Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq4535 123 2e-23 seq2811 122 8e-23 seq6788 116 3e-21 seq1626 114 1e-20 seq4845 107 2e-18 seq4029 105 6e-18 seq6248 102 7e-17 seq3221 84.2 2e-11 seq2922 82.4 7e-11 >seq4535 Length=12927 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || |||||||||||||| || || ||| | ||| || | Sbjct 8304 CTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCA 8245 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| || Sbjct 8244 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 8185 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || |||| || | ||||| ||||| || ||||| || |||| Sbjct 8184 TCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATA 8125 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || ||||||| ||| || || |||||||||||| Sbjct 8124 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 8089 >seq2811 Length=58406 Score = 122 bits (134), Expect = 8e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||||||| || || || || || ||||| || || |||||||| | ||| || Sbjct 26981 CTCAACACAAGGTGAAGAGTAGACTCCTTCTGAATGTTATAATCAGACAGCGTTCTACCG 27040 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||| ||| || || || | ||||||| ||| || || || ||||| ||||| || Sbjct 27041 TCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTG 27100 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||||||||| |||| || | || | ||||||||||| || || || || || | Sbjct 27101 TCTTGAATTTTCGACTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 27159 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||||||||| || ||||||||||| Sbjct 27160 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27195 Score = 122 bits (134), Expect = 8e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||||||| | || || || |||||||| || || || ||||| | ||| || Sbjct 27209 CTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCG 27268 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||| ||| || || || | ||||||| ||| || || || ||||| ||||| || Sbjct 27269 TCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTG 27328 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||||||||| ||||| || | || | ||||||||||| || || || || || | Sbjct 27329 TCTTGAATTTTACTTTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 27387 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || ||||||||||| || ||||||||||| Sbjct 27388 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27423 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||||||| | || || || |||||||||||||| || || || | |||| || Sbjct 27437 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCG 27496 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || | || || || || | ||||||| ||| || || || || || ||||| || Sbjct 27497 TCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTG 27556 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||||| |||| | | | || | || | |||||||||||| || || || | || | Sbjct 27557 TCTTGAA-TTTTCGACTTAACGTTGTCGATGGTGTCGGAAGATTCAACCTCTAATGTTAT 27615 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| | ||| || || ||||| ||||| Sbjct 27616 GGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 27651 >seq6788 Length=110522 Score = 116 bits (128), Expect = 3e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| |||| ||| | || ||||||||||||||||| || || | |||| || Sbjct 41387 CTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGACAAGGTTCTACCG 41328 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | || |||| ||| ||||| || ||||| ||||| || Sbjct 41327 TCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGAATACCTTCCTTG 41268 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| ||| |||| || | |||||| ||||| || ||||| | ||| | Sbjct 41267 TCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATG 41208 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAA 45332 || || || || | |||||| |||||| Sbjct 41207 GTCTTACCAGTCAAAGTTTTGACAAAA 41181 >seq1626 Length=97905 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| |||| ||| | || ||||||||||| || || || ||| | |||| || Sbjct 62576 CTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACCG 62635 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || || || |||||||| Sbjct 62636 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTG 62695 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || ||||| || | |||||| ||||| || ||||| ||||| | Sbjct 62696 TCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATG 62755 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331 ||||| || || | ||| || || || Sbjct 62756 GTTTTACCAGTCAAAGTCTTAACGAA 62781 >seq4845 Length=48244 Score = 107 bits (118), Expect = 2e-18 Identities = 159/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGAC--GGTTT 45180 || ||||| || | || || || || ||||||||||| ||||| | ||||| ||| Sbjct 16070 AGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGT--CTGACAAAGTTC 16127 Query 45181 TAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTT 45240 || ||| |||| ||| || || || | |||| || ||| ||||| || ||||| |||| Sbjct 16128 TACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGAATACCTT 16187 Query 45241 CTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGA 45299 | || |||||||| || |||| || | || | |||||| ||||||||||| || | Sbjct 16188 CCTTGTCTTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCAGAAGACTCGACCTCTAAG 16246 Query 45300 GTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || | || || || || || || || || || |||||||| Sbjct 16247 GTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 16287 Score = 107 bits (118), Expect = 2e-18 Identities = 159/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGAC--GGTTT 45180 || ||||| || | || || || || ||||||||||| ||||| | ||||| ||| Sbjct 16298 AGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGT--CTGACAAAGTTC 16355 Query 45181 TAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTT 45240 || ||| |||| ||| || || || | |||| || ||| ||||| || ||||| |||| Sbjct 16356 TACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGAATACCTT 16415 Query 45241 CTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGA 45299 | || |||||||| || |||| || | || | |||||| ||||||||||| || | Sbjct 16416 CCTTGTCTTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCAGAAGACTCGACCTCTAAG 16474 Query 45300 GTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || | || || || || || || || || || |||||||| Sbjct 16475 GTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 16515 Score = 107 bits (118), Expect = 2e-18 Identities = 159/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGAC--GGTTT 45180 || ||||| || | || || || || ||||||||||| ||||| | ||||| ||| Sbjct 16526 AGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGT--CTGACAAAGTTC 16583 Query 45181 TAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTT 45240 || ||| |||| ||| || || || | |||| || ||| ||||| || ||||| |||| Sbjct 16584 TACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGAATACCTT 16643 Query 45241 CTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGA 45299 | || |||||||| || |||| || | || | |||||| ||||||||||| || | Sbjct 16644 CCTTGTCTTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCAGAAGACTCGACCTCTAAG 16702 Query 45300 GTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || | || || || || || || || || || |||||||| Sbjct 16703 GTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 16743 >seq4029 Length=108955 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || | || || ||||||||||| || || || | ||| | Sbjct 14283 CTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCG 14224 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| || Sbjct 14223 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 14164 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || |||| || | ||||| ||||| || ||||| || |||| Sbjct 14163 TCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACTTCAAGGGTAATA 14104 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || ||||||| ||| || || |||||||||||| Sbjct 14103 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 14068 >seq6248 Length=918 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || ||||| ||||| || || ||| || ||| | ||| || Sbjct 339 ACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGACCATCCTCG 280 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||| || || ||| | ||||| || || ||||| || |||||||| || || || || Sbjct 279 AGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGG 220 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || || |||| || | |||||| ||||||||||| |||||||| | || ||| Sbjct 219 ATCTTGGTCTTGACATTGTCGATGGTGTCAGAAGACTCGACCTCGAGAGTGATGGTCTTG 160 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || || || || || ||||| Sbjct 159 CCGGTGAGGGTCTTGACGAAGATCTGCAT 131 >seq3221 Length=90415 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | ||| | || |||||||||||||| || || || | ||| || Sbjct 28361 CTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCG 28302 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || || || ||||| || Sbjct 28301 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 28242 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || || |||| || | |||||| ||||| || ||||| | ||| | Sbjct 28241 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATG 28182 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331 || || || || | ||| || || || Sbjct 28181 GTCTTACCAGTCAAAGTCTTAACGAA 28156 >seq2922 Length=128268 Score = 82.4 bits (90), Expect = 7e-11 Identities = 200/303 (66%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900 |||| |||||||| | ||||| || ||| ||||| || |||| | | | Sbjct 121719 TACAGTTATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAA 121778 Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960 |||||||||||| |||||| | | ||| | ||||| ||||| | ||||| || Sbjct 121779 GTCGCCGAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAAAGAT 121838 Query 122961 ATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGT 123020 ||||| || ||||| || | |||||||||| ||||| ||| || ||||| | Sbjct 121839 ATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCT 121898 Query 123021 CCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACC 123080 || || |||||| ||||| || ||||| |||| || ||||| ||| | || Sbjct 121899 CCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCC 121958 Query 123081 TTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCC 123140 || || ||| ||| || || || || || ||| || || || ||||||||| Sbjct 121959 ATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCC 122018 Query 123141 AAA 123143 ||| Sbjct 122019 AAA 122021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451952807293240