Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_015279.1
Length=190789
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 562 4e-155
seq7678 387 2e-102
seq7307 246 4e-60
seq7318 235 7e-57
>seq8857
Length=8770
Score = 562 bits (622), Expect = 4e-155
Identities = 724/994 (73%), Gaps = 4/994 (0%)
Strand=Plus/Minus
Query 179739 TGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 179798
|||| | |||||| | ||| ||||| || | |||||||| || | || |||||
Sbjct 6439 TGGGGTCGCTTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTT 6380
Query 179799 GGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCAT 179857
|| ||| ||||||| || || | ||| | |||||| |||| || ||| | ||||||||
Sbjct 6379 GGTGTTTTGATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATCATAGCCTTCAT 6321
Query 179858 CGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTA 179917
|||||||| || || || || ||||| || |||||||| || |||| || | | ||
Sbjct 6320 TGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTA 6261
Query 179918 TGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTT 179977
|| ||||| || ||||| ||||| || ||||| |||| || || ||| | |||||
Sbjct 6260 CGGAAACAATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTT 6201
Query 179978 CTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCA 180037
||||| || |||||||| ||||| |||| || ||| | || || |||||||||| |
Sbjct 6200 TTATCCAATATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGA 6141
Query 180038 ACTTGTCGTCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACT 180097
|| | || | |||||| | | || | | |||||||||||||||||||||||
Sbjct 6140 GCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACT 6081
Query 180098 TTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCTG 180156
|| || ||||||||||||| ||||| ||| || || ||||| ||||| || || |
Sbjct 6080 GAGTTTCCGTCTGGGTATGCGCCCTTGGAT-TGCTGTTGCGTATTCAGCTCCTGTTGCAG 6022
Query 180157 CAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATGC 180216
| || ||||||| ||| | | || || | |||||||| || ||||| | ||||
Sbjct 6021 CTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGC 5962
Query 180217 CCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATCC 180276
| || ||||||||||| || ||||||| ||| |||| ||||| || || ||||||||||
Sbjct 5961 CTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCC 5902
Query 180277 TGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCCG 180336
| |||||||| || |||||| | || ||||| ||||| || || || || || || |
Sbjct 5901 TTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTG 5842
Query 180337 CAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCCC 180396
| ||||| ||||| |||| || ||| || | | ||||| || |||| ||| ||
Sbjct 5841 CTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTG 5782
Query 180397 AGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACATG 180456
|| | |||||||| || |||||||| ||||| || || || || || ||||| ||||
Sbjct 5781 CTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATG 5722
Query 180457 GATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCACT 180516
| || || || || |||||||||| |||||| ||||||||||| ||||| | || |
Sbjct 5721 GTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATT 5662
Query 180517 TCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCA 180576
||||| | || || ||||| || | || || ||||| ||||| | || | || || |
Sbjct 5661 TCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTA 5602
Query 180577 TGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTG 180636
|||| ||||| | || |||||||| ||||| || || | ||||| ||||||||||||
Sbjct 5601 TGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTG 5542
Query 180637 TGCTCAACACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACG 180696
| | || || || || || | | ||||||||| || ||||||||||||||||| |
Sbjct 5541 TAATTAATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATG 5482
Query 180697 AGCGTAATGCTCACAACTTCCCACTTGACCTGGC 180730
| ||||||||||| |||||||| || ||||| ||
Sbjct 5481 AACGTAATGCTCATAACTTCCCTCTAGACCTAGC 5448
>seq7678
Length=557
Score = 387 bits (428), Expect = 2e-102
Identities = 342/427 (80%), Gaps = 0/427 (0%)
Strand=Plus/Minus
Query 180341 GCACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCCCAGAA 180400
||||||||| ||||||| || || |||| ||||||||||| ||||| || || || ||
Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493
Query 180401 CTACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACATGGATA 180460
||||||||||||||| || ||||||||||| |||||||||||||| |||||||| || ||
Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433
Query 180461 CTTCGGTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTT 180520
||| ||||| |||||||||| || || || ||||||||| ||||||||| ||||||||
Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373
Query 180521 CCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGC 180580
| |||| |||||||| || | || |||||||| || || | || | ||||| |||||
Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313
Query 180581 ATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTGCT 180640
|||||||| ||||| |||||||||||||| || | || ||| ||||||||| || |
Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253
Query 180641 CAACACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCG 180700
| |||||||| |||||| ||||||||||| ||||||||||||| |||||||||||
Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193
Query 180701 TAATGCTCACAACTTCCCACTTGACCTGGCAGCTGCTGAGTCCACTCCTGTTGCACTCAC 180760
||| |||||||||||||| | ||| |||| |||| ||| ||||||| || | ||
Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAAC 133
Query 180761 CGCTCCT 180767
|| |||
Sbjct 132 TGCACCT 126
>seq7307
Length=548
Score = 246 bits (272), Expect = 4e-60
Identities = 336/469 (72%), Gaps = 0/469 (0%)
Strand=Plus/Plus
Query 181968 TCCATATGATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAATTCACGGTG 182027
|||| |||||||| || || ||| | || ||||| || || | | ||| |||||||| |
Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60
Query 182028 TGACCGTGGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACTTTCAAAGCATTCG 182087
|| || || || || | | | |||||||||| | | || || ||| || |||
Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCA 120
Query 182088 ATTCAACTCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCTGGTCTCAGA 182147
| | || |||| |||||||||||| || ||||| ||||||||||| |||||||| ||||
Sbjct 121 ACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGA 180
Query 182148 TCTTCGGTATTGCGTTTAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTG 182207
| |||||||| || || ||| || ||||||| || ||||| ||||| ||||| || |
Sbjct 181 TATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAG 240
Query 182208 TTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTT 182267
| | || | |||| || | || || | ||| | || | ||||| || ||||
Sbjct 241 TCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTT 300
Query 182268 ATGACTTTGTATCCCAAGAAATCAGAGCATCAGAAGACCCAGAGTTCGAGACGTTCTACA 182327
| ||||| |||||||||||| | | ||| ||||||||||||| || || || ||||| |
Sbjct 301 ACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATA 360
Query 182328 CAAAGAACATTCTCTTGAATGAAGGTCTGCGTGCATGGTTAGCACCAGTCGATCAACCAC 182387
| || |||||| | |||| || ||| | || || ||| | || || ||||| || |
Sbjct 361 CCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTC 420
Query 182388 ATGAGAACTTTGTGTTCCCTGAGGAAGTATTACCCAGAGGTAACGCACT 182436
| || | ||||| ||||| ||||| || |||| | |||||||| ||
Sbjct 421 ACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCT 469
>seq7318
Length=447
Score = 235 bits (260), Expect = 7e-57
Identities = 256/340 (75%), Gaps = 0/340 (0%)
Strand=Plus/Plus
Query 181805 AATGCGATTGCTTTTTCCGGTCCTATTGCTGTATTCGTCTCTGTATTTCTCATCTATCCT 181864
||||| || || ||||| ||||| |||||||| || || ||||||||||| || |||||
Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60
Query 181865 CTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCGGTGTCGCGGCGATTTTCCGCTTC 181924
||||| || | ||||||| |||||||| ||||| ||||| || || || || ||||||
Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120
Query 181925 CTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGTGTT 181984
| || || | || || |||||||||||||| | || || || ||||||||||| |||
Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180
Query 181985 GCTGGTATCCTGGGTGGCGCATTACTCTCTGCAATTCACGGTGTGACCGTGGAGAATACT 182044
|| ||| | |||| | ||| | || | || ||||| |||| ||| || || ||||||
Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240
Query 182045 CTGTATCAAGACGGTGACCAAGCAAATACTTTCAAAGCATTCGATTCAACTCAAGAAGAA 182104
| | | |||| ||||| |||||||| ||| || || | ||||||||| |||
Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300
Query 182105 GAAACCTATTCAATGGTTACAGCGAACCGCTTCTGGTCTC 182144
||||| ||||||||||| || || |||||||| |||||
Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCTGTCTC 340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 610328748386760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |