Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq3690 134 1e-26
seq3582 109 5e-19
seq2922 109 5e-19
seq2369 87.8 2e-12
>seq3690
Length=234713
Score = 134 bits (148), Expect = 1e-26
Identities = 474/732 (65%), Gaps = 19/732 (3%)
Strand=Plus/Minus
Query 93907 TTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCC 93966
|||||||| || || || ||| || ||||| || |||||| | | | | ||||
Sbjct 184148 TTCAACGCTGGTACTCCAAAGCCTCAAATGTCCTCCTGTTTCTTAGTTGCAATGAAGGAT 184089
Query 93967 GACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCG 94026
|| ||||| || |||| ||| | | ||||| ||||| || || ||| ||
Sbjct 184088 GATTCCATTGAAGGTATTTACGATACTTTGAAGGAATGTGCTTTGATTTCTAAAACTGCT 184029
Query 94027 GGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACC 94086
|| || || || | | ||||| || | ||||| | || || ||||| |||||
Sbjct 184028 GGAGGTATTGGTCTACATATCCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACA 183969
Query 94087 AATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTAC 94146
|| || || || ||||| | | |||||| |||| ||||||||||| | || || ||
Sbjct 183968 AACGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAATACTGCCCGTTAT 183909
Query 94147 GTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCAC 94206
|| ||||| |||||| | ||| ||| | || || | ||| | ||||| ||||||
Sbjct 183908 GTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCAC 183849
Query 94207 GCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA---GG 94263
|| || | | ||||||||| | ||||||| ||||| || || || | |
Sbjct 183848 GCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGA---AGAAATCCGT 183792
Query 94264 GCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAA 94323
|| ||||| | ||| ||||| ||||| ||||| ||||| ||||| || ||||| ||
Sbjct 183791 GCGAGAGATTTATTCCCTGCTCTATGGGTTCCAGATCTTTTCATGAAGCGTGTCGAAGAA 183732
Query 94324 AACTCCGCCTGGAGTCTTTTTTGTC-CCAATGAATGTCCC-GGACTGTCCGACGTTTGTG 94381
||| | | |||| |||| || || || | || ||| || || ||| || |
Sbjct 183731 AACGGCACTTGGA--CTTTATTCTCTCCTACATCTGCCCCAGGCTTGAGTGACTGTTACG 183674
Query 94382 GATCGCGTTTTGAAGACTTGTATGCTCGTTACG-AATCGCAGGGCAAGGCCAGGAAGGTT 94440
| || |||| | | ||| | ||||||| || | ||| | | | ||| |
Sbjct 183673 GTGATGAATTCGAAGCCCTATATACCCGTTACGAAAAAGAAGGTCGTG----GTAAGACT 183618
Query 94441 ATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCC 94500
|| | || || | ||| | ||| |||| | ||| ||| || ||||| ||
Sbjct 183617 ATCAAGGCCCAAAAATTATGGTACTCTATCTTGGAAGCACAAACGGAAACTGGTACACC- 183559
Query 94501 TACATCTTGTT--CAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGA 94558
| | ||||| |||||| || ||| || |||||||| || || | || || |
Sbjct 183558 -ATTTGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTA 183500
Query 94559 TCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTG 94618
||||| || ||| ||||| || ||||| || || || |||| || |||| |||||
Sbjct 183499 TCAAGTCATCTAATTTGTGCTGTGAAATTGTTGAATACTCTGCTCCAGATGAGACTGCTG 183440
Query 94619 TGTGTAACCTGG 94630
| |||||| |||
Sbjct 183439 TTTGTAACTTGG 183428
>seq3582
Length=113103
Score = 109 bits (120), Expect = 5e-19
Identities = 472/737 (64%), Gaps = 17/737 (2%)
Strand=Plus/Plus
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955
|||| || || || || || || || || || || |||||||| |||||||||||
Sbjct 81495 CCCCCACACTATTTAATGCCGGTACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTG 81554
Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015
| | |||| ||||||||| || |||| ||||| | || || ||||| | || |
Sbjct 81555 CCATGAAGGACGACTCCATTGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTT 81614
Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075
| || || || || | || | | || || | | ||| ||| || || || |
Sbjct 81615 CCAAGACTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATA 81674
Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135
| |||||||| || || || ||||| | | || ||| |||| ||||||||||||
Sbjct 81675 TTGCAGGTACCAACGGTACTTCAAACGGGTTGATTCCCATGATCCGTGTCTTCAACAACA 81734
Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195
| || || ||||||||||| |||||| | ||| ||| | || || | | | |
Sbjct 81735 CTGCACGTTACGTGGACCAAGGTGGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGG 81794
Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255
|||| ||||| || ||| | | || |||| | |||||| || || || ||
Sbjct 81795 AGCCATGGCATGCAGACATCTTCGACTTTGTCGATATCAGAAAGACTCATGGTAAGGA-- 81852
Query 94256 TGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
|| | | || ||||| | ||| ||||| ||| | || || ||||| ||||| |
Sbjct 81853 -AGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCCGATCTTTTCATGAAGC 81911
Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTC-CCAATGAATGTCCC-GGACTGTC 94370
| ||||| | | ||||||| | || || || |||| || ||| || ||
Sbjct 81912 GTGTCGAAGAGGATGGGGCCTGGA--CCTTATTCTCACCAAGTGCTGCCCCAGGTTTGGA 81969
Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430
||||||||| || || ||||| | ||| | ||||||||| || | | | |
Sbjct 81970 CGACGTTTGGGGTGAAGAATTCGAAGAGCTATATACCCGTTACGAA----AGAGAAGGTC 82025
Query 94431 CAGG-AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489
|| || || | ||| ||| | ||| | ||| || | | ||| || |
Sbjct 82026 GTGGTAAAACCATCAAGGCTCAAAAGGTATGGTACGCCATCTTGCAAGCACAAACAGAAA 82085
Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548
| ||||| |||| ||| | | ||||| |||| ||| ||| ||||||| ||| ||
Sbjct 82086 CCGGTACACCCTTCATGGTTTATAAGGATGCCTGT-AACAGAAAGACCAACCAACAGAAC 82144
Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608
|| || ||||| || || |||| ||| || ||||||||| |||| || ||
Sbjct 82145 CTGGGTACCATCAAATCGTCAAACTTGTGTTGCGAAATCGTCGAGTATTCTTCCCCAGAT 82204
Query 94609 GAGATTGCTGTGTGTAA 94625
|| | |||||| |||||
Sbjct 82205 GAAACTGCTGTTTGTAA 82221
>seq2922
Length=128268
Score = 109 bits (120), Expect = 5e-19
Identities = 288/437 (66%), Gaps = 7/437 (2%)
Strand=Plus/Plus
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951
||| | || || ||||||| || || || || || || ||||| || |||||| ||
Sbjct 121893 GCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTG 121952
Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011
| | | |||| ||||| ||| || |||| ||||| | | ||||| |||||
Sbjct 121953 GTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTG 122012
Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071
|| || ||| || || || || || | | |||| || | ||| | | |||||
Sbjct 122013 ATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCT 122072
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
||||| ||||| || || || || ||||| | | |||||| | || || |||||
Sbjct 122073 TACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAAT 122132
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || || || || |||||||||||| | ||| ||| | || || | ||
Sbjct 122133 AACACTGCCCGTTATGTTGACCAGGGTGGTAACAAGAGACCTGGTGCGTTTGCCCTTTAC 122192
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|| || || ||||| || || | | ||| || || | | ||||||||||| ||
Sbjct 122193 CTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGGTAAA 122252
Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308
|| ||| | | || ||||| | ||| ||||| ||| | || || ||||| |||
Sbjct 122253 GA---GGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATG 122309
Query 94309 AAACGCGTCG-AGAAAA 94324
|| || |||| ||||||
Sbjct 122310 AAGCGTGTCGAAGAAAA 122326
>seq2369
Length=47450
Score = 87.8 bits (96), Expect = 2e-12
Identities = 209/316 (66%), Gaps = 0/316 (0%)
Strand=Plus/Plus
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955
|||| || | |||||||| || || || || || |||||||| |||||| | ||
Sbjct 27126 CCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATGTTTCTTAATTG 27185
Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015
| | |||| ||||| ||| || |||| || | | || || ||||| | || |
Sbjct 27186 CCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTT 27245
Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075
| ||| || || || | || | | || || || | ||| ||| ||||| || |
Sbjct 27246 CCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTCTTATA 27305
Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135
|| |||||||| || || || ||||| | | |||||| | || || ||||| ||
Sbjct 27306 TCGCTGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATA 27365
Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195
| || || || ||||||||||||||| | ||| ||| ||||||| | | | |
Sbjct 27366 CTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGG 27425
Query 94196 AGCCCTGGCACGCGGA 94211
|||| ||||| || ||
Sbjct 27426 AGCCATGGCATGCAGA 27441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494668044547240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |