Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 477 1e-129
seq7678 304 2e-77
seq7307 246 4e-60
seq2177 149 7e-31
seq4590 111 2e-19
seq7318 105 8e-18
>seq8857
Length=8770
Score = 477 bits (528), Expect = 1e-129
Identities = 696/984 (71%), Gaps = 0/984 (0%)
Strand=Plus/Minus
Query 171820 TTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTC 171879
||||| | ||| ||||| ||| | ||| | |||| |||| ||||| ||||| |
Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371
Query 171880 ATGATCCCATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCT 171939
|||||||| || | || ||| | | || ||| | || |||||||| || |||
Sbjct 6370 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATCATAGCCTTCATTGCTGCTCCT 6311
Query 171940 CCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAAC 171999
|| || ||||| || || || | ||||| ||| | || ||||| | || || |||||
Sbjct 6310 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAAT 6251
Query 172000 ATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATC 172059
|| ||||| ||||| || |||| | || || || ||| | ||||| || || ||
Sbjct 6250 ATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAATA 6191
Query 172060 TGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATC 172119
|||||||| ||| | || ||||||||||| |||||||||||||||||| || | | |
Sbjct 6190 TGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTT 6131
Query 172120 TTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGA 172179
| |||||| | | ||| | | |||||||| | |||||||||| | | |
Sbjct 6130 CTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCGT 6071
Query 172180 TTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCT 172239
| |||||| | || ||||| ||| || |||||||| ||||| |||| || ||||
Sbjct 6070 CTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCT 6011
Query 172240 GTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATC 172299
|| ||| | | || ||| | ||||| || || |||||||||||||| ||||| ||
Sbjct 6010 GTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCATT 5951
Query 172300 TCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCT 172359
|| ||||| |||||||||||| | || ||||| || || || ||||| || ||||| ||
Sbjct 5950 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCCA 5891
Query 172360 TTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGT 172419
|| |||||| ||| ||||| || | ||||| || || |||| || ||||| |||
Sbjct 5890 TTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGGT 5831
Query 172420 TCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGA 172479
|| || || || ||| | | ||||| || || || ||| ||||| || | ||
Sbjct 5830 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGT 5771
Query 172480 TACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGT 172539
||||| ||||| ||||| |||||||| || || || ||||| || || ||||| |||||
Sbjct 5770 TACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGC 5711
Query 172540 CGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 172599
|| | |||||||| ||||| |||||||||||| | | | || |||||| ||||
Sbjct 5710 CGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGCT 5651
Query 172600 GTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 172659
| || || ||| | || | ||||| || || | ||||| |||| ||||| |||||
Sbjct 5650 GCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 5591
Query 172660 CTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACA 172719
| || |||||||| ||||| ||||| || || ||| | | ||| | || |||
Sbjct 5590 TTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC 5531
Query 172720 TGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCA 172779
|| | ||| | ||||| | || ||||| ||||||||||||||||||||| | |||||
Sbjct 5530 TGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 5471
Query 172780 CACAACTTCCCATTAGACCTTGCT 172803
|| |||||||| ||||||| |||
Sbjct 5470 CATAACTTCCCTCTAGACCTAGCT 5447
>seq7678
Length=557
Score = 304 bits (336), Expect = 2e-77
Identities = 329/435 (76%), Gaps = 6/435 (1%)
Strand=Plus/Minus
Query 172413 GCACGGTTCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAA 172472
||||||||| || ||||| || || | | | || || || ||| | |||||||| ||
Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493
Query 172473 CTACGGATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTA 172532
|||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433
Query 172533 CTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGT---CTTCACTT 172589
||||||||| | |||||||| || ||||| ||||||||| || || || |||||
Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAAC---AGCCGTTCACTGCACTT 376
Query 172590 CTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAAT 172649
|||| | || | | || || | || | ||||| ||| || | |||||| | |||||
Sbjct 375 CTTCTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAAT 316
Query 172650 GGCATTCAACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGAT 172709
||| |||||||| ||||| |||||||||||||||||||| | ||| || | ||| |
Sbjct 315 GGCGTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGT 256
Query 172710 TGTTCCTACATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGA 172769
| |||| |||| |||||| | ||| | || ||| | ||||||||||| ||||| ||
Sbjct 255 CATCGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGA 196
Query 172770 AAGAAATGCACACAACTTCCCATTAGACCTTGCTTCTGCAGAGTCTTCAACAGTTGCTTT 172829
| || || ||||||||||| |||||| | ||| ||| || | | | || |||||
Sbjct 195 GCGTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTT 136
Query 172830 AACAGCACCTTCAAT 172844
||| |||||| ||||
Sbjct 135 AACTGCACCTGCAAT 121
>seq7307
Length=548
Score = 246 bits (272), Expect = 4e-60
Identities = 350/494 (71%), Gaps = 25/494 (5%)
Strand=Plus/Plus
Query 173497 CACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCATGGTGCA 173556
||||||||||| || || || |||| |||||||| || | ||||||||||| || ||
Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62
Query 173557 ACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTAAGATTCAATCC 173616
||||| | ||||| || | ||||||| ||||| ||||
Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGG------------TGAAGC---------ATCC 101
Query 173617 ACAACTTTCAGAGCATTTGATCCTACAC--AGGAAGAAGAAACTTATAGTATGATTACAG 173674
| ||| ||| | || || | |||||| | | ||||||||| || ||| | ||||
Sbjct 102 AAAACCTTCCGCGCCTTCAA--CTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAG 159
Query 173675 CGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTACACT 173734
||||| ||||||||||||||||||| |||||||| || || |||||| | | |||||||
Sbjct 160 CGAACCGATTCTGGTCACAGATATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACT 219
Query 173735 TCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTAGGTC 173794
|| ||||| |||| ||||| |||| || |||||| | || |||| ||||| |||
Sbjct 220 TCTTCATGCTGTTTGTACCAGTCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTT 279
Query 173795 TTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGATC 173854
| ||| | ||||| | || |||||||| ||||| ||||| | | ||||||||||| |
Sbjct 280 TAGCATTGAACCTCCGGGCTTACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACC 339
Query 173855 CAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCATGGA 173914
|||| || || || ||||| || || || || | || || || ||||| | || ||||
Sbjct 340 CAGAATTTGAAACATTCTATACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGA 399
Query 173915 TGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTACCAAGAG 173974
|| | || |||||| || || || | || ||||| ||||| || || |||| | |
Sbjct 400 TGGCTCCTCAAGATCAGCCTCACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTG 459
Query 173975 GTAACGCACTTTAA 173988
||||||| || |||
Sbjct 460 GTAACGCTCTCTAA 473
>seq2177
Length=136605
Score = 149 bits (164), Expect = 7e-31
Identities = 338/504 (67%), Gaps = 12/504 (2%)
Strand=Plus/Plus
Query 159277 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 159336
|| ||||| || ||| ||| || |||||||| || |||| | || ||||| ||| |
Sbjct 6447 ATTACAGGTTTCGATGGTATTTCTTTACAACCAAATTCAGGTGCTCAAGGTGAATATACT 6506
Query 159337 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 159396
|| ||| || |||| | | |||| || | ||| || || | | || || |||
Sbjct 6507 GGTCTGAGAGTAATCAGATCCTACCTGGAAAGCAAAGGTGAAAATCATCGTAACGTGTGT 6566
Query 159397 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAA 159456
|| || || | || || ||||| || ||||| || || || | ||||| || | |||
Sbjct 6567 TTAATCCCTGTATCCGCTCATGGTACAAATCCGGCTTCTGCCGCTATGGCGGGTTTAAAA 6626
Query 159457 GTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAA 159516
||||| |||||| ||| | |||||| |||| | || || |||| ||
Sbjct 6627 GTTGTTCCTGTCAACTGTTTGCAGGATGGCTCATTAGATCTGGTTGACTTAAAGAATAAG 6686
Query 159517 GCAATCATGAATA-CATTT----GAACTGTCATGTATTATGATTACATATCCATCTACAC 159571
|| |||| | |||| ||||| | | ||||| || ||||| |||||
Sbjct 6687 GC-----TGAACAACATTCTAAAGAACTAGCCGCCGTAATGATCACCTATCCTTCTACTT 6741
Query 159572 ATGGTGTATTTGAAACAAACATCAGACA-GATATGTAAGATTGTTCATGAGAATGGTGGT 159630
| ||| |||||||| || |||| ||| | ||| | | || || ||| ||||||
Sbjct 6742 ACGGTTTATTTGAACCAGGCATCCAACATGCTAT-TGATATCGTACATTCTTTTGGTGGA 6800
Query 159631 CAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGAC 159690
|| || ||| | |||||||| ||| | ||||| ||||| || ||| | ||| | ||
Sbjct 6801 CAAGTCTATTTGGATGGTGCTAATATGAATGCGCAGGTTGGGCTAACTTCACCCGGAGAT 6860
Query 159691 TATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGT 159750
|||||||||||| || || | || |||||||||||||||| ||||| ||||| |||
Sbjct 6861 CTTGGTGCAGATGTTTGCCACTTGAATTTACATAAGACATTCTCCATTCCTCATGGTGGT 6920
Query 159751 GGAGGTCCTGGCGTAGGTCCTATT 159774
|| ||||| | | || ||| |||
Sbjct 6921 GGTGGTCCAGCTGGAGCTCCCATT 6944
>seq4590
Length=221010
Score = 111 bits (122), Expect = 2e-19
Identities = 158/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502
|||||||| ||| |||| ||||| || || |||||||||||||| || || || |
Sbjct 47737 CAAAGGTTCGGTGTTCCAATGGGTTATGGTGGTCCTCATGCTGCCTTTTTCGCCGTTATT 47796
Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562
|| || || ||||| || |||||||||||||| ||| || || || ||||
Sbjct 47797 GATAAACTGAACAGAAAAATTCCTGGCAGAATTGTTGGTATCTCCAAGGACCGCCTAGGT 47856
Query 158563 AATAAAG-CATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGC 158621
||| | | ||| | ||||| |||| |||||||| ||||| || | | | || |||||
Sbjct 47857 AATCCTGCCCTAC-GTTTAGCTTTACAAACTAGAGAACAGCACATTAAACGTGATAAAGC 47915
Query 158622 AACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661
||| ||||| ||||| || ||||| || ||||||||
Sbjct 47916 AACTTCAAACATTTGCACCGCTCAAGCCCTTTTGGCTAAT 47955
Score = 102 bits (112), Expect = 1e-16
Identities = 179/258 (69%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 157880 TTATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTG 157939
|||| ||| | |||||||| || || || || ||||| || || ||||| | | |
Sbjct 47153 TTATTGGTAAGGGATACTACGGCACGATTTTGCCGCCAGTTATTCAAAGAAACCTATTGG 47212
Query 157940 AGAATCCTAGT-TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 157998
| || || || |||||||| ||||| ||||| || || |||| ||||||||||| |||
Sbjct 47213 A-AAGCCCAGAATGGTACACTTCTTATACTCCATACCAGCCTGAAATATCTCAGGGTAGA 47271
Query 157999 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCA 158058
|||||||| ||| | || | |||||| | | | || | || || | || | |||
Sbjct 47272 TTGGAAGCATTACTAAACTTCCAAACAGTAGTTTCCGATTTGACTGGTTTGCCTGTGGCA 47331
Query 158059 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGCATATAAT 158118
||||| || | || ||||||| || || || | ||||| ||||| | ||| ||||
Sbjct 47332 AACGCCTCATTGTTGGATGAAGGTACCGCGGCTGGTGAAGCTATGCTACTGTCATTTAAT 47391
Query 158119 TCTACAAGAGATAAGAAG 158136
| | ||| | || |||
Sbjct 47392 ATTTCCAGAAAGAAAAAG 47409
>seq7318
Length=447
Score = 105 bits (116), Expect = 8e-18
Identities = 147/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 173377 TTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGTGTCGCA 173436
||| |||| || ||||| || ||| ||||||| || || ||| || ||||| |||
Sbjct 46 TTTCTAATTTATCCACTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCA 105
Query 173437 GCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAATCCATTT 173496
|| || ||||| | ||| |||| | ||||| || || || || ||||| ||||||
Sbjct 106 GCTATATTTCGCTTCATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTT 165
Query 173497 CACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCATGGTGCA 173556
|| |||||||| ||||| || || | || | || | ||||| || |||||||||||
Sbjct 166 CATATGATGGGAGTTGCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCG 225
Query 173557 ACAGTGCAGAACACATTGTATGAAGA 173582
|| || | || || || | ||||||
Sbjct 226 ACGGTAGAAAATACTTTATTTGAAGA 251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587985639641840
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