Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3690 104 4e-17 seq3379 96.9 6e-15 >seq3690 Length=234713 Score = 104 bits (114), Expect = 4e-17 Identities = 292/443 (66%), Gaps = 8/443 (2%) Strand=Plus/Plus Query 203880 TTCTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAG 203939 |||||| ||| ||||| ||||||||||| ||||||| ||| ||||| | ||||| | Sbjct 182531 TTCTCAAATAATACATACCGGTCTTTAGACCCTTCTTCCAGCCGTAGAAATGCATACTTG 182590 Query 203940 ACAGTTTGCTCA-CGTTGGGGTCGGCCATGTGAAT--GTTCAGAGACTGGCTTTGGTCGA 203996 || || | || ||||||| || | |||| |||| ||| || |||||||| Sbjct 182591 TTAGCTTACCCATAGTTGGGGCACGCAA---GAATAAATTCAAAGAGTGAGATTGGTCGA 182647 Query 203997 TGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCG 204056 || || || || || || ||||| || || || ||||| || ||||| ||||| || | Sbjct 182648 TGTAAATGGCACGGTCGGCTGCCATGTTAATGATTGTCTTTTGTGAAATTTCCCAAACAG 182707 Query 204057 TCTTGAACACGTCTCTGGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTG 204115 | || ||| ||| | | ||| ||||||| || | | || || || || || Sbjct 182708 TTTTATACAAATCTTTCAATTCTTGTGGCACAT-TTGGTAAACCTTGAATGGAACCATTT 182766 Query 204116 TCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGC 204175 | | || || | || | | || |||| || ||||| || || || ||| Sbjct 182767 TGTGTGATTAGATATTGCTTCATACCATCATCCCAAATACCCAAATCGACCAAATCACGC 182826 Query 204176 ACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTG 204235 | || || || |||| || ||||| || || || || || | || | ||| |||| Sbjct 182827 AACAAGTATGGATTGACGACTTGAAATTCACCAGATAGGACACGACGAGAATACATGTTG 182886 Query 204236 TTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGC 204295 || | ||||||||| |||||||| || || ||||||| ||| || || ||| Sbjct 182887 GAAGTAACTGGTTCGAAACACTCGTTGTAACCTAAGATCTGAGATGTGGATGCAGTAGGC 182946 Query 204296 ATGGGAGCCAGGAGCAGGGAGTT 204318 || || |||| | || ||||| Sbjct 182947 ATAGGTGCCATGGTCAAAGAGTT 182969 >seq3379 Length=20444 Score = 96.9 bits (106), Expect = 6e-15 Identities = 312/482 (65%), Gaps = 2/482 (0%) Strand=Plus/Plus Query 159923 CACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGG 159982 || ||||||||| ||||| || ||||| | |||| ||||||||||| | | | | Sbjct 701 CAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAAC 760 Query 159983 CCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAG 160042 || ||||| || || | | || | ||| || |||| || || | ||| || || Sbjct 761 CCGGGCATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAA 820 Query 160043 ATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGG 160102 | || || | || ||| || || || || || ||||| || |||| | ||| ||| Sbjct 821 ACACCTTCGATGGACGCGAAGGCGACTAGTCTTTCACCGAACAGCGCGTCTGCGTCTTGG 880 Query 160103 GTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTA 160162 |||| || ||||||||| ||||||| || || ||| |||| |||||| Sbjct 881 ATCCATCTAAGGGCCCATTCGGCCTTCTCGCAAATTTCTGGGATGGTGTCGATGGCGTTG 940 Query 160163 AACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATT 160222 ||||| || ||||| ||||||||| ||| | |||| | ||||| || Sbjct 941 AACAAGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAGGAGTAGGTT 1000 Query 160223 TCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATAC 160282 || | || | |||||||| || || || || ||||||| | || ||| | | Sbjct 1001 TCGGAATGAATGTTTTCGATAGCGATTTGGAAACCGTAGAAACTCTTGGCTTCCGGGATC 1060 Query 160283 TGCACCTCCTGTGTGAACCT-TTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGC 160341 || ||||| | ||| | | |||| || || | || || | ||||||| ||| || Sbjct 1061 TGGACCTCGGTGGAGAAATTCTCGACCAAG-TTTTCGTTGACAATACCGTCGGAGGCGGC 1119 Query 160342 AAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCA 160401 ||||| || | || |||||||| || |||| || ||| | ||| || | ||| Sbjct 1120 GAAGAAGGCAAGGACTCTTGAGATGAAGAACCTTTCGTTTTCGTTCATTCTGTTGTTCCA 1179 Query 160402 GT 160403 || Sbjct 1180 GT 1181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795066550134640