Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq8071 113 5e-20 seq2811 109 5e-19 seq6788 100 3e-16 seq3354 96.9 3e-15 seq3668 95.1 1e-14 seq1626 93.3 4e-14 seq7783 91.5 1e-13 seq6248 91.5 1e-13 seq4483 87.8 2e-12 seq3690 87.8 2e-12 seq4535 84.2 2e-11 >seq8071 Length=459 Score = 113 bits (124), Expect = 5e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || | | |||||| | || ||||||||||||||| Sbjct 238 GTAGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCAAGCTGCTTGCCG 297 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || ||||||||||| |||||||| || || || || || || || ||| Sbjct 298 GCAAAGATAAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 357 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || | || || || | || | ||||||||||||||| || Sbjct 358 ACGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTC 417 Query 64427 TTTACGAAAATTTGCATTTT 64446 || |||||||||||||| || Sbjct 418 TTGACGAAAATTTGCATGTT 437 >seq2811 Length=58406 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | ||| | |||| || ||||| ||||| |||||||| || | Sbjct 27424 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 27483 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | ||||||| |||||||| |||||| | || | | || || || ||||| Sbjct 27484 CAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 27543 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| ||||| ||| || || | || || | || || Sbjct 27544 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTGTCGGAAGATTCAAC 27603 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| |||| ||| || ||||||||||| || |||||||| ||||| Sbjct 27604 CTCTAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 27651 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | ||| || |||| || || || || |||||||| ||||| | Sbjct 26968 ACCACCCCTCAATCTCAACACAAGGTGAAGAGTAGACTCCTTCTGAATGTTATAATCAGA 27027 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | ||||||| || ||||| |||||| |||| | | || || || ||||| Sbjct 27028 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 27087 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| ||||| ||| || || | || || | || || Sbjct 27088 AATACCTTCCTTGTCTTGAATTTTCGACTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 27147 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| |||| ||||| || || | |||||| |||||||||||||| Sbjct 27148 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27195 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | ||| | |||| || ||||| || |||||||||||||| | Sbjct 27196 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGA 27255 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | ||||||| || ||||| |||||| |||| | | || || || ||||| Sbjct 27256 CAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGG 27315 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| ||||| || || || | || || | || || Sbjct 27316 AATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 27375 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| |||| ||||| || || | |||||| |||||||||||||| Sbjct 27376 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27423 >seq6788 Length=110522 Score = 100 bits (110), Expect = 3e-16 Identities = 154/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| ||| | || ||||| ||||| || ||||| || | Sbjct 41400 ACCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGA 41341 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | ||||||| | ||||| || ||| | || | | || ||||| ||||| Sbjct 41340 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGG 41281 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || ||| ||| ||| || | || ||| | || || Sbjct 41280 AATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAAC 41221 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 ||| | ||| | |||||| || ||||||||||| || ||| Sbjct 41220 TTCCAAAGTGATGGTCTTACCAGTCAAAGTTTTGACAAAA 41181 >seq3354 Length=695 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || || || || | ||||| || || || |||||||| || | Sbjct 239 ACCACCACGCAGACGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 298 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| |||| || |||||||||||||| | || || ||||||||||| || || Sbjct 299 AAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGG 358 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| ||| | | || || || ||||| Sbjct 359 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTGTTGATGGTGTCCGAGGACTCCAC 418 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||| || |||| ||| || |||||||| ||||| Sbjct 419 CTCGAGGGTAATGGTCTTACCCGTCAGAGTCTTGACGAAAATCTGCAT 466 >seq3668 Length=38538 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| || | || |||||||||||||||||||| || | Sbjct 7887 ACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 7946 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | ||||||| | ||||| || ||| | || | | || ||||| || || Sbjct 7947 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 8006 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| || ||| ||| ||| || | || ||| | || || Sbjct 8007 GATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 8066 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 ||| | ||| | |||||| || |||||||| || || ||| Sbjct 8067 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 8106 >seq1626 Length=97905 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | |||| ||| | || ||||| |||||||||||||| || | Sbjct 62563 ACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGA 62622 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | ||||||| | ||||| || ||| | || | | || ||||| || || Sbjct 62623 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 62682 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || |||||||| ||||| || || || ||| || | || ||| | || || Sbjct 62683 GATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAAC 62742 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434 ||||| ||| | ||| || || |||||||| || ||||| Sbjct 62743 TTCTAGAGTGATGGTTTTACCAGTCAAAGTCTTAACGAA 62781 >seq7783 Length=540 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 64246 CGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCC 64305 |||||| || || || |||||||| || | | ||||| |||| || |||||||| || Sbjct 195 CGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGCTGCTTTCC 136 Query 64306 GGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTT 64365 ||| | || || |||||||| ||||| || || ||||| || ||||| || || ||| Sbjct 135 TGCAAAGATAAGTCGCTGCTGATCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTT 76 Query 64366 TACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || || | || ||| || || || || | || | |||||||||||| | ||| Sbjct 75 GACGTTGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGT 16 Query 64426 TTTTACGAAAATTTG 64440 || || || || || Sbjct 15 CTTAACAAAGATCTG 1 >seq6248 Length=918 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || ||||| | || || || || | || || || || || |||||||| || | Sbjct 358 ACCACCACGCAAACGGAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 299 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||| || | || || || ||||||||||| | || | ||||| ||||| ||||| Sbjct 298 GAGGGTACGACCATCCTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGGTCTGGAGG 239 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| ||| || | || ||| | || || Sbjct 238 AATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCGATGGTGTCAGAAGACTCGAC 179 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | |||||||||||| | || || ||||| || ||||| Sbjct 178 CTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 131 >seq4483 Length=688 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||||| || |||| || || || || || |||||||| || | Sbjct 414 ACCACCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 473 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| |||| || ||||||||||| || | || | |||||||||||||| || Sbjct 474 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCGGGGGG 533 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| ||| || | || || | ||||| Sbjct 534 GATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCGATGGTGTCGGACGACTCCAC 593 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||| || || | || || ||||| || ||||| Sbjct 594 CTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 641 >seq3690 Length=234713 Score = 87.8 bits (96), Expect = 2e-12 Identities = 208/305 (68%), Gaps = 7/305 (2%) Strand=Plus/Plus Query 155182 CCAA-ACCTCC-GCCGTATTTAGATATTTGCGCACAGTCCGCCAAAGTTTCGTACATTCC 155239 |||| |||||| || || |||||| || ||||| ||| |||||| ||||| || || Sbjct 184018 CCAATACCTCCAGCAGT-TTTAGAAATCAAAGCACATTCCTTCAAAGTATCGTAAATACC 184076 Query 155240 TTTGATGCTGTCTTCTTTCAACGTCAAC-AAGAAACACGAAGATAATTGAGGTTGAGGGC 155298 || ||| || || |||| | |||| |||||||| || || | |||||| | || Sbjct 184077 TTCAATGGAATCATCCTTCATTG-CAACTAAGAAACAGGAGGACATTTGAGGCTTTGGAG 184135 Query 155299 AGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAAC-ATTTTGTTGGCGGTTAAGTTG 155357 || || ||||| || ||| || || ||||| ||||| | | ||||||| Sbjct 184136 TACCAGCGTTGAATAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACA-TTAAGTTA 184194 Query 155358 TAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCATCAGC 155417 || ||||| | ||||| ||||||| |||||| ||||| | || || | ||| | Sbjct 184195 TAGGTTTCTAAAGCGGCCTCAATGTTTTCACCGTGAATACCTAGGGCGACTCTCATGATT 184254 Query 155418 ATGTGTTGAATGCGCTCCGCAACGCGGCCGTTGATGCGCTTTAAGTACCCATTTTCCAAA 155477 | ||| || || || ||||| | |||||||| | | |||||| | ||||||| Sbjct 184255 AAGTGCTGTGGACGTTCAGCAACTTGACCGTTGATTCTCAATAAGTAAGAACGTTCCAAA 184314 Query 155478 GTTTT 155482 ||||| Sbjct 184315 GTTTT 184319 >seq4535 Length=12927 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| | || | || | || ||||| ||||| |||||||| || | Sbjct 8317 ACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 8258 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | | ||||| | ||||| || ||| | || | | || ||||| || || Sbjct 8257 CAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 8198 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || || ||| ||| || | || ||| | || || Sbjct 8197 AATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 8138 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||| | || | ||||| ||||| ||||| || |||||||||||||| || Sbjct 8137 TTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499589095850360