Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_015281.1
Length=179563
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 549 2e-151
seq7678 365 5e-96
seq7307 228 9e-55
seq7318 197 2e-45
>seq8857
Length=8770
Score = 549 bits (608), Expect = 2e-151
Identities = 715/986 (73%), Gaps = 2/986 (0%)
Strand=Plus/Minus
Query 167863 TTCTGCGAGTGGGTAACATCAACTAACAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 167922
||||| | ||| |||| ||| | |||||||| || | || ||||| || || ||
Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371
Query 167923 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 167981
||||| || || | ||| | |||||| ||||| || ||| | |||||| | ||||||||
Sbjct 6370 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATCATAGCCTTCATTGCTGCTCC 6312
Query 167982 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 168041
|| || || || || || || |||||||| || |||| || | | || || |||||
Sbjct 6311 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAA 6252
Query 168042 CATCATCTCTGGTGCAGTTGTCCCTTCTTCTAATGCTATTGGACTTCACTTCTATCCCAT 168101
|| ||||| ||||| || | ||| ||||| ||||| || | ||||| ||||| ||
Sbjct 6251 TATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAAT 6192
Query 168102 CTGGGAAGCAGCATCACTCGATGAGTGGTTGTATAACGGTGGTCCTTTCCAACTAGTAGT 168161
|||||||| ||||| | ||||| ||||| || || |||||||||| | ||| | ||
Sbjct 6191 ATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 6132
Query 168162 CTTTCACTTCCTCATCGGTATCTATGCATACATGGGACGTGAATGGGAACTTTCATATCG 168221
| |||||| | | ||| | | |||||||| ||||| |||||||| | ||
Sbjct 6131 TCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCG 6072
Query 168222 TTTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCAGCGAGTGC 168281
| | |||||||| || ||||| |||||| || || || || || || || || | |||
Sbjct 6071 TCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGC 6012
Query 168282 AGTATTCCTAGTGTATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAAT 168341
|| ||| | | || || | |||||||| || || ||||||| ||||| || || ||
Sbjct 6011 TGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCAT 5952
Query 168342 CTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCC 168401
|| || || ||||||| ||| | || ||||| ||||| ||||| || || ||||| ||
Sbjct 5951 TTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCC 5892
Query 168402 CTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGG 168461
|| || ||| | || || ||||| |||||||||||| | |||||||||||||| ||
Sbjct 5891 ATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGG 5832
Query 168462 AAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGG 168521
||||| |||||| | | | || || || || |||| ||||| || | ||
Sbjct 5831 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGG 5772
Query 168522 TTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGG 168581
|||||| ||||| ||||| |||||||| || || || ||||| ||||||||||| || ||
Sbjct 5771 TTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGG 5712
Query 168582 TCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGC 168641
|| |||||||||||||| || ||||||||||| || || || || |||||| | ||
Sbjct 5711 CCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGC 5652
Query 168642 TGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAA 168701
||| ||||| ||| |||| || ||||| || || | || | || ||||| |||||
Sbjct 5651 TGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 5592
Query 168702 CCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACAC 168761
| || |||||||| ||||| || || | ||||| |||| |||||||| | || ||
Sbjct 5591 TTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 5532
Query 168762 CTGGGCAGATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 168821
||| || ||| | | ||||||||| || |||||||||||||||||||| ||||| ||
Sbjct 5531 CTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 5472
Query 168822 ACACAACTTCCCACTCGATCTTGCTG 168847
|| |||||||| || || || ||||
Sbjct 5471 TCATAACTTCCCTCTAGACCTAGCTG 5446
>seq7678
Length=557
Score = 365 bits (404), Expect = 5e-96
Identities = 331/417 (79%), Gaps = 0/417 (0%)
Strand=Plus/Minus
Query 168466 TTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTAC 168525
||||||||||| || | || | || || || ||||||||||| |||||||||||||||
Sbjct 542 TTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTAC 483
Query 168526 AAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGT 168585
||||||||||||||||||||||| |||||||||||||| || || |||||||| |||||
Sbjct 482 AAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCGG 423
Query 168586 TTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCA 168645
|||||||||||||||||||| ||||||||| ||| || ||||||||||| | ||||||
Sbjct 422 TTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTTCTTGGCTGCA 363
Query 168646 TGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTG 168705
||||| || |||| |||||||| ||||| | || || ||| ||||| |||||||||
Sbjct 362 TGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGCGTTCAACCTG 303
Query 168706 AACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGG 168765
||||| |||||||||||||| || | | ||| ||| ||||| || | || |||
Sbjct 302 AACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCATCGCTACTTGG 243
Query 168766 GCAGATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACAC 168825
|| || || | ||||||||| ||||||||||||| ||||| ||||||||||| |||
Sbjct 242 GCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCGTAACGCTCAC 183
Query 168826 AACTTCCCACTCGATCTTGCTGCTGCTGAGTCCACACCTGTGGCCTTGATTGCTCCT 168882
|||||||| | || | ||||||| ||| | |||||||| || | ||| |||
Sbjct 182 AACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAACTGCACCT 126
>seq7307
Length=548
Score = 228 bits (252), Expect = 9e-55
Identities = 334/470 (71%), Gaps = 2/470 (0%)
Strand=Plus/Plus
Query 169851 TCCACATGATGGGTGTAGCAGGAATCTTGGGCGGAGCATTGCTTTCTGCTATCCATGGTG 169910
||||||||||||| ||||| || | | || ||||| | | | ||| || || || |
Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60
Query 169911 TTACAGTAGAGAACACATTGTATGAAGACGGTGA-GCAGGCAAATACTTTCAAGGCGTTT 169969
|||||||| ||||| || | |||||||||||| ||| |||| || ||| || ||
Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAA-ACCTTCCGCGCCTTC 119
Query 169970 GATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAG 170029
| | || || | |||||| || || || ||||| || || ||||| |||||||| |||
Sbjct 120 AACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAG 179
Query 170030 ATCTTCGGTATTGCGTTTTCTAACAAGCGTTGGCTTCATTTTTTCATGTTGTTTGTGCCT 170089
|| |||||||| || || || ||||| || ||| | || || |||||| ||||||| ||
Sbjct 180 ATATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCA 239
Query 170090 GTTATGGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTCGTGCT 170149
|| | || | |||| | || | || || | || | || | || || || |||
Sbjct 240 GTCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCT 299
Query 170150 TACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTAC 170209
||||| ||||| || || | | ||||||||||| ||||||||||| || |||||
Sbjct 300 TACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTAT 359
Query 170210 ACCAAAAACATCCTATTGAATGAAGGACTTCGTGCATGGTTGGCACCTGCTGATCAACCA 170269
||||||||||| | |||| || || | || || ||| |||| ||| ||||| ||
Sbjct 360 ACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCT 419
Query 170270 CATGAAAACTTCATCTTCCCAGAAGAAGTTCTTCCGAGAGGTAACGCACT 170319
|| ||| | || | |||||||| || ||||| || | |||||||| ||
Sbjct 420 CACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCT 469
>seq7318
Length=447
Score = 197 bits (218), Expect = 2e-45
Identities = 243/332 (73%), Gaps = 0/332 (0%)
Strand=Plus/Plus
Query 169688 AATGCTATTGCATTCTCTGGTCCTATTGCTGTATTTGTCAGTGTCTTTCTTATCTACCCA 169747
||||| || ||||| |||||||| |||||||| ||||| ||| ||||| || || |||
Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60
Query 169748 CTTGGACAGTCCTCATGGTTCTTTGCTCCCTCCTTTGGAGTATCAGCAATCTTCAGGTTC 169807
|| || ||| | ||||| ||||| || ||||| ||| |||| || || | |||
Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120
Query 169808 CTGTTGTTCCTGCAAGGATTCCACAACTGGACGTTGAATCCATTCCACATGATGGGTGTA 169867
| | || | ||||| || || || ||||| ||||| ||||| || |||||||| ||
Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180
Query 169868 GCAGGAATCTTGGGCGGAGCATTGCTTTCTGCTATCCATGGTGTTACAGTAGAGAACACA 169927
|| || | ||||||| || |||| | ||||| ||||||| || ||||| || ||
Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240
Query 169928 TTGTATGAAGACGGTGAGCAGGCAAATACTTTCAAGGCGTTTGATTCGACACAGGAAGAA 169987
|| | |||||| ||||| |||||||| ||| ||| ||| | | || || | |||
Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300
Query 169988 GAGACTTATTCTATGGTCACTGCAAACCGCTT 170019
|| |||||||| ||||||||||| ||||||||
Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTT 332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 574409553374520
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