Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq8857 477 1e-129 seq7678 304 2e-77 seq7307 246 4e-60 seq2177 149 7e-31 seq4590 111 2e-19 seq7318 105 8e-18 >seq8857 Length=8770 Score = 477 bits (528), Expect = 1e-129 Identities = 696/984 (71%), Gaps = 0/984 (0%) Strand=Plus/Minus Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879 ||||| | ||| ||||| ||| | ||| | |||| |||| ||||| ||||| | Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371 Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939 |||||||| || | || ||| | | || ||| | || |||||||| || ||| Sbjct 6370 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATCATAGCCTTCATTGCTGCTCCT 6311 Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 171999 || || ||||| || || || | ||||| ||| | || ||||| | || || ||||| Sbjct 6310 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAAT 6251 Query 172000 ATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATC 172059 || ||||| ||||| || |||| | || || || ||| | ||||| || || || Sbjct 6250 ATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAATA 6191 Query 172060 TGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATC 172119 |||||||| ||| | || ||||||||||| |||||||||||||||||| || | | | Sbjct 6190 TGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTT 6131 Query 172120 TTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGA 172179 | |||||| | | ||| | | |||||||| | |||||||||| | | | Sbjct 6130 CTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCGT 6071 Query 172180 TTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCT 172239 | |||||| | || ||||| ||| || |||||||| ||||| |||| || |||| Sbjct 6070 CTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCT 6011 Query 172240 GTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATC 172299 || ||| | | || ||| | ||||| || || |||||||||||||| ||||| || Sbjct 6010 GTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCATT 5951 Query 172300 TCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCT 172359 || ||||| |||||||||||| | || ||||| || || || ||||| || ||||| || Sbjct 5950 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCCA 5891 Query 172360 TTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGT 172419 || |||||| ||| ||||| || | ||||| || || |||| || ||||| ||| Sbjct 5890 TTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGGT 5831 Query 172420 TCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGA 172479 || || || || ||| | | ||||| || || || ||| ||||| || | || Sbjct 5830 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGT 5771 Query 172480 TACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGT 172539 ||||| ||||| ||||| |||||||| || || || ||||| || || ||||| ||||| Sbjct 5770 TACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGC 5711 Query 172540 CGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 172599 || | |||||||| ||||| |||||||||||| | | | || |||||| |||| Sbjct 5710 CGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGCT 5651 Query 172600 GTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 172659 | || || ||| | || | ||||| || || | ||||| |||| ||||| ||||| Sbjct 5650 GCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 5591 Query 172660 CTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACA 172719 | || |||||||| ||||| ||||| || || ||| | | ||| | || ||| Sbjct 5590 TTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC 5531 Query 172720 TGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCA 172779 || | ||| | ||||| | || ||||| ||||||||||||||||||||| | ||||| Sbjct 5530 TGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 5471 Query 172780 CACAACTTCCCATTAGACCTTGCT 172803 || |||||||| ||||||| ||| Sbjct 5470 CATAACTTCCCTCTAGACCTAGCT 5447 >seq7678 Length=557 Score = 304 bits (336), Expect = 2e-77 Identities = 329/435 (76%), Gaps = 6/435 (1%) Strand=Plus/Minus Query 172413 GCACGGTTCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAA 172472 ||||||||| || ||||| || || | | | || || || ||| | |||||||| || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 172473 CTACGGATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTA 172532 |||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||| Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 172533 CTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGT---CTTCACTT 172589 ||||||||| | |||||||| || ||||| ||||||||| || || || ||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAAC---AGCCGTTCACTGCACTT 376 Query 172590 CTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAAT 172649 |||| | || | | || || | || | ||||| ||| || | |||||| | ||||| Sbjct 375 CTTCTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAAT 316 Query 172650 GGCATTCAACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGAT 172709 ||| |||||||| ||||| |||||||||||||||||||| | ||| || | ||| | Sbjct 315 GGCGTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGT 256 Query 172710 TGTTCCTACATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGA 172769 | |||| |||| |||||| | ||| | || ||| | ||||||||||| ||||| || Sbjct 255 CATCGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGA 196 Query 172770 AAGAAATGCACACAACTTCCCATTAGACCTTGCTTCTGCAGAGTCTTCAACAGTTGCTTT 172829 | || || ||||||||||| |||||| | ||| ||| || | | | || ||||| Sbjct 195 GCGTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTT 136 Query 172830 AACAGCACCTTCAAT 172844 ||| |||||| |||| Sbjct 135 AACTGCACCTGCAAT 121 >seq7307 Length=548 Score = 246 bits (272), Expect = 4e-60 Identities = 350/494 (71%), Gaps = 25/494 (5%) Strand=Plus/Plus Query 173497 CACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCATGGTGCA 173556 ||||||||||| || || || |||| |||||||| || | ||||||||||| || || Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62 Query 173557 ACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTAAGATTCAATCC 173616 ||||| | ||||| || | ||||||| ||||| |||| Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGG------------TGAAGC---------ATCC 101 Query 173617 ACAACTTTCAGAGCATTTGATCCTACAC--AGGAAGAAGAAACTTATAGTATGATTACAG 173674 | ||| ||| | || || | |||||| | | ||||||||| || ||| | |||| Sbjct 102 AAAACCTTCCGCGCCTTCAA--CTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAG 159 Query 173675 CGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTACACT 173734 ||||| ||||||||||||||||||| |||||||| || || |||||| | | ||||||| Sbjct 160 CGAACCGATTCTGGTCACAGATATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACT 219 Query 173735 TCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTAGGTC 173794 || ||||| |||| ||||| |||| || |||||| | || |||| ||||| ||| Sbjct 220 TCTTCATGCTGTTTGTACCAGTCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTT 279 Query 173795 TTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGATC 173854 | ||| | ||||| | || |||||||| ||||| ||||| | | ||||||||||| | Sbjct 280 TAGCATTGAACCTCCGGGCTTACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACC 339 Query 173855 CAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCATGGA 173914 |||| || || || ||||| || || || || | || || || ||||| | || |||| Sbjct 340 CAGAATTTGAAACATTCTATACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGA 399 Query 173915 TGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTACCAAGAG 173974 || | || |||||| || || || | || ||||| ||||| || || |||| | | Sbjct 400 TGGCTCCTCAAGATCAGCCTCACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTG 459 Query 173975 GTAACGCACTTTAA 173988 ||||||| || ||| Sbjct 460 GTAACGCTCTCTAA 473 >seq2177 Length=136605 Score = 149 bits (164), Expect = 7e-31 Identities = 338/504 (67%), Gaps = 12/504 (2%) Strand=Plus/Plus Query 159277 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 159336 || ||||| || ||| ||| || |||||||| || |||| | || ||||| ||| | Sbjct 6447 ATTACAGGTTTCGATGGTATTTCTTTACAACCAAATTCAGGTGCTCAAGGTGAATATACT 6506 Query 159337 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 159396 || ||| || |||| | | |||| || | ||| || || | | || || ||| Sbjct 6507 GGTCTGAGAGTAATCAGATCCTACCTGGAAAGCAAAGGTGAAAATCATCGTAACGTGTGT 6566 Query 159397 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAA 159456 || || || | || || ||||| || ||||| || || || | ||||| || | ||| Sbjct 6567 TTAATCCCTGTATCCGCTCATGGTACAAATCCGGCTTCTGCCGCTATGGCGGGTTTAAAA 6626 Query 159457 GTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAA 159516 ||||| |||||| ||| | |||||| |||| | || || |||| || Sbjct 6627 GTTGTTCCTGTCAACTGTTTGCAGGATGGCTCATTAGATCTGGTTGACTTAAAGAATAAG 6686 Query 159517 GCAATCATGAATA-CATTT----GAACTGTCATGTATTATGATTACATATCCATCTACAC 159571 || |||| | |||| ||||| | | ||||| || ||||| ||||| Sbjct 6687 GC-----TGAACAACATTCTAAAGAACTAGCCGCCGTAATGATCACCTATCCTTCTACTT 6741 Query 159572 ATGGTGTATTTGAAACAAACATCAGACA-GATATGTAAGATTGTTCATGAGAATGGTGGT 159630 | ||| |||||||| || |||| ||| | ||| | | || || ||| |||||| Sbjct 6742 ACGGTTTATTTGAACCAGGCATCCAACATGCTAT-TGATATCGTACATTCTTTTGGTGGA 6800 Query 159631 CAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGAC 159690 || || ||| | |||||||| ||| | ||||| ||||| || ||| | ||| | || Sbjct 6801 CAAGTCTATTTGGATGGTGCTAATATGAATGCGCAGGTTGGGCTAACTTCACCCGGAGAT 6860 Query 159691 TATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGT 159750 |||||||||||| || || | || |||||||||||||||| ||||| ||||| ||| Sbjct 6861 CTTGGTGCAGATGTTTGCCACTTGAATTTACATAAGACATTCTCCATTCCTCATGGTGGT 6920 Query 159751 GGAGGTCCTGGCGTAGGTCCTATT 159774 || ||||| | | || ||| ||| Sbjct 6921 GGTGGTCCAGCTGGAGCTCCCATT 6944 >seq4590 Length=221010 Score = 111 bits (122), Expect = 2e-19 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 |||||||| ||| |||| ||||| || || |||||||||||||| || || || | Sbjct 47737 CAAAGGTTCGGTGTTCCAATGGGTTATGGTGGTCCTCATGCTGCCTTTTTCGCCGTTATT 47796 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562 || || || ||||| || |||||||||||||| ||| || || || |||| Sbjct 47797 GATAAACTGAACAGAAAAATTCCTGGCAGAATTGTTGGTATCTCCAAGGACCGCCTAGGT 47856 Query 158563 AATAAAG-CATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGC 158621 ||| | | ||| | ||||| |||| |||||||| ||||| || | | | || ||||| Sbjct 47857 AATCCTGCCCTAC-GTTTAGCTTTACAAACTAGAGAACAGCACATTAAACGTGATAAAGC 47915 Query 158622 AACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661 ||| ||||| ||||| || ||||| || |||||||| Sbjct 47916 AACTTCAAACATTTGCACCGCTCAAGCCCTTTTGGCTAAT 47955 Score = 102 bits (112), Expect = 1e-16 Identities = 179/258 (69%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 157880 TTATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTG 157939 |||| ||| | |||||||| || || || || ||||| || || ||||| | | | Sbjct 47153 TTATTGGTAAGGGATACTACGGCACGATTTTGCCGCCAGTTATTCAAAGAAACCTATTGG 47212 Query 157940 AGAATCCTAGT-TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 157998 | || || || |||||||| ||||| ||||| || || |||| ||||||||||| ||| Sbjct 47213 A-AAGCCCAGAATGGTACACTTCTTATACTCCATACCAGCCTGAAATATCTCAGGGTAGA 47271 Query 157999 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCA 158058 |||||||| ||| | || | |||||| | | | || | || || | || | ||| Sbjct 47272 TTGGAAGCATTACTAAACTTCCAAACAGTAGTTTCCGATTTGACTGGTTTGCCTGTGGCA 47331 Query 158059 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGCATATAAT 158118 ||||| || | || ||||||| || || || | ||||| ||||| | ||| |||| Sbjct 47332 AACGCCTCATTGTTGGATGAAGGTACCGCGGCTGGTGAAGCTATGCTACTGTCATTTAAT 47391 Query 158119 TCTACAAGAGATAAGAAG 158136 | | ||| | || ||| Sbjct 47392 ATTTCCAGAAAGAAAAAG 47409 >seq7318 Length=447 Score = 105 bits (116), Expect = 8e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 173377 TTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGTGTCGCA 173436 ||| |||| || ||||| || ||| ||||||| || || ||| || ||||| ||| Sbjct 46 TTTCTAATTTATCCACTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCA 105 Query 173437 GCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAATCCATTT 173496 || || ||||| | ||| |||| | ||||| || || || || ||||| |||||| Sbjct 106 GCTATATTTCGCTTCATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTT 165 Query 173497 CACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCATGGTGCA 173556 || |||||||| ||||| || || | || | || | ||||| || ||||||||||| Sbjct 166 CATATGATGGGAGTTGCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCG 225 Query 173557 ACAGTGCAGAACACATTGTATGAAGA 173582 || || | || || || | |||||| Sbjct 226 ACGGTAGAAAATACTTTATTTGAAGA 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587985639641840