Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_010342.1 Length=39245 Score E Sequences producing significant alignments: (Bits) Value seq1118 89.7 1e-13 >seq1118 Length=545 Score = 89.7 bits (98), Expect = 1e-13 Identities = 148/210 (70%), Gaps = 8/210 (4%) Strand=Plus/Minus Query 21742 TGGACTGGAAAGCGGTCATGAAGCGCTACGACCGGCCGCACACGTTGCACTATCTCGACC 21801 ||||||||||| | ||| | || || ||| |||| ||||| || || || |||| Sbjct 229 TGGACTGGAAAACATGCATAACCCGTTATGACAGGCCTGACACGCTGTTTTACCTTGACC 170 Query 21802 CGCCGTATTGGGCGACCGCTGGCTATGATTGCGA---GTTCCCGTTCGAGGAGTATGAGG 21858 ||||||| ||| || | || || | ||| |||| | | || ||||||| | Sbjct 169 CGCCGTACTGGCAAACGCCAGGTTACG---GCGTACCGTTCGGGCTTGAAGAGTATGCCG 113 Query 21859 CGATGGCCACGCTTGCGCGGGAGGTGC-AGGGGAAGGTGATCATCTCGATCAACGATCAC 21917 | ||||| || || || || ||| |||||||| |||| ||||| | ||||||||| Sbjct 112 CAATGGCGGAACTGGCACGC-AGATGCCAGGGGAAGATGATTATCTCAGTTAACGATCAC 54 Query 21918 CCTGACATACGCCAGGTGTTCGACGGGCTG 21947 || ||||| |||| |||||| || |||||| Sbjct 53 CCGGACATGCGCCGGGTGTTTGAGGGGCTG 24 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125449111885146