Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_015281.1 Length=179563 Score E Sequences producing significant alignments: (Bits) Value seq8857 549 2e-151 seq7678 365 5e-96 seq7307 228 9e-55 seq7318 197 2e-45 >seq8857 Length=8770 Score = 549 bits (608), Expect = 2e-151 Identities = 715/986 (73%), Gaps = 2/986 (0%) Strand=Plus/Minus Query 167863 TTCTGCGAGTGGGTAACATCAACTAACAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 167922 ||||| | ||| |||| ||| | |||||||| || | || ||||| || || || Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371 Query 167923 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 167981 ||||| || || | ||| | |||||| ||||| || ||| | |||||| | |||||||| Sbjct 6370 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATCATAGCCTTCATTGCTGCTCC 6312 Query 167982 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 168041 || || || || || || || |||||||| || |||| || | | || || ||||| Sbjct 6311 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAA 6252 Query 168042 CATCATCTCTGGTGCAGTTGTCCCTTCTTCTAATGCTATTGGACTTCACTTCTATCCCAT 168101 || ||||| ||||| || | ||| ||||| ||||| || | ||||| ||||| || Sbjct 6251 TATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAAT 6192 Query 168102 CTGGGAAGCAGCATCACTCGATGAGTGGTTGTATAACGGTGGTCCTTTCCAACTAGTAGT 168161 |||||||| ||||| | ||||| ||||| || || |||||||||| | ||| | || Sbjct 6191 ATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 6132 Query 168162 CTTTCACTTCCTCATCGGTATCTATGCATACATGGGACGTGAATGGGAACTTTCATATCG 168221 | |||||| | | ||| | | |||||||| ||||| |||||||| | || Sbjct 6131 TCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCG 6072 Query 168222 TTTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCAGCGAGTGC 168281 | | |||||||| || ||||| |||||| || || || || || || || || | ||| Sbjct 6071 TCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGC 6012 Query 168282 AGTATTCCTAGTGTATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAAT 168341 || ||| | | || || | |||||||| || || ||||||| ||||| || || || Sbjct 6011 TGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCAT 5952 Query 168342 CTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCC 168401 || || || ||||||| ||| | || ||||| ||||| ||||| || || ||||| || Sbjct 5951 TTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCC 5892 Query 168402 CTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGG 168461 || || ||| | || || ||||| |||||||||||| | |||||||||||||| || Sbjct 5891 ATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGG 5832 Query 168462 AAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGG 168521 ||||| |||||| | | | || || || || |||| ||||| || | || Sbjct 5831 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGG 5772 Query 168522 TTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGG 168581 |||||| ||||| ||||| |||||||| || || || ||||| ||||||||||| || || Sbjct 5771 TTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGG 5712 Query 168582 TCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGC 168641 || |||||||||||||| || ||||||||||| || || || || |||||| | || Sbjct 5711 CCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGC 5652 Query 168642 TGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAA 168701 ||| ||||| ||| |||| || ||||| || || | || | || ||||| ||||| Sbjct 5651 TGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 5592 Query 168702 CCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACAC 168761 | || |||||||| ||||| || || | ||||| |||| |||||||| | || || Sbjct 5591 TTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 5532 Query 168762 CTGGGCAGATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 168821 ||| || ||| | | ||||||||| || |||||||||||||||||||| ||||| || Sbjct 5531 CTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 5472 Query 168822 ACACAACTTCCCACTCGATCTTGCTG 168847 || |||||||| || || || |||| Sbjct 5471 TCATAACTTCCCTCTAGACCTAGCTG 5446 >seq7678 Length=557 Score = 365 bits (404), Expect = 5e-96 Identities = 331/417 (79%), Gaps = 0/417 (0%) Strand=Plus/Minus Query 168466 TTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTAC 168525 ||||||||||| || | || | || || || ||||||||||| ||||||||||||||| Sbjct 542 TTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTAC 483 Query 168526 AAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGT 168585 ||||||||||||||||||||||| |||||||||||||| || || |||||||| ||||| Sbjct 482 AAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCGG 423 Query 168586 TTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCA 168645 |||||||||||||||||||| ||||||||| ||| || ||||||||||| | |||||| Sbjct 422 TTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTTCTTGGCTGCA 363 Query 168646 TGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTG 168705 ||||| || |||| |||||||| ||||| | || || ||| ||||| ||||||||| Sbjct 362 TGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGCGTTCAACCTG 303 Query 168706 AACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGG 168765 ||||| |||||||||||||| || | | ||| ||| ||||| || | || ||| Sbjct 302 AACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCATCGCTACTTGG 243 Query 168766 GCAGATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACAC 168825 || || || | ||||||||| ||||||||||||| ||||| ||||||||||| ||| Sbjct 242 GCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCGTAACGCTCAC 183 Query 168826 AACTTCCCACTCGATCTTGCTGCTGCTGAGTCCACACCTGTGGCCTTGATTGCTCCT 168882 |||||||| | || | ||||||| ||| | |||||||| || | ||| ||| Sbjct 182 AACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAACTGCACCT 126 >seq7307 Length=548 Score = 228 bits (252), Expect = 9e-55 Identities = 334/470 (71%), Gaps = 2/470 (0%) Strand=Plus/Plus Query 169851 TCCACATGATGGGTGTAGCAGGAATCTTGGGCGGAGCATTGCTTTCTGCTATCCATGGTG 169910 ||||||||||||| ||||| || | | || ||||| | | | ||| || || || | Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60 Query 169911 TTACAGTAGAGAACACATTGTATGAAGACGGTGA-GCAGGCAAATACTTTCAAGGCGTTT 169969 |||||||| ||||| || | |||||||||||| ||| |||| || ||| || || Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAA-ACCTTCCGCGCCTTC 119 Query 169970 GATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAG 170029 | | || || | |||||| || || || ||||| || || ||||| |||||||| ||| Sbjct 120 AACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAG 179 Query 170030 ATCTTCGGTATTGCGTTTTCTAACAAGCGTTGGCTTCATTTTTTCATGTTGTTTGTGCCT 170089 || |||||||| || || || ||||| || ||| | || || |||||| ||||||| || Sbjct 180 ATATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCA 239 Query 170090 GTTATGGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTCGTGCT 170149 || | || | |||| | || | || || | || | || | || || || ||| Sbjct 240 GTCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCT 299 Query 170150 TACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTAC 170209 ||||| ||||| || || | | ||||||||||| ||||||||||| || ||||| Sbjct 300 TACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTAT 359 Query 170210 ACCAAAAACATCCTATTGAATGAAGGACTTCGTGCATGGTTGGCACCTGCTGATCAACCA 170269 ||||||||||| | |||| || || | || || ||| |||| ||| ||||| || Sbjct 360 ACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCT 419 Query 170270 CATGAAAACTTCATCTTCCCAGAAGAAGTTCTTCCGAGAGGTAACGCACT 170319 || ||| | || | |||||||| || ||||| || | |||||||| || Sbjct 420 CACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCT 469 >seq7318 Length=447 Score = 197 bits (218), Expect = 2e-45 Identities = 243/332 (73%), Gaps = 0/332 (0%) Strand=Plus/Plus Query 169688 AATGCTATTGCATTCTCTGGTCCTATTGCTGTATTTGTCAGTGTCTTTCTTATCTACCCA 169747 ||||| || ||||| |||||||| |||||||| ||||| ||| ||||| || || ||| Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 169748 CTTGGACAGTCCTCATGGTTCTTTGCTCCCTCCTTTGGAGTATCAGCAATCTTCAGGTTC 169807 || || ||| | ||||| ||||| || ||||| ||| |||| || || | ||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 169808 CTGTTGTTCCTGCAAGGATTCCACAACTGGACGTTGAATCCATTCCACATGATGGGTGTA 169867 | | || | ||||| || || || ||||| ||||| ||||| || |||||||| || Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 169868 GCAGGAATCTTGGGCGGAGCATTGCTTTCTGCTATCCATGGTGTTACAGTAGAGAACACA 169927 || || | ||||||| || |||| | ||||| ||||||| || ||||| || || Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 169928 TTGTATGAAGACGGTGAGCAGGCAAATACTTTCAAGGCGTTTGATTCGACACAGGAAGAA 169987 || | |||||| ||||| |||||||| ||| ||| ||| | | || || | ||| Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 169988 GAGACTTATTCTATGGTCACTGCAAACCGCTT 170019 || |||||||| ||||||||||| |||||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTT 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574409553374520