Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq3136 132 1e-25 seq6114 96.9 8e-15 seq2428 91.5 3e-13 >seq3136 Length=29851 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 334137 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 334196 |||| |||||||||||| ||| |||| | ||||| || ||||||||| |||| Sbjct 5713 TCGATATCGTGTTCCACATAAACAGTGCGACATTCATCCTGAGTGGGGAACCCGTCAACT 5654 Query 334197 TGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 334256 || || || |||| | ||||| ||||| ||||| || || || || || ||||| ||| Sbjct 5653 TGGCCATTAGCAATGGATCGCATTAGAGTGGATTTTCCGGCACCATTAGGACCACATAGA 5594 Query 334257 CCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCA 334316 || || | | || ||||||| | || | || ||||| || | ||||| ||||| Sbjct 5593 CCATATCTCCTACCTCGCTTCAACCTCAATTGAGTCTTGTTTAGTAATATTTTGGCACCA 5534 Query 334317 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 ||||||| ||||||||||||| ||||| ||| ||||| Sbjct 5533 TATGCCAAGGAAAATTCACAATTACACAAATCTTCACC 5496 >seq6114 Length=709 Score = 96.9 bits (106), Expect = 8e-15 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 333315 TCTTTGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGA 333374 || || ||||||||| | |||||||||||||||||| || ||||| || |||||||| Sbjct 399 TCCTTATCTTCACCGAATTGATAACGCCATTGGATATATTGATTGGGGGTTTTGTCAAGA 340 Query 333375 TGATCCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGC 333434 ||| || | || ||||| ||||| || || || || |||| ||| | | ||||| Sbjct 339 TGACGTTCTAAATGATGGAAGGCATGTTGGGCAACATAGGCAACACGTAACATAGGATGT 280 Query 333435 TTCCAAACACTT--CCGTTGGTGGCTTCCATTTGCCCCGTGAGCACCTTAATGAGAGTGC 333492 ||| || |||| || || |||| ||||| || || || | |||||| | ||| Sbjct 279 TTC--AATACTTCACCATTAGTGGGAGGCATTTCACCAGTAAGAATCTTAATCATAGTAG 222 Query 333493 TTTTTCCCGCACCATT 333508 ||| || ||||| || Sbjct 221 ATTTACCAGCACCGTT 206 >seq2428 Length=31152 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 334137 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 334196 |||| ||||||||||| ||| | || | |||| || |||||| || |||| Sbjct 5629 TCGATGTCGTGTTCCACATAAACGGTGCGACATTCATCTTGAGTGGGGAAGCCGTCAACT 5570 Query 334197 TGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 334256 ||||| || ||| | ||||| ||||| ||||| || || || || |||||||| ||| Sbjct 5569 TGACCATTGGCAACCGAACGCATTAGAGTGGATTTCCCAGCACCATTAGGCCCACATAGA 5510 Query 334257 CCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCA 334316 || || | | || | |||| | | | || ||||| || | || || ||||| Sbjct 5509 CCATACCTTCTACCCCTTTTCAACCTTAGTTGAGTTTTGTTTAGCAAGATCTTGGCACCA 5450 Query 334317 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 ||||||| |||||| ||||| | ||| | ||| ||||| Sbjct 5449 TATGCCAAAGAAAACTCACAGTTACATAAATCTTCACC 5412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102753968732650