Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_013085.1
Length=194454
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 630 9e-176
seq7678 378 9e-100
seq7318 260 2e-64
seq7307 246 4e-60
>seq8857
Length=8770
Score = 630 bits (698), Expect = 9e-176
Identities = 733/986 (74%), Gaps = 2/986 (0%)
Strand=Plus/Plus
Query 7536 CAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAGAC 7595
|||| ||||| ||||||||||| ||||||||||| || ||||| |||||||| |||||
Sbjct 5446 CAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGT 5505
Query 7596 CAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGATGG 7655
||| ||||| | | || || ||||| || | ||||||||||||| ||||| | |
Sbjct 5506 TAGCGCGGTTAATGATATCAGCTCAGGTATTAATTACACGACCTTGACTATCAACTACAG 5565
Query 7656 ACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGTGA 7715
| || ||||| |||||||| || | ||||| ||||| || |||| ||| | |||||| |
Sbjct 5566 ATTGATTGAAATTGAAACCATTTAAATTGAAAGCCATAGTACTAATACCTAAAGCAGTAA 5625
Query 7716 ACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTTGA 7775
|||| || || | ||| ||||| || || | |||||| || | ||||| ||||||||||
Sbjct 5626 ACCAAATACCGATAACGGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTGA 5685
Query 7776 ACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTAGG 7835
| || ||||||||||||| || ||||| || || |||||||| || || || || |
Sbjct 5686 AACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAG 5745
Query 7836 TCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTCAC 7895
| ||||| ||||||||||| || ||||| | || || ||| || || ||||| |
Sbjct 5746 TTTCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCC 5805
Query 7896 GAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAAGA 7955
| || | ||| ||||| | ||||||||||| ||||| || || || |||||||| |
Sbjct 5806 TGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCACCAAATA 5865
Query 7956 CACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAAGA 8015
||||||| || || | |||||| || |||||||| ||||||||||| || || ||||| |
Sbjct 5866 CACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAATA 5925
Query 8016 CAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACCTT 8075
||| ||| ||||||| |||||||| ||||| ||||||||| | ||||| || ||||
Sbjct 5926 CAATCATAAAGTTGAAAGTACCAGAAATGCCTAGAGGCATACCATCAGAAAAGCTTCCTT 5985
Query 8076 GACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGCTA 8135
|||| | || || | | ||| ||||||| || || ||||| ||||| || || || |
Sbjct 5986 GACCAATTGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATACGCAA 6045
Query 8136 CACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTATG 8195
|| ||||| || |||||||| |||||| || |||||||||||||||||||||||
Sbjct 6046 CAGCAATCCAAGGGCGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATGTAAC 6105
Query 8196 CATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAGAGCC 8255
| | ||| | | |||||| | | || || | |||||||||| ||||| | ||
Sbjct 6106 AAGCTACACCTAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACC 6165
Query 8256 ACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGTTAGAAG 8315
| ||||||| ||| || |||||||| || ||||| ||||| | ||| ||||| |||||
Sbjct 6166 ATTCATCAACAGATGCCGCTTCCCATATTGGATAAAAGTGCAAACCGATAGCCGCAGAAG 6225
Query 8316 AAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCGACGGGTT 8375
||||| || ||||| ||||| || ||||| || || | | || |||| || ||||
Sbjct 6226 TAGGAATAATGGCACCGGAGATAATATTGTTTCCGTAAAGCAAAGATCCAGAAACAGGTT 6285
Query 8376 CACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA-ACAAATA 8434
|||| || || ||||| || || ||||||||||| | ||| || | ||| || ||| | |
Sbjct 6286 CACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATGATAAATACAGA-A 6344
Query 8435 GCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAGACGATTG 8494
| || | | | ||||| ||||||| ||||| ||||| || | || || || ||
Sbjct 6345 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGGCGGTTT 6404
Query 8495 TTGGTGGAGGTTACCCAGTTACAGAA 8520
| ||| ||||| ||||||||||||
Sbjct 6405 TCAGTGCTGGTTATCCAGTTACAGAA 6430
>seq7678
Length=557
Score = 378 bits (418), Expect = 9e-100
Identities = 341/429 (79%), Gaps = 0/429 (0%)
Strand=Plus/Plus
Query 7499 GCAGGTGCTTTGAGAGCAACAGGAGTGTTCTCAGCAGCAGCAAGGTCAAGAGGGAAGTTG 7558
|||||||| | | ||| ||||||| ||| ||||||| | ||| | |||||||||
Sbjct 124 GCAGGTGCAGTTAAAGCCACAGGAGCAACTTCACCAGCAGCCAAGTCTAAGGGGAAGTTG 183
Query 7559 TGAGCATTACGCTCGTGCATGACTTCCATGCCAAGACCAGCACGGTTGAGCACGTCTGCC 7618
||||| ||||||||||||||||||||||| || | ||| ||||||| ||||| |||
Sbjct 184 TGAGCGTTACGCTCGTGCATGACTTCCATACCCAAGTTAGCGCGGTTGATTACGTCAGCC 243
Query 7619 CAGGTGTTCAGGACACGACCTTGACCATCAATGATGGACTGGTTGAAGTTGAAACCGTTG 7678
|| || | ||| ||||||||| ||| || | || |||||||||||||| |||||
Sbjct 244 CAAGTAGCGATGACGCGACCTTGAGAATCGATTACTGATTGGTTGAAGTTGAATCCGTTC 303
Query 7679 AGGTTGAATGCCATGGTGCTAACACCAAGAGCAGTGAACCAGATGCCAACAACTGGCCAT 7738
|||||||| ||||| ||||| | ||| | ||| || |||||||| || | |||||||||
Sbjct 304 AGGTTGAACGCCATTGTGCTGATACCTAAAGCGGTAAACCAGATACCGATTACTGGCCAT 363
Query 7739 GCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAACGAAGCGTATTGGAAGATCAGA 7798
|| || | |||||||||||| |||||| ||||||||| |||||||||||||||||||
Sbjct 364 GCAGCCAAGAAGAAGTGCAGTGAACGGCTGTTGTTGAAGGAAGCGTATTGGAAGATCAAC 423
Query 7799 CGACCAAAGTATCCGTGAGCAGCAACGATGTTGTAGGTCTCTTCTTCTTGACCGAACTTA 7858
||||||||||| ||||| ||||| |||||||||||||| ||||||||||| ||||||||
Sbjct 424 CGACCAAAGTAACCGTGTGCAGCTACGATGTTGTAGGTTTCTTCTTCTTGTCCGAACTTG 483
Query 7859 TAACCATAGTTCTGGGACTCAGACTCAGTGGTTTCACGAACCAGAGAAGAGGTTACAAGC 7918
||||| ||||| || || || | || ||||||||||| |||| || || || || |
Sbjct 484 TAACCGTAGTTTTGTGATTCGGTTTCTGTGGTTTCACGTACCAAGGAGGAAGTAACCAAG 543
Query 7919 GAACCATGC 7927
||||| |||
Sbjct 544 GAACCGTGC 552
>seq7318
Length=447
Score = 260 bits (288), Expect = 2e-64
Identities = 264/341 (77%), Gaps = 2/341 (1%)
Strand=Plus/Minus
Query 6555 GAGACCAGAAA-CGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCA 6613
||||| ||||| || ||||| |||||||| ||||| || || || |||| || || | |
Sbjct 340 GAGAC-AGAAAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTA 282
Query 6614 AACGCCTTGAAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCA 6673
|| ||| ||| ||||||| |||||||||||||| |||||||| ||||| || |||
Sbjct 281 AAAGCCCGGAATGTATTTGCACCATCACCATCTTCAAATAAAGTATTTTCTACCGTCGCA 222
Query 6674 CCGTGAATAGCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAAC 6733
|| |||||||| || |||| || | || || | ||| || || ||||||||||||||
Sbjct 221 CCATGAATAGCGCATAGCAGGGCGGCGCCCAATACACCGGCAACTCCCATCATATGAAAT 162
Query 6734 GGGTTGAGCGTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCA 6793
||||| | ||||| || || || || || | || || | |||||| ||||| |||||
Sbjct 161 GGGTTCAAGGTCCAATTATGAAACCCTTGAAAAAATAGGATGAAGCGAAATATAGCTGCT 102
Query 6794 ACACCAAACGACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACA 6853
|||||||| |||||||| ||||||| | ||| || || ||||| || ||||| |||
Sbjct 101 ACACCAAAACTAGGCGCAAAAAACCAACCAGCCTGACCCAGTGGATAAATTAGAAATACA 42
Query 6854 GACACAAAGACAGCAATGGGACCAGAAAACGCGATTGCATT 6894
|| ||||| |||||||| ||||||||||| |||||||||||
Sbjct 41 GAAACAAAAACAGCAATTGGACCAGAAAATGCGATTGCATT 1
>seq7307
Length=548
Score = 246 bits (272), Expect = 4e-60
Identities = 346/481 (72%), Gaps = 10/481 (2%)
Strand=Plus/Minus
Query 6254 GTATATCACAGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGT 6313
|| ||| | |||||||| || | || | || || || || |||||||| | ||| ||
Sbjct 478 GTCTATTAGAGAGCGTTACCACGAGGTAGAACCTCCTCTGGGAATACAAATTGTTCGTGA 419
Query 6314 GGTTGATCCACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTA 6373
|| ||||| || |||||||| || || | ||| || |||| | ||||| ||||||
Sbjct 418 GGCTGATCTTGAGGAGCCATCCAAGCGCGGATACCCTCGTTCAGCAAAATGTTTTTGGTA 359
Query 6374 TAGAACGTCTCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAA 6433
||||| || || || ||||| || || ||||| | | ||||| || || ||||| |||
Sbjct 358 TAGAATGTTTCAAATTCTGGGTCTTCTGCTGCCCGCAATTCTTGGGATACGAAGTCGTAA 299
Query 6434 GCTCTAAGGTTAAGTGCAAGACCAATAATACCAATGCTAGAGG---TCCAAAGACCCATA 6490
|| | ||||| | ||| | ||| | || || | || || | |||| | || |
Sbjct 298 GCCCGGAGGTTCAATGCTAAACCCACGATTCCTA--CT-GACGCCATCCACAAGCCTGTG 242
Query 6491 ACAGGAACAAACAGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAG 6550
|| || ||||||||||| ||||| |||| ||| || || ||| |||||||||||| ||
Sbjct 241 ACTGGTACAAACAGCATGAAGAAGTGTAACCACCGTTTGTTGGAGAAGGCGATACCGAAT 182
Query 6551 ATCTGAGACCAGAAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTT--GTGTAG 6608
||||| |||||||| || || || || ||||| || ||||| || ||| ||| ||||||
Sbjct 181 ATCTGTGACCAGAATCGGTTCGCTGTCACCATGGAGTAGGTTTCTTCTGCTTGGGTGTAG 122
Query 6609 GCTCAAACGCCTTGAAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAG 6668
| || || ||| || || ||| |||||| |||||||| || || || ||||| |
Sbjct 121 --TTGAAGGCGCGGAAGGTTTTGGATGCTTCACCGTCTTCAAATAAGGTGTTTTCTACTG 64
Query 6669 TAGCACCGTGAATAGCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATAT 6728
| || |||||||| ||||| | | |||||||| | | ||| ||||| |||||||| |
Sbjct 63 TGGCTCCGTGAATGGCACACAATAGCGCTCCACCGAGTACACCCGCTACTCCCATCATGT 4
Query 6729 G 6729
|
Sbjct 3 G 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622055440861360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |