Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq3136 132 1e-25
seq6114 96.9 8e-15
seq2428 91.5 3e-13
>seq3136
Length=29851
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 334137 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 334196
|||| |||||||||||| ||| |||| | ||||| || ||||||||| ||||
Sbjct 5713 TCGATATCGTGTTCCACATAAACAGTGCGACATTCATCCTGAGTGGGGAACCCGTCAACT 5654
Query 334197 TGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 334256
|| || || |||| | ||||| ||||| ||||| || || || || || ||||| |||
Sbjct 5653 TGGCCATTAGCAATGGATCGCATTAGAGTGGATTTTCCGGCACCATTAGGACCACATAGA 5594
Query 334257 CCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCA 334316
|| || | | || ||||||| | || | || ||||| || | ||||| |||||
Sbjct 5593 CCATATCTCCTACCTCGCTTCAACCTCAATTGAGTCTTGTTTAGTAATATTTTGGCACCA 5534
Query 334317 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
||||||| ||||||||||||| ||||| ||| |||||
Sbjct 5533 TATGCCAAGGAAAATTCACAATTACACAAATCTTCACC 5496
>seq6114
Length=709
Score = 96.9 bits (106), Expect = 8e-15
Identities = 140/196 (71%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 333315 TCTTTGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGA 333374
|| || ||||||||| | |||||||||||||||||| || ||||| || ||||||||
Sbjct 399 TCCTTATCTTCACCGAATTGATAACGCCATTGGATATATTGATTGGGGGTTTTGTCAAGA 340
Query 333375 TGATCCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGC 333434
||| || | || ||||| ||||| || || || || |||| ||| | | |||||
Sbjct 339 TGACGTTCTAAATGATGGAAGGCATGTTGGGCAACATAGGCAACACGTAACATAGGATGT 280
Query 333435 TTCCAAACACTT--CCGTTGGTGGCTTCCATTTGCCCCGTGAGCACCTTAATGAGAGTGC 333492
||| || |||| || || |||| ||||| || || || | |||||| | |||
Sbjct 279 TTC--AATACTTCACCATTAGTGGGAGGCATTTCACCAGTAAGAATCTTAATCATAGTAG 222
Query 333493 TTTTTCCCGCACCATT 333508
||| || ||||| ||
Sbjct 221 ATTTACCAGCACCGTT 206
>seq2428
Length=31152
Score = 91.5 bits (100), Expect = 3e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 334137 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 334196
|||| ||||||||||| ||| | || | |||| || |||||| || ||||
Sbjct 5629 TCGATGTCGTGTTCCACATAAACGGTGCGACATTCATCTTGAGTGGGGAAGCCGTCAACT 5570
Query 334197 TGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 334256
||||| || ||| | ||||| ||||| ||||| || || || || |||||||| |||
Sbjct 5569 TGACCATTGGCAACCGAACGCATTAGAGTGGATTTCCCAGCACCATTAGGCCCACATAGA 5510
Query 334257 CCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCA 334316
|| || | | || | |||| | | | || ||||| || | || || |||||
Sbjct 5509 CCATACCTTCTACCCCTTTTCAACCTTAGTTGAGTTTTGTTTAGCAAGATCTTGGCACCA 5450
Query 334317 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
||||||| |||||| ||||| | ||| | ||| |||||
Sbjct 5449 TATGCCAAAGAAAACTCACAGTTACATAAATCTTCACC 5412
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102753968732650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |