Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq8857 569 2e-157 seq7678 271 9e-68 >seq8857 Length=8770 Score = 569 bits (630), Expect = 2e-157 Identities = 718/984 (73%), Gaps = 2/984 (0%) Strand=Plus/Minus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| |||||| | ||| | ||||| |||| ||||| ||||| || Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609 |||||||| ||||| || ||| | | ||| || || | || || |||||||| || Sbjct 6370 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATCATAGCCTTCATTGCTGCTCC 6312 Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669 || || ||||| || || || | |||||||| | || || | | || |||||||| Sbjct 6311 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAA 6252 Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729 || ||||| ||||| || |||| |||| || |||||| | ||||| || ||||| Sbjct 6251 TATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAAT 6192 Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789 |||||||| || | | ||||| |||||||| |||||||||||||| || | | | Sbjct 6191 ATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 6132 Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAG 168849 | |||||| || | || | || ||||||||| | |||||||| | | | | Sbjct 6131 TCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCG 6072 Query 168850 ACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGC 168909 || |||||| | |||||||| |||||| |||||||| || || | || || ||| Sbjct 6071 TCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGC 6012 Query 168910 AGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAAT 168969 || ||| | | |||||| ||||||| || || |||||||||||||||||||| || Sbjct 6011 TGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCAT 5952 Query 168970 TTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCC 169029 |||||| || |||||||| ||| | |||||||| || || |||||||| |||||||| || Sbjct 5951 TTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCC 5892 Query 169030 CTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGG 169089 || || ||| ||| ||||| ||| | || ||||| || ||||| || |||||||| Sbjct 5891 ATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGG 5832 Query 169090 TTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGG 169149 ||| | ||||| ||| | | ||||| || ||||| || | |||||| || | || Sbjct 5831 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGG 5772 Query 169150 TTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGG 169209 |||||| ||||||||||| |||||||| ||||||||||| || || ||||| || || || Sbjct 5771 TTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGG 5712 Query 169210 TAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGC 169269 |||| |||||||| |||||||||||||||||||| | | | || |||||| |||| Sbjct 5711 CCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGC 5652 Query 169270 AGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAA 169329 | | || ||| | || | ||||| || || | ||||| |||| ||||| ||||| Sbjct 5651 TGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 5592 Query 169330 CTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTAC 169389 || || || || || || || ||||| || || ||| | | ||| | ||| ||| Sbjct 5591 TTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 5532 Query 169390 ATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGC 169449 || | ||| | ||||| | || ||||||||||||||||| |||||||| ||||| || Sbjct 5531 CTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 5472 Query 169450 TCACAACTTCCCACTAGACTTAGC 169473 ||| |||||||| |||||| |||| Sbjct 5471 TCATAACTTCCCTCTAGACCTAGC 5448 >seq7678 Length=557 Score = 271 bits (300), Expect = 9e-68 Identities = 293/387 (76%), Gaps = 6/387 (2%) Strand=Plus/Minus Query 169133 GAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCA 169192 ||||| || ||||| |||||||||||||| ||||||||||||||||| || || || || Sbjct 503 GAATCACAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCT 444 Query 169193 GCACATGGATACTTCGGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGT 169252 ||||| || ||||| ||| | || |||||||| || || ||||||||| || || Sbjct 443 GCACACGGTTACTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAAC---AGCCGT 387 Query 169253 ---CTTCACTTCTTCCTAGCAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGT 169309 || ||||||||| | || | | ||||| | || | ||||| ||| || | ||| Sbjct 386 TCACTGCACTTCTTCTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGT 327 Query 169310 ATCTGTACAATGGCATTCAACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTT 169369 ||| | |||||||| |||||| |||||||||| ||||| ||||||||||| | ||| | Sbjct 326 ATCAGCACAATGGCGTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCT 267 Query 169370 AACGGTAAGATCATTCCTACATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAA 169429 | ||| |||| |||| |||| ||||||| | ||| | || ||| | ||||||||| Sbjct 266 CAAGGTCGCGTCATCGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAA 207 Query 169430 GTAATGCATGAGCGTAACGCTCACAACTTCCCACTAGACTTAGCATCTGCTGAGACTACA 169489 || ||||| ||||||||||||||||||||||| ||||||| || ||| ||| | | Sbjct 206 GTCATGCACGAGCGTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCT 147 Query 169490 GAGGTTGCTTTAACTGCACCAACAATC 169516 || |||||||||||||| ||||| Sbjct 146 CCTGTGGCTTTAACTGCACCTGCAATC 120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564378671817120