Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 497 1e-135
seq7678 288 1e-72
seq7307 244 1e-59
seq2177 125 8e-24
seq4590 116 4e-21
seq7318 105 8e-18
>seq8857
Length=8770
Score = 497 bits (550), Expect = 1e-135
Identities = 678/944 (72%), Gaps = 2/944 (0%)
Strand=Plus/Minus
Query 169442 TTGGTTGGTTTGGTGTTCTAATGATTCCATGCTTACTCACAGCAGCAGCATGT-TTCATC 169500
|||| |||||||||||| | ||||| || |||| | || ||| | | ||| || |||
Sbjct 6390 TTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATC 6332
Query 169501 GTTGCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGT 169560
| || |||||||| || ||||| || ||||| || || || | ||||| || | ||
Sbjct 6331 ATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGA 6272
Query 169561 TCTTTCTTGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATC 169620
||||| | || || ||||| || ||||| ||||| || |||| | || ||||||
Sbjct 6271 TCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATC 6212
Query 169621 GGACTACACTTCTACCCAATCTGGGAAGCAGCAACTGTTGATGAATGGTTGTATAATGGT 169680
|| | ||||| || ||||| |||||||| ||| |||||||||||||||| || ||||||
Sbjct 6211 GGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGT 6152
Query 169681 GGTCCTTATCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGA 169740
||||||||| || | | | | |||||| | | ||| | | |||||||| |
Sbjct 6151 GGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGT 6092
Query 169741 CAGTGGGAACTATCATACAGATTAGGAATGCGTCCTTGGATCTGTGTTGCATACTCTGCA 169800
|||||||||| | | | | || ||||| |||||||| |||||| || || ||
Sbjct 6091 GAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCT 6032
Query 169801 CCAGTATCTGCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCT 169860
|| || | ||||| ||||| ||||| | |||||| ||||||| || || |||
Sbjct 6031 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCT 5972
Query 169861 GATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAG 169920
||||||||||| ||||| || || |||||||||||||||||| | || ||||| || ||
Sbjct 5971 GATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAA 5912
Query 169921 CATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATCT 169980
|| ||||| || ||||| || || |||||| ||| ||||| || | || || || ||
Sbjct 5911 CACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCC 5852
Query 169981 TTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACAGAG 170040
|||| || ||||||||||| | || ||||| | | ||||| ||||| |||||
Sbjct 5851 CTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAA 5792
Query 170041 CAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTA 170100
| || || || | ||||| || ||||| ||||| |||||||| || || || |||
Sbjct 5791 AATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTA 5732
Query 170101 GCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGA 170160
|| || || ||||| ||||| || | |||||||| ||||| ||||||||||| |
Sbjct 5731 GCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGT 5672
Query 170161 AGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGT 170220
| |||| |||||| |||| | || || ||| | || | ||||| || || | |||
Sbjct 5671 TCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGT 5612
Query 170221 ATCTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCT 170280
|| | || ||||| ||||| || ||||||||||| || || ||||| || |||||| |
Sbjct 5611 ATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGT 5552
Query 170281 AACGGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAA 170340
| || | | || || | |||| | | ||| | || ||| | |||||||||
Sbjct 5551 CAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAA 5492
Query 170341 GTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGC 170384
|||||||||||| | ||||| || |||||||| |||||||||||
Sbjct 5491 GTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 5448
>seq7678
Length=557
Score = 288 bits (318), Expect = 1e-72
Identities = 326/436 (75%), Gaps = 6/436 (1%)
Strand=Plus/Minus
Query 169995 GCATGGTTCACTTGTTACTTCATCTCTAATCAGAGAAACAACAGAGCAAGAGTCACAGAA 170054
||| ||||| | |||||||| || | | | ||||| ||||| || ||||| ||
Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493
Query 170055 CTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTA 170114
||| ||||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433
Query 170115 CTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGT---CTACACTT 170171
||||||||| | |||||||| || ||||| ||||||||| || || || |||||
Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAAC---AGCCGTTCACTGCACTT 376
Query 170172 CTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGCACAAT 170231
|||| | || | | || || | || | ||||| ||| || | |||||| |||||||
Sbjct 375 CTTCTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAAT 316
Query 170232 GGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTGATGCTAACGGAAAAAT 170291
||| |||||| |||| || |||||||| ||||||||||| | ||| || | || |
Sbjct 315 GGCGTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGT 256
Query 170292 CGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTATGGAAGTTATGCATGA 170351
| || | || |||| ||| || | ||| | || ||||||||||||||||| ||||| ||
Sbjct 255 CATCGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGA 196
Query 170352 AAGAAATGCACACAACTTCCCACTAGACCTAGCATCTGCTGAGTCTACACAGGTTGCTTT 170411
| || || ||||||||||| ||||| | || ||| ||| | | | || |||||
Sbjct 195 GCGTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTT 136
Query 170412 AACAGCACCTACAATC 170427
||| |||||| |||||
Sbjct 135 AACTGCACCTGCAATC 120
>seq7307
Length=548
Score = 244 bits (270), Expect = 1e-59
Identities = 353/496 (71%), Gaps = 29/496 (6%)
Strand=Plus/Plus
Query 171075 CACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTATTATGTGCCATTCATGGTGCA 171134
||||||||||| || || || |||| |||||||| |||| ||||||||||| || ||
Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62
Query 171135 ACAGTGCAGAACACATTGTATGAAGACACATCAGTTTATACTGATAATAAAATTCAAAGC 171194
||||| | ||||| || | ||||||| ||| | || ||||
Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGG------------TGA----AGCATCCAAA-- 104
Query 171195 ACAACATTCCGTGCCTTTGATCCTACAC--AGGAAGAAGAAACTTACAGTATGATTACAG 171252
|| ||||| ||||| | |||||| | | ||||||||| ||| ||| | ||||
Sbjct 105 ---ACCTTCCGCGCCTTCAA--CTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAG 159
Query 171253 CAAACAGATTCTGGTCACAGATATTTGGTATTGCTTTCTCTAACAAAAGATTTTTACACT 171312
| ||| ||||||||||||||||||| ||||| || ||||| |||||| | | |||||||
Sbjct 160 CGAACCGATTCTGGTCACAGATATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACT 219
Query 171313 TCCTTATGTTGTTCGTTCCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTAGGTC 171372
|| | ||| |||| || || |||| || |||||| | || |||| ||||| |||
Sbjct 220 TCTTCATGCTGTTTGTACCAGTCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTT 279
Query 171373 TAGCACTTAACCTCAGAGCATACGATTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACC 171432
||||| | |||||| | || ||||| || ||||| ||||| | | |||||||||||||
Sbjct 280 TAGCATTGAACCTCCGGGCTTACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACC 339
Query 171433 CAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCATGGA 171492
|||| || || || ||||| || || || || | || || || ||||| | || ||||
Sbjct 340 CAGAATTTGAAACATTCTATACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGA 399
Query 171493 TG--TCATCAGTTGACCAACCACATGAGAACTTCGTATTCCCAGAAGAAGTGTTACCAAG 171550
|| || ||| || || || || || | || ||||||||||| || || |||| |
Sbjct 400 TGGCTCCTCA--AGATCAGCCTCACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCG 457
Query 171551 AGGTAACGCACTTTAA 171566
|||||||| || |||
Sbjct 458 TGGTAACGCTCTCTAA 473
>seq2177
Length=136605
Score = 125 bits (138), Expect = 8e-24
Identities = 323/488 (66%), Gaps = 12/488 (2%)
Strand=Plus/Plus
Query 154602 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 154661
|| ||||| || ||| ||| || |||||||| || |||| | || ||||| ||| |
Sbjct 6447 ATTACAGGTTTCGATGGTATTTCTTTACAACCAAATTCAGGTGCTCAAGGTGAATATACT 6506
Query 154662 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 154721
|| ||| || |||| | | |||| || | ||| || || | | || || |||
Sbjct 6507 GGTCTGAGAGTAATCAGATCCTACCTGGAAAGCAAAGGTGAAAATCATCGTAACGTGTGT 6566
Query 154722 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAA 154781
|| || || | || || ||||| || ||||| ||| ||| | ||||| || | |||
Sbjct 6567 TTAATCCCTGTATCCGCTCATGGTACAAATCCGGCTTCTGCCGCTATGGCGGGTTTAAAA 6626
Query 154782 GTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAA 154841
||||| |||||| ||| | ||||| |||| | || || |||| ||
Sbjct 6627 GTTGTTCCTGTCAACTGTTTGCAGGATGGCTCATTAGATCTGGTTGACTTAAAGAATAAG 6686
Query 154842 GCAATCATGAATA-CATTT----GAACTGTCATGTATTATGATTACATACCCATCTACAC 154896
|| |||| | |||| ||||| | | ||||| || || || |||||
Sbjct 6687 GC-----TGAACAACATTCTAAAGAACTAGCCGCCGTAATGATCACCTATCCTTCTACTT 6741
Query 154897 ATGGTGTATTTGAAACTAACATTAGACA-GATATGTAAGATCGTTCATGACAATGGTGGT 154955
| ||| |||||||| | ||| ||| | ||| | | ||||| ||| ||||||
Sbjct 6742 ACGGTTTATTTGAACCAGGCATCCAACATGCTAT-TGATATCGTACATTCTTTTGGTGGA 6800
Query 154956 CAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAG 155015
|| || ||| | ||||| || ||| | ||||| ||||| || ||| | ||| | ||
Sbjct 6801 CAAGTCTATTTGGATGGTGCTAATATGAATGCGCAGGTTGGGCTAACTTCACCCGGAGAT 6860
Query 155016 TATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGT 155075
|||||||||||| || || | || |||||||| ||||||| ||||| ||||| |||
Sbjct 6861 CTTGGTGCAGATGTTTGCCACTTGAATTTACATAAGACATTCTCCATTCCTCATGGTGGT 6920
Query 155076 GGAGGTCC 155083
|| |||||
Sbjct 6921 GGTGGTCC 6928
>seq4590
Length=221010
Score = 116 bits (128), Expect = 4e-21
Identities = 182/258 (71%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 153205 TTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTG 153264
|||| ||| | |||||||| || || ||| || ||||| || || ||||| | | |
Sbjct 47153 TTATTGGTAAGGGATACTACGGCACGATTTTGCCGCCAGTTATTCAAAGAAACCTATTGG 47212
Query 153265 AGAATCCTAGT-TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 153323
| || || || |||||||| ||||| ||||| || || |||| ||||||||||| |||
Sbjct 47213 A-AAGCCCAGAATGGTACACTTCTTATACTCCATACCAGCCTGAAATATCTCAGGGTAGA 47271
Query 153324 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCA 153383
|||||||| ||| | || | |||||| | | | || | || || || || | |||
Sbjct 47272 TTGGAAGCATTACTAAACTTCCAAACAGTAGTTTCCGATTTGACTGGTTTGCCTGTGGCA 47331
Query 153384 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTATTAGCATATAAT 153443
||||| || | || ||||||| || || || | ||||| |||||| | ||| ||||
Sbjct 47332 AACGCCTCATTGTTGGATGAAGGTACCGCGGCTGGTGAAGCTATGCTACTGTCATTTAAT 47391
Query 153444 TCTACAAGAGATAAGAAG 153461
| | ||| | || |||
Sbjct 47392 ATTTCCAGAAAGAAAAAG 47409
Score = 105 bits (116), Expect = 8e-18
Identities = 157/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827
|||||||| ||| |||| ||||| ||||| |||||||||||||| || || || |
Sbjct 47737 CAAAGGTTCGGTGTTCCAATGGGTTATGGTGGTCCTCATGCTGCCTTTTTCGCCGTTATT 47796
Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGT 153887
|| || || ||||| || |||||||||||||| ||| || || | ||||
Sbjct 47797 GATAAACTGAACAGAAAAATTCCTGGCAGAATTGTTGGTATCTCCAAGGACCGCCTAGGT 47856
Query 153888 AATAAAG-CATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGC 153946
||| | | ||| | ||||| |||| |||||||| ||||| || | | || |||||
Sbjct 47857 AATCCTGCCCTAC-GTTTAGCTTTACAAACTAGAGAACAGCACATTAAACGTGATAAAGC 47915
Query 153947 AACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986
||| ||||| ||||| ||||| || || ||||||||
Sbjct 47916 AACTTCAAACATTTGCACCGCTCAAGCCCTTTTGGCTAAT 47955
>seq7318
Length=447
Score = 105 bits (116), Expect = 8e-18
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 170955 TTTCTGATCTATCCACTAGGTCAGCACAGTTGGTTCTTCGCACCATCATTCGGTGTCGCA 171014
||||| || |||||||| |||||| ||||||| || || || || ||||| |||
Sbjct 46 TTTCTAATTTATCCACTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCA 105
Query 171015 GCAATTTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAATCCATTT 171074
|| || ||||| | ||| |||| | ||||| || || || || ||||| ||||||
Sbjct 106 GCTATATTTCGCTTCATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTT 165
Query 171075 CACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTATTATGTGCCATTCATGGTGCA 171134
|| |||||||| ||||| || || | || | || | |||| || |||||||||||
Sbjct 166 CATATGATGGGAGTTGCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCG 225
Query 171135 ACAGTGCAGAACACATTGTATGAAGA 171160
|| || | || || || | ||||||
Sbjct 226 ACGGTAGAAAATACTTTATTTGAAGA 251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579148225012960
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