Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq4483 158 1e-33 seq6248 131 2e-25 seq3354 125 8e-24 seq8071 123 3e-23 seq7783 123 3e-23 seq5887 111 2e-19 seq3221 98.7 1e-15 seq2811 84.2 2e-11 >seq4483 Length=688 Score = 158 bits (174), Expect = 1e-33 Identities = 150/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| |||||||||||||| ||||| Sbjct 450 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCTGCGAA 509 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||||||||||| || | || |||||||||| |||||| |||||| | Sbjct 510 GATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATT 569 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| ||| ||||| || | ||||| || || ||||| || || || || Sbjct 570 GTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGAC 629 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 630 GAAGATCTGCAT 641 >seq6248 Length=918 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || || || | || ||||| |||||||||||||| Sbjct 322 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGACCATCCTCGAGTTGCTTGCCGGCGAA 263 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||| ||||| | || | || |||||||||| |||||| |||||| | Sbjct 262 GATCAAGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATT 203 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || || || || | |||||||| ||||| || || || || || Sbjct 202 GTCGATGGTGTCAGAAGACTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGAC 143 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 142 GAAGATCTGCAT 131 Score = 120 bits (132), Expect = 3e-22 Identities = 169/235 (72%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||| | ||| || | | ||||| ||||| ||||| || |||||| ||||| ||||| Sbjct 820 TTACTGGCCGCCACGCAGACGCAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTA 761 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 ||| || ||||| ||| | || || |||||||| || || || || | ||||| ||||| Sbjct 760 GTCAGAGAGAGTACGCCCATCCTCCAGCTGCTTTCCTGCAAAGATAAGACGCTGTTGGTC 701 Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCG 46538 | || | | |||||||||| ||||| |||| | ||| | | | ||||| | Sbjct 700 TGGTGGGATACCCTCCTTGTCCTGAATCTTGGTCTTCA-CGTTGTCGATAGTGTCTGAAG 642 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||| || | || || || |||||||||| || || || ||||||||||| Sbjct 641 ATTCCACCTCGAGTGTAATCGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 587 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||||||||| ||||| || | || || || ||||| || || || Sbjct 550 CTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCCTCAAGTTGCTTTCCAGCAAA 491 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||| ||||| | || | || |||||||||| ||||| |||||| ||| Sbjct 490 GATCAGACGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTGGTCTTGA-CGT 432 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| ||||| || || | |||||||| ||||| || || || || | Sbjct 431 TGTCGATAGTGTCGGAGGATTCAACCTCGAGTGTGATGGTCTTGCCAGTAAGTGTCTTGA 372 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 371 CGAAGATCTGCAT 359 >seq3354 Length=695 Score = 125 bits (138), Expect = 8e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||||||||| Sbjct 275 CTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAA 334 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | || |||||||||| ||||| ||||| | Sbjct 335 GATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATT 394 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | ||||| || ||||| || | || ||||| || |||||||| || || || Sbjct 395 GTTGATGGTGTCCGAGGACTCCACCTCGAGGGTAATGGTCTTACCCGTCAGAGTCTTGAC 454 Query 46582 AAAGATTTGCAT 46593 || || ||||| Sbjct 455 GAAAATCTGCAT 466 >seq8071 Length=459 Score = 123 bits (136), Expect = 3e-23 Identities = 147/197 (75%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| | || || |||||||||||||| || Sbjct 243 CTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAA 302 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | || | || |||||||||| |||||| ||||| ||| Sbjct 303 GATAAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 361 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || || || || | |||||||| ||||| |||| || || | Sbjct 362 TGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGA 421 Query 46581 CAAAGATTTGCATTTTG 46597 | || |||||||| ||| Sbjct 422 CGAAAATTTGCATGTTG 438 >seq7783 Length=540 Score = 123 bits (136), Expect = 3e-23 Identities = 164/225 (73%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | |||||| |||| || | || |||||| ||||| ||||||||||| Sbjct 224 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 165 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 |||||||| |||| ||||||||||| || || || || | |||||||| |||| || Sbjct 164 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGG 105 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCAC 46545 | || |||||||| |||||| ||||| ||| | | | ||||| || || || Sbjct 104 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCAGAGGACTCGAC 46 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTG 46590 || | |||||||| ||||| || || || ||||||||||| || Sbjct 45 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTG 1 >seq5887 Length=461 Score = 111 bits (122), Expect = 2e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 |||| |||||| |||||||| | || ||||| | || || || |||||||| ||||| Sbjct 227 TCCTATTGGATGTTGTAGTCCAAAAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCGAAG 168 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||||||| | ||||||| || | | ||||||||| |||||| ||||| | Sbjct 167 ATCAAGCGTTATTGGTCGGGTGGGATTCCTTCCTTGTCCTGGATCTTGGACTTGACATTG 108 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || || || ||||| || | |||||||| ||||||||||| || || || Sbjct 107 TCGATGGTATCAGAAGACTCCACCTCGAAGGTGATGGTCTTGCCCGTCAGGGTCTTCACG 48 Query 46583 AAGATTTGCATTTTGC 46598 || || |||||||||| Sbjct 47 AAAATCTGCATTTTGC 32 >seq3221 Length=90415 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||||||| | ||| |||| ||| || || ||||||||||| |||||||| ||| Sbjct 28373 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 28314 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| | |||| || | ||||| || || || ||||| | || ||||| | || Sbjct 28313 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 28254 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | |||||||| |||||| ||||| | | | ||||| ||||| || Sbjct 28253 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACT 28194 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAG 46585 |||| |||||||| || || |||| || ||||| ||| Sbjct 28193 TCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 28155 >seq2811 Length=58406 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | |||||||| || | ||| ||||||||||| |||||||| || Sbjct 27425 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 27484 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | || | |||| || |||||||| ||||| || ||||| | || || || | || Sbjct 27485 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 27544 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | | |||||||| || ||| ||| | ||| | | | |||||| ||||| || Sbjct 27545 ATACCTTCCTTGTCTTGAATTTTCGACTT-AACGTTGTCGATGGTGTCGGAAGATTCAAC 27603 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || |||||||| || |||| || || || || || ||||| Sbjct 27604 CTCTAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 27651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565175382983880