Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq8857 497 1e-135 seq7678 288 1e-72 seq7307 244 1e-59 seq2177 125 8e-24 seq4590 116 4e-21 seq7318 105 8e-18 >seq8857 Length=8770 Score = 497 bits (550), Expect = 1e-135 Identities = 678/944 (72%), Gaps = 2/944 (0%) Strand=Plus/Minus Query 169442 TTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGT-TTCATC 169500 |||| |||||||||||| | ||||| || |||| | || ||| | | ||| || ||| Sbjct 6390 TTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATC 6332 Query 169501 GTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGT 169560 | || |||||||| || ||||| || ||||| || || || | ||||| || | || Sbjct 6331 ATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGA 6272 Query 169561 TCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATC 169620 ||||| | || || ||||| || ||||| ||||| || |||| | || |||||| Sbjct 6271 TCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATC 6212 Query 169621 GGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGT 169680 || | ||||| || ||||| |||||||| ||| |||||||||||||||| || |||||| Sbjct 6211 GGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGT 6152 Query 169681 GGTCCTTATCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGA 169740 ||||||||| || | | | | |||||| | | ||| | | |||||||| | Sbjct 6151 GGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGT 6092 Query 169741 CAGTGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTTGCATACTCTGCA 169800 |||||||||| | | | | || ||||| |||||||| |||||| || || || Sbjct 6091 GAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCT 6032 Query 169801 CCAGTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCT 169860 || || | ||||| ||||| ||||| | |||||| ||||||| || || ||| Sbjct 6031 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCT 5972 Query 169861 GATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAG 169920 ||||||||||| ||||| || || |||||||||||||||||| | || ||||| || || Sbjct 5971 GATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAA 5912 Query 169921 CATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATCT 169980 || ||||| || ||||| || || |||||| ||| ||||| || | || || || || Sbjct 5911 CACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCC 5852 Query 169981 TTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACAGAG 170040 |||| || ||||||||||| | || ||||| | | ||||| ||||| ||||| Sbjct 5851 CTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAA 5792 Query 170041 CAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTA 170100 | || || || | ||||| || ||||| ||||| |||||||| || || || ||| Sbjct 5791 AATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTA 5732 Query 170101 GCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGA 170160 || || || ||||| ||||| || | |||||||| ||||| ||||||||||| | Sbjct 5731 GCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGT 5672 Query 170161 AGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGT 170220 | |||| |||||| |||| | || || ||| | || | ||||| || || | ||| Sbjct 5671 TCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGT 5612 Query 170221 ATCTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCT 170280 || | || ||||| ||||| || ||||||||||| || || ||||| || |||||| | Sbjct 5611 ATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGT 5552 Query 170281 AACGGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAA 170340 | || | | || || | |||| | | ||| | || ||| | ||||||||| Sbjct 5551 CAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAA 5492 Query 170341 GTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGC 170384 |||||||||||| | ||||| || |||||||| ||||||||||| Sbjct 5491 GTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 5448 >seq7678 Length=557 Score = 288 bits (318), Expect = 1e-72 Identities = 326/436 (75%), Gaps = 6/436 (1%) Strand=Plus/Minus Query 169995 GCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACAGAGCAAGAGTCACAGAA 170054 ||| ||||| | |||||||| || | | | ||||| ||||| || ||||| || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 170055 CTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTA 170114 ||| ||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||| Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 170115 CTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGT---CTACACTT 170171 ||||||||| | |||||||| || ||||| ||||||||| || || || ||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAAC---AGCCGTTCACTGCACTT 376 Query 170172 CTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGCACAAT 170231 |||| | || | | || || | || | ||||| ||| || | |||||| ||||||| Sbjct 375 CTTCTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAAT 316 Query 170232 GGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCTAACGGAAAAAT 170291 ||| |||||| |||| || |||||||| ||||||||||| | ||| || | || | Sbjct 315 GGCGTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGT 256 Query 170292 CGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAAGTTATGCATGA 170351 | || | || |||| ||| || | ||| | || ||||||||||||||||| ||||| || Sbjct 255 CATCGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGA 196 Query 170352 AAGAAATGCACACAACTTCCCACTAGACCTAGCATCTGCTGAGTCTACACAGGTTGCTTT 170411 | || || ||||||||||| ||||| | || ||| ||| | | | || ||||| Sbjct 195 GCGTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTT 136 Query 170412 AACAGCACCTACAATC 170427 ||| |||||| ||||| Sbjct 135 AACTGCACCTGCAATC 120 >seq7307 Length=548 Score = 244 bits (270), Expect = 1e-59 Identities = 353/496 (71%), Gaps = 29/496 (6%) Strand=Plus/Plus Query 171075 CACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTATTATGTGCCATTCATGGTGCA 171134 ||||||||||| || || || |||| |||||||| |||| ||||||||||| || || Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62 Query 171135 ACAGTGCAGAACACATTGTATGAAGACACATCAGTTTATACTGATAATAAAATTCAAAGC 171194 ||||| | ||||| || | ||||||| ||| | || |||| Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGG------------TGA----AGCATCCAAA-- 104 Query 171195 ACAACATTCCGTGCCTTTGATCCTACAC--AGGAAGAAGAAACTTACAGTATGATTACAG 171252 || ||||| ||||| | |||||| | | ||||||||| ||| ||| | |||| Sbjct 105 ---ACCTTCCGCGCCTTCAA--CTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAG 159 Query 171253 CAAACAGATTCTGGTCACAGATATTTGGTATTGCTTTCTCTAACAAAAGATTTTTACACT 171312 | ||| ||||||||||||||||||| ||||| || ||||| |||||| | | ||||||| Sbjct 160 CGAACCGATTCTGGTCACAGATATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACT 219 Query 171313 TCCTTATGTTGTTCGTTCCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTAGGTC 171372 || | ||| |||| || || |||| || |||||| | || |||| ||||| ||| Sbjct 220 TCTTCATGCTGTTTGTACCAGTCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTT 279 Query 171373 TAGCACTTAACCTCAGAGCATACGATTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACC 171432 ||||| | |||||| | || ||||| || ||||| ||||| | | ||||||||||||| Sbjct 280 TAGCATTGAACCTCCGGGCTTACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACC 339 Query 171433 CAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCATGGA 171492 |||| || || || ||||| || || || || | || || || ||||| | || |||| Sbjct 340 CAGAATTTGAAACATTCTATACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGA 399 Query 171493 TG--TCATCAGTTGACCAACCACATGAGAACTTCGTATTCCCAGAAGAAGTGTTACCAAG 171550 || || ||| || || || || || | || ||||||||||| || || |||| | Sbjct 400 TGGCTCCTCA--AGATCAGCCTCACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCG 457 Query 171551 AGGTAACGCACTTTAA 171566 |||||||| || ||| Sbjct 458 TGGTAACGCTCTCTAA 473 >seq2177 Length=136605 Score = 125 bits (138), Expect = 8e-24 Identities = 323/488 (66%), Gaps = 12/488 (2%) Strand=Plus/Plus Query 154602 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 154661 || ||||| || ||| ||| || |||||||| || |||| | || ||||| ||| | Sbjct 6447 ATTACAGGTTTCGATGGTATTTCTTTACAACCAAATTCAGGTGCTCAAGGTGAATATACT 6506 Query 154662 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 154721 || ||| || |||| | | |||| || | ||| || || | | || || ||| Sbjct 6507 GGTCTGAGAGTAATCAGATCCTACCTGGAAAGCAAAGGTGAAAATCATCGTAACGTGTGT 6566 Query 154722 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAA 154781 || || || | || || ||||| || ||||| ||| ||| | ||||| || | ||| Sbjct 6567 TTAATCCCTGTATCCGCTCATGGTACAAATCCGGCTTCTGCCGCTATGGCGGGTTTAAAA 6626 Query 154782 GTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAA 154841 ||||| |||||| ||| | ||||| |||| | || || |||| || Sbjct 6627 GTTGTTCCTGTCAACTGTTTGCAGGATGGCTCATTAGATCTGGTTGACTTAAAGAATAAG 6686 Query 154842 GCAATCATGAATA-CATTT----GAACTGTCATGTATTATGATTACATACCCATCTACAC 154896 || |||| | |||| ||||| | | ||||| || || || ||||| Sbjct 6687 GC-----TGAACAACATTCTAAAGAACTAGCCGCCGTAATGATCACCTATCCTTCTACTT 6741 Query 154897 ATGGTGTATTTGAAACTAACATTAGACA-GATATGTAAGATCGTTCATGACAATGGTGGT 154955 | ||| |||||||| | ||| ||| | ||| | | ||||| ||| |||||| Sbjct 6742 ACGGTTTATTTGAACCAGGCATCCAACATGCTAT-TGATATCGTACATTCTTTTGGTGGA 6800 Query 154956 CAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAG 155015 || || ||| | ||||| || ||| | ||||| ||||| || ||| | ||| | || Sbjct 6801 CAAGTCTATTTGGATGGTGCTAATATGAATGCGCAGGTTGGGCTAACTTCACCCGGAGAT 6860 Query 155016 TATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGT 155075 |||||||||||| || || | || |||||||| ||||||| ||||| ||||| ||| Sbjct 6861 CTTGGTGCAGATGTTTGCCACTTGAATTTACATAAGACATTCTCCATTCCTCATGGTGGT 6920 Query 155076 GGAGGTCC 155083 || ||||| Sbjct 6921 GGTGGTCC 6928 >seq4590 Length=221010 Score = 116 bits (128), Expect = 4e-21 Identities = 182/258 (71%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 153205 TTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTG 153264 |||| ||| | |||||||| || || ||| || ||||| || || ||||| | | | Sbjct 47153 TTATTGGTAAGGGATACTACGGCACGATTTTGCCGCCAGTTATTCAAAGAAACCTATTGG 47212 Query 153265 AGAATCCTAGT-TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 153323 | || || || |||||||| ||||| ||||| || || |||| ||||||||||| ||| Sbjct 47213 A-AAGCCCAGAATGGTACACTTCTTATACTCCATACCAGCCTGAAATATCTCAGGGTAGA 47271 Query 153324 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCA 153383 |||||||| ||| | || | |||||| | | | || | || || || || | ||| Sbjct 47272 TTGGAAGCATTACTAAACTTCCAAACAGTAGTTTCCGATTTGACTGGTTTGCCTGTGGCA 47331 Query 153384 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTATTAGCATATAAT 153443 ||||| || | || ||||||| || || || | ||||| |||||| | ||| |||| Sbjct 47332 AACGCCTCATTGTTGGATGAAGGTACCGCGGCTGGTGAAGCTATGCTACTGTCATTTAAT 47391 Query 153444 TCTACAAGAGATAAGAAG 153461 | | ||| | || ||| Sbjct 47392 ATTTCCAGAAAGAAAAAG 47409 Score = 105 bits (116), Expect = 8e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827 |||||||| ||| |||| ||||| ||||| |||||||||||||| || || || | Sbjct 47737 CAAAGGTTCGGTGTTCCAATGGGTTATGGTGGTCCTCATGCTGCCTTTTTCGCCGTTATT 47796 Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGT 153887 || || || ||||| || |||||||||||||| ||| || || | |||| Sbjct 47797 GATAAACTGAACAGAAAAATTCCTGGCAGAATTGTTGGTATCTCCAAGGACCGCCTAGGT 47856 Query 153888 AATAAAG-CATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGC 153946 ||| | | ||| | ||||| |||| |||||||| ||||| || | | || ||||| Sbjct 47857 AATCCTGCCCTAC-GTTTAGCTTTACAAACTAGAGAACAGCACATTAAACGTGATAAAGC 47915 Query 153947 AACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986 ||| ||||| ||||| ||||| || || |||||||| Sbjct 47916 AACTTCAAACATTTGCACCGCTCAAGCCCTTTTGGCTAAT 47955 >seq7318 Length=447 Score = 105 bits (116), Expect = 8e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 170955 TTTCTGATCTATCCACTAGGTCAGCACAGTTGGTTCTTCGCACCATCATTCGGTGTCGCA 171014 ||||| || |||||||| |||||| ||||||| || || || || ||||| ||| Sbjct 46 TTTCTAATTTATCCACTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCA 105 Query 171015 GCAATTTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAATCCATTT 171074 || || ||||| | ||| |||| | ||||| || || || || ||||| |||||| Sbjct 106 GCTATATTTCGCTTCATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTT 165 Query 171075 CACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTATTATGTGCCATTCATGGTGCA 171134 || |||||||| ||||| || || | || | || | |||| || ||||||||||| Sbjct 166 CATATGATGGGAGTTGCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCG 225 Query 171135 ACAGTGCAGAACACATTGTATGAAGA 171160 || || | || || || | |||||| Sbjct 226 ACGGTAGAAAATACTTTATTTGAAGA 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579148225012960