Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq8857 612 2e-170 seq7678 412 4e-110 seq7307 260 2e-64 seq7318 239 5e-58 >seq8857 Length=8770 Score = 612 bits (678), Expect = 2e-170 Identities = 715/960 (74%), Gaps = 4/960 (0%) Strand=Plus/Minus Query 163812 AACCGCCTCTATGTTGGTTGGTTCGGCGTTCTGATGATCCCTACGCTGCTTG-CAGCAAC 163870 |||||||| || |||| ||||| || ||| ||||||||||||| || ||| | ||||| Sbjct 6403 AACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTAC-CTTATTGACCGCAAC 6345 Query 163871 CATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGATGGTATTCGTG 163929 ||||| || ||| | |||||| | |||||||| || || || || ||||||||||||| Sbjct 6344 T-TCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTG 6286 Query 163930 AACCTGTTGCAGGTTCGCTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCT 163989 |||||||| | || || | | || || ||||| || ||||| ||||| || |||| Sbjct 6285 AACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTA 6226 Query 163990 CGTCCAATGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCCGCATCCCTTGATGAAT 164049 | || || || ||| | ||||| || || || |||||||| ||||| ||||||||| Sbjct 6225 CTTCTGCGGCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAAT 6166 Query 164050 GGCTTTACAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTTCCTGATCGGTATCTATG 164109 || | ||||| |||||||||| | || | || | |||||| | | ||| | | Sbjct 6165 GGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTT 6106 Query 164110 CATACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTATGCGTCCTTGGATTTGTG 164169 |||||||||||||||||||||||| || |||||| |||||||| ||||||||| || Sbjct 6105 GTTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTG 6046 Query 164170 TTGCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTC 164229 |||| || || || || |||||||| || | || || ||| || | || || | |||| Sbjct 6045 TTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTC 5986 Query 164230 AAGGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTGG 164289 |||| || ||||| | ||||| || ||||| ||||| || ||||||| ||| | | Sbjct 5985 AAGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTG 5926 Query 164290 TGTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCG 164349 | ||||| || || ||||||||||| |||||||| || || ||| | || || ||||| | Sbjct 5925 TATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTG 5866 Query 164350 TATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTC 164409 ||||||| || || || || ||||| ||||| ||||| |||| |||||| || | Sbjct 5865 TATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCA 5806 Query 164410 GTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAA 164469 | ||||| || |||| ||| || || | |||||||| || |||||||| ||||||| Sbjct 5805 GGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAA 5746 Query 164470 CATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCAT 164529 | || || ||||| || ||||| ||||| ||||| || ||||||||||||| || | Sbjct 5745 CTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTT 5686 Query 164530 TCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGGT 164589 |||||||||| ||||| || || |||||| | ||||| ||||| ||| | || || |||| Sbjct 5685 TCAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGT 5626 Query 164590 TCACCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGT 164649 | || || | ||| || || ||||| ||||| | || |||||||| ||||| || | Sbjct 5625 TTACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAAT 5566 Query 164650 CCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCTG 164709 | | | ||| |||| |||||||| | || || || || || | | ||||||||| Sbjct 5565 CTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTA 5506 Query 164710 GTCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTGGATCTCGCTG 164769 || ||||||||||||||||| || ||||| ||||| ||||||||||| || || |||| Sbjct 5505 ACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTG 5446 >seq7678 Length=557 Score = 412 bits (456), Expect = 4e-110 Identities = 351/433 (81%), Gaps = 0/433 (0%) Strand=Plus/Minus Query 164378 GCACGGTTCTCTGGTTACTTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAA 164437 ||||||||| |||||||||| || |||| ||||||||||| ||||| || || || || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 164438 CTATGGTTACAAGTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTA 164497 ||| ||||||||||| || |||||||||||||| |||||||| || || || |||||||| Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 164498 CTTTGGTCGTCTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTT 164557 ||||||||| ||||||||||||||||||| ||||||||| |||||| |||||||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373 Query 164558 CCTTGCTGCATGGCCTGTTGTTGGCATCTGGTTCACCGCACTTGGTGTTTCCACGATGGC 164617 | | ||||||||||| || | || |||||||| ||||| | ||| | ||| ||||| Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313 Query 164618 ATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCT 164677 |||||||||||||| |||||||||||||| || | |||||| ||| ||||| || | Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253 Query 164678 CAACACTTGGGCAGACGTTCTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCG 164737 | |||||||| ||||| ||||||||||| ||||||||||||| ||||||||||| Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193 Query 164738 TAACGCTCACAACTTCCCTCTGGATCTCGCTGCTGCTGAGTCCACTCCTGTCGCTCTGAC 164797 |||||||||||||||||| | || | ||||||| ||| ||||||| ||| | || Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAAC 133 Query 164798 TGCACCCGCTATc 164810 |||||| || ||| Sbjct 132 TGCACCTGCAATC 120 >seq7307 Length=548 Score = 260 bits (288), Expect = 2e-64 Identities = 340/468 (73%), Gaps = 2/468 (0%) Strand=Plus/Plus Query 165740 CATATGATGGGTGTTGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCCATCCATGGTGTT 165799 || |||||||| || || ||| | || ||||| || | | | |||||| || || | Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62 Query 165800 ACAGTAGAGAATACTCTGTATCAAGATGGTGACG-ATGCAAATACTTTCAAGGCATTTGA 165858 |||||||| || || | | | |||| ||||| | || |||| || ||| || || | Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAA-ACCTTCCGCGCCTTCAA 121 Query 165859 CTCTACTCAAGAGGAAGAAACCTACTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGAT 165918 || || |||| |||||||||||||| ||||| || || ||||| |||||||| ||||| Sbjct 122 CTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGAT 181 Query 165919 CTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGT 165978 |||||||| || || || || ||||||| || ||||| ||||||||||| || || Sbjct 182 ATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAGT 241 Query 165979 TATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTA 166038 | || | |||| || | || || | ||| | || | ||||| || ||||| Sbjct 242 CACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTTA 301 Query 166039 TGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACAC 166098 ||||| ||||||||||| | | ||||||||||||||||| |||||||| ||||| || Sbjct 302 CGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATAC 361 Query 166099 GAAAAACATTCTCTTGAATGAAGGTCTTCGTGCTTGGTTGGCACCAGTCGATCAACCGCA 166158 ||||||||| | |||| || ||| | || |||||| |||| || ||||| || || Sbjct 362 CAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTCA 421 Query 166159 TGAGAACTTTGTCTTCCCTGAAGAAGTTCTGCCTAGGGGTAACGCGCT 166206 || | ||||| ||||| || || ||||| ||| | |||||||| || Sbjct 422 CGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCT 469 >seq7318 Length=447 Score = 239 bits (264), Expect = 5e-58 Identities = 259/341 (76%), Gaps = 2/341 (1%) Strand=Plus/Plus Query 165575 AATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCT 165634 ||||| || || || |||||||| || |||||||||||| || ||||| || || || Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 165635 CTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCGCAGCAATCTTCAGGTTC 165694 |||||||| | |||||||||| || || ||| || || ||||| || || | ||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 165695 CTTCTCTTCCTACAAGGATTCCATAACTGGACCTTGAATCCCTTTCATATGATGGGTGTT 165754 | || || | ||||| || ||||| ||||||||||| || |||||||||||||| ||| Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 165755 GCAGGTATCCTGGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAATACT 165814 || ||| | |||| | || |||| | || || ||||||| || ||||| |||||| Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 165815 CTGTATCAAGATGGTGACGATGCAAATACTTTCAAGGCATTTGACTCTACTCAAGAGGAA 165874 | | | |||||||||| | ||||||||| ||| ||| ||| || | ||||||| ||| Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 165875 GAAACCTACTCAATGGTTACTGCAAACCG-TTTCTGGTCTC 165914 ||||| || |||||||| ||||| ||||| ||||| ||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCT-GTCTC 340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556862709846360