| | | || | |||||||||| || || || || || Sbjct 27460 TTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAA 27519 Query 288342 GATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||||| | |||||| ||||| ||| ||||| || || || ||||||| || || Sbjct 27520 GATCAATCTTTGTTGA---TCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTAAC 27576 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||| || || | ||| ||||| || || | || || || || ||||||| |||||| Sbjct 27577 GTTGTCGATGGTGTCGGAAGATTCAACCTCTAATGTTATGGTTTTACCGGTCAAAGTCTT 27636 Query 288459 GACGAATATCTGCATTAT 288476 |||||| |||||||| || Sbjct 27637 GACGAAAATCTGCATAAT 27654 >seq4535 Length=12927 Score = 104 bits (114), Expect = 6e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| | || | || ||||| ||||| || || || || Sbjct 8281 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 8222 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | ||||| | ||| || ||||| || || ||||| || | || || || Sbjct 8221 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 8162 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || ||||| ||||| || || || ||||| ||||| | ||||||||| Sbjct 8161 GTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGAC 8102 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 8101 GAAAATTTGCAT 8090 >seq8071 Length=459 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || ||||| || || || | || || || || ||| Sbjct 244 TCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAG 303 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || | || || || || || |||||||| || | || ||||| Sbjct 304 ATAAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 363 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| || || || ||||| ||||| ||||| ||||||| ||||||||| Sbjct 364 TCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACG 423 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 424 AAAATTTGCAT 434 >seq4029 Length=108955 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || ||||| | | || | |||||||| ||||| || || || ||| Sbjct 14259 TCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAG 14200 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||||| | ||| || ||||| || || || || || | || || || Sbjct 14199 ATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTAGACTTGACATTG 14140 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || ||||| ||||| || || || ||||| ||||| | |||||||||| Sbjct 14139 TCAATAGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACG 14080 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 14079 AAAATTTGCAT 14069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179519595362082