Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3690 134 1e-26 seq3582 109 5e-19 seq2922 109 5e-19 seq2369 87.8 2e-12 >seq3690 Length=234713 Score = 134 bits (148), Expect = 1e-26 Identities = 474/732 (65%), Gaps = 19/732 (3%) Strand=Plus/Minus Query 93907 TTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCC 93966 |||||||| || || || ||| || ||||| || |||||| | | | | |||| Sbjct 184148 TTCAACGCTGGTACTCCAAAGCCTCAAATGTCCTCCTGTTTCTTAGTTGCAATGAAGGAT 184089 Query 93967 GACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCG 94026 || ||||| || |||| ||| | | ||||| ||||| || || ||| || Sbjct 184088 GATTCCATTGAAGGTATTTACGATACTTTGAAGGAATGTGCTTTGATTTCTAAAACTGCT 184029 Query 94027 GGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACC 94086 || || || || | | ||||| || | ||||| | || || ||||| ||||| Sbjct 184028 GGAGGTATTGGTCTACATATCCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACA 183969 Query 94087 AATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTAC 94146 || || || || ||||| | | |||||| |||| ||||||||||| | || || || Sbjct 183968 AACGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAATACTGCCCGTTAT 183909 Query 94147 GTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCAC 94206 || ||||| |||||| | ||| ||| | || || | ||| | ||||| |||||| Sbjct 183908 GTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCAC 183849 Query 94207 GCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA---GG 94263 || || | | ||||||||| | ||||||| ||||| || || || | | Sbjct 183848 GCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGA---AGAAATCCGT 183792 Query 94264 GCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAA 94323 || ||||| | ||| ||||| ||||| ||||| ||||| ||||| || ||||| || Sbjct 183791 GCGAGAGATTTATTCCCTGCTCTATGGGTTCCAGATCTTTTCATGAAGCGTGTCGAAGAA 183732 Query 94324 AACTCCGCCTGGAGTCTTTTTTGTC-CCAATGAATGTCCC-GGACTGTCCGACGTTTGTG 94381 ||| | | |||| |||| || || || | || ||| || || ||| || | Sbjct 183731 AACGGCACTTGGA--CTTTATTCTCTCCTACATCTGCCCCAGGCTTGAGTGACTGTTACG 183674 Query 94382 GATCGCGTTTTGAAGACTTGTATGCTCGTTACG-AATCGCAGGGCAAGGCCAGGAAGGTT 94440 | || |||| | | ||| | ||||||| || | ||| | | | ||| | Sbjct 183673 GTGATGAATTCGAAGCCCTATATACCCGTTACGAAAAAGAAGGTCGTG----GTAAGACT 183618 Query 94441 ATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCC 94500 || | || || | ||| | ||| |||| | ||| ||| || ||||| || Sbjct 183617 ATCAAGGCCCAAAAATTATGGTACTCTATCTTGGAAGCACAAACGGAAACTGGTACACC- 183559 Query 94501 TACATCTTGTT--CAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGA 94558 | | ||||| |||||| || ||| || |||||||| || || | || || | Sbjct 183558 -ATTTGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTA 183500 Query 94559 TCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTG 94618 ||||| || ||| ||||| || ||||| || || || |||| || |||| ||||| Sbjct 183499 TCAAGTCATCTAATTTGTGCTGTGAAATTGTTGAATACTCTGCTCCAGATGAGACTGCTG 183440 Query 94619 TGTGTAACCTGG 94630 | |||||| ||| Sbjct 183439 TTTGTAACTTGG 183428 >seq3582 Length=113103 Score = 109 bits (120), Expect = 5e-19 Identities = 472/737 (64%), Gaps = 17/737 (2%) Strand=Plus/Plus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| || || || || || || || || || || |||||||| ||||||||||| Sbjct 81495 CCCCCACACTATTTAATGCCGGTACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTG 81554 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | | |||| ||||||||| || |||| ||||| | || || ||||| | || | Sbjct 81555 CCATGAAGGACGACTCCATTGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTT 81614 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075 | || || || || | || | | || || | | ||| ||| || || || | Sbjct 81615 CCAAGACTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATA 81674 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 | |||||||| || || || ||||| | | || ||| |||| |||||||||||| Sbjct 81675 TTGCAGGTACCAACGGTACTTCAAACGGGTTGATTCCCATGATCCGTGTCTTCAACAACA 81734 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195 | || || ||||||||||| |||||| | ||| ||| | || || | | | | Sbjct 81735 CTGCACGTTACGTGGACCAAGGTGGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGG 81794 Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255 |||| ||||| || ||| | | || |||| | |||||| || || || || Sbjct 81795 AGCCATGGCATGCAGACATCTTCGACTTTGTCGATATCAGAAAGACTCATGGTAAGGA-- 81852 Query 94256 TGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 || | | || ||||| | ||| ||||| ||| | || || ||||| ||||| | Sbjct 81853 -AGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCCGATCTTTTCATGAAGC 81911 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTC-CCAATGAATGTCCC-GGACTGTC 94370 | ||||| | | ||||||| | || || || |||| || ||| || || Sbjct 81912 GTGTCGAAGAGGATGGGGCCTGGA--CCTTATTCTCACCAAGTGCTGCCCCAGGTTTGGA 81969 Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430 ||||||||| || || ||||| | ||| | ||||||||| || | | | | Sbjct 81970 CGACGTTTGGGGTGAAGAATTCGAAGAGCTATATACCCGTTACGAA----AGAGAAGGTC 82025 Query 94431 CAGG-AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 || || || | ||| ||| | ||| | ||| || | | ||| || | Sbjct 82026 GTGGTAAAACCATCAAGGCTCAAAAGGTATGGTACGCCATCTTGCAAGCACAAACAGAAA 82085 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548 | ||||| |||| ||| | | ||||| |||| ||| ||| ||||||| ||| || Sbjct 82086 CCGGTACACCCTTCATGGTTTATAAGGATGCCTGT-AACAGAAAGACCAACCAACAGAAC 82144 Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608 || || ||||| || || |||| ||| || ||||||||| |||| || || Sbjct 82145 CTGGGTACCATCAAATCGTCAAACTTGTGTTGCGAAATCGTCGAGTATTCTTCCCCAGAT 82204 Query 94609 GAGATTGCTGTGTGTAA 94625 || | |||||| ||||| Sbjct 82205 GAAACTGCTGTTTGTAA 82221 >seq2922 Length=128268 Score = 109 bits (120), Expect = 5e-19 Identities = 288/437 (66%), Gaps = 7/437 (2%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| | || || ||||||| || || || || || || ||||| || |||||| || Sbjct 121893 GCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTG 121952 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | | | |||| ||||| ||| || |||| ||||| | | ||||| ||||| Sbjct 121953 GTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTG 122012 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 || || ||| || || || || || | | |||| || | ||| | | ||||| Sbjct 122013 ATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCT 122072 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 ||||| ||||| || || || || ||||| | | |||||| | || || ||||| Sbjct 122073 TACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAAT 122132 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || || || || |||||||||||| | ||| ||| | || || | || Sbjct 122133 AACACTGCCCGTTATGTTGACCAGGGTGGTAACAAGAGACCTGGTGCGTTTGCCCTTTAC 122192 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 || || || ||||| || || | | ||| || || | | ||||||||||| || Sbjct 122193 CTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGGTAAA 122252 Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || ||| | | || ||||| | ||| ||||| ||| | || || ||||| ||| Sbjct 122253 GA---GGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATG 122309 Query 94309 AAACGCGTCG-AGAAAA 94324 || || |||| |||||| Sbjct 122310 AAGCGTGTCGAAGAAAA 122326 >seq2369 Length=47450 Score = 87.8 bits (96), Expect = 2e-12 Identities = 209/316 (66%), Gaps = 0/316 (0%) Strand=Plus/Plus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 |||| || | |||||||| || || || || || |||||||| |||||| | || Sbjct 27126 CCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATGTTTCTTAATTG 27185 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | | |||| ||||| ||| || |||| || | | || || ||||| | || | Sbjct 27186 CCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTT 27245 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075 | ||| || || || | || | | || || || | ||| ||| ||||| || | Sbjct 27246 CCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTCTTATA 27305 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 || |||||||| || || || ||||| | | |||||| | || || ||||| || Sbjct 27306 TCGCTGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATA 27365 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195 | || || || ||||||||||||||| | ||| ||| ||||||| | | | | Sbjct 27366 CTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGG 27425 Query 94196 AGCCCTGGCACGCGGA 94211 |||| ||||| || || Sbjct 27426 AGCCATGGCATGCAGA 27441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494668044547240