Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq8857 533 2e-146 seq7678 349 4e-91 seq7307 235 6e-57 seq7318 233 2e-56 >seq8857 Length=8770 Score = 533 bits (590), Expect = 2e-146 Identities = 696/958 (73%), Gaps = 4/958 (0%) Strand=Plus/Minus Query 162412 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACC 162471 |||||||| || | || ||||| || || ||||||| || || | ||| | ||||| Sbjct 6403 AACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 6344 Query 162472 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 162530 ||||| || ||| | |||||| | |||||||| || || || || || || || ||||| Sbjct 6343 -TCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 6285 Query 162531 ACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATC 162590 ||| || |||| || | | || || ||||| || ||||| ||||| || |||| | Sbjct 6284 ACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTAC 6225 Query 162591 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 162650 ||| || || ||| | ||||| ||||| || |||||||| ||||| ||||||| || Sbjct 6224 TTCTGCGGCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATG 6165 Query 162651 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTCCACTTCCTGATCGGCATCTATGC 162710 | | || || |||||||||| | || | || | |||||| | | || | | Sbjct 6164 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTG 6105 Query 162711 CTACATGGGACGTGAATGGGAACTCTCTTACCGTCTTGGTATGCGTCCATGGATCTGC-G 162769 |||||||| ||||| |||||||| || |||||| |||||||| || ||||| ||| | Sbjct 6104 TTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGAT-TGCTG 6046 Query 162770 TAGCATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCCTGGTCTATCCTTTCGGTC 162829 | || || || || ||||||||||| || | || || ||| || | || || | |||| Sbjct 6045 TTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTC 5986 Query 162830 AAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTACATTCAACTACATGCTTG 162889 |||| || ||||| | ||||| | || || |||||| ||||||| ||| ||| Sbjct 5985 AAGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTG 5926 Query 162890 TCTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTG 162949 | ||||| || || |||||||| || ||||| || || |||||||| ||||| || |||| Sbjct 5925 TATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTG 5866 Query 162950 TCTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCC 163009 | || ||||| || || || ||||| ||||| ||||| ||||| || ||| | || Sbjct 5865 TATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCA 5806 Query 163010 GTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGA 163069 | || || || |||| ||| || || | |||||||| ||||||||||| ||||| | Sbjct 5805 GGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAA 5746 Query 163070 CATACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCAT 163129 | || || || || || || |||||||| || || || |||||||||||||||||| | Sbjct 5745 CTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTT 5686 Query 163130 TCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGT 163189 |||||||||| ||||| || || |||||| | ||||| ||||| ||| |||| || |||| Sbjct 5685 TCAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGT 5626 Query 163190 TCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGT 163249 | || || | || | || ||||| ||||| | || |||||||| ||||| || | Sbjct 5625 TTACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAAT 5566 Query 163250 CCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGACGTTCTGAACCGTGCAG 163309 | | ||||| |||| |||||||| | || ||||| || || | | ||||| || Sbjct 5565 CTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTA 5506 Query 163310 GTTTGGGTATGGAAGTTATGCACGAGCGCAATGCTCACAACTTCCCACTTGACCTGGC 163367 | ||||||||||||||||| || || |||||||| |||||||| || ||||| || Sbjct 5505 ACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 5448 >seq7678 Length=557 Score = 349 bits (386), Expect = 4e-91 Identities = 336/429 (78%), Gaps = 4/429 (1%) Strand=Plus/Minus Query 162978 GCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAA 163037 ||||||||| |||||||| || || | || ||||| || || ||||| || ||||| || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 163038 CTATGGTTACAAGTTCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTA 163097 ||| |||||||||||||| ||||||||||| || ||||||||||| || || || ||||| Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 163098 CTTCGGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTT 163157 ||| ||||| |||||||||||||| || || ||||||||| |||||| |||||||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373 Query 163158 CCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATG 163215 | | ||||||||||| || |||| |||||||| ||||| | || | ||| || ||| Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGG--TATCAGCACAATG 315 Query 163216 GCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTG 163275 || |||||||||||||| |||||||||||||| || | | ||| ||| ||||| || Sbjct 314 GCGTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTC 255 Query 163276 TTGAACACCTGGGCAGACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAG 163335 | || ||||| ||||| | ||||| || |||||||||||||| ||||||||| Sbjct 254 ATCGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAG 195 Query 163336 CGCAATGCTCACAACTTCCCACTTGACCTGGCAGCTGCCGAGTCAACTCCTGTTGCTCTT 163395 || || |||||||||||||| | ||| |||| |||| || ||||||| ||| | Sbjct 194 CGTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTA 135 Query 163396 ACCGCACCT 163404 || |||||| Sbjct 134 ACTGCACCT 126 >seq7307 Length=548 Score = 235 bits (260), Expect = 6e-57 Identities = 337/475 (71%), Gaps = 0/475 (0%) Strand=Plus/Plus Query 164165 TCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTGCTATTCACGGAG 164224 |||| ||||||||||| || ||| |||| || ||||| | | | ||| |||||||||| Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60 Query 164225 TCACAGTTGAAAATACATTGTATGAAGATGGAGAACAAGCAAACACCTTTAAGGCGTTTG 164284 |||||| ||||| || || | |||||| || ||| | | || ||||| || || Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCA 120 Query 164285 ATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGA 164344 | | || || | |||||| || || || ||||| || || ||||| |||||||| |||| Sbjct 121 ACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGA 180 Query 164345 TCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTG 164404 | |||||| | || || || ||||| |||||| | || || |||||| ||||||| || | Sbjct 181 TATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAG 240 Query 164405 TTATGGGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTCGTGCTT 164464 | | || | |||| | || | || || | || | || | || || || |||| Sbjct 241 TCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTT 300 Query 164465 ACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACTTTCTATA 164524 |||| || ||| ||||| | | ||||||||||| || || || || || ||||||| Sbjct 301 ACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATA 360 Query 164525 CCAAGAACATCTTATTGAACGAAGGACTCCGTGCATGGTTAGCACCAGTTGACCAGCCAG 164584 |||| ||||| || ||||||| || |||| || ||| | || || || ||||| Sbjct 361 CCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTC 420 Query 164585 GAGAACGGTTTGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAATGCGCTTTAATA 164639 |||| ||||| |||||||| || || || || | ||||| || || ||||| Sbjct 421 ACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAATA 475 >seq7318 Length=447 Score = 233 bits (258), Expect = 2e-56 Identities = 251/332 (76%), Gaps = 0/332 (0%) Strand=Plus/Plus Query 164002 AATGCGATTGCTTTCTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCT 164061 ||||| || || || |||||||| |||||||| || ||| ||| ||||| || || || Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 164062 CTGGGTCAATCAAGTTGGTTCTTCGCTCCATCTTTTGGAGTGGCAGCAATCTTCAGATTC 164121 |||||||| | ||||||| || || || |||||| || ||||| || || | ||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 164122 CTCTTATTCCTTCAAGGATTTCATAACTGGACTTTGAACCCCTTCCATATGATGGGAGTT 164181 || |||| ||||||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 164182 GCTGGTATACTAGGCGGAGCATTGCTATCTGCTATTCACGGAGTCACAGTTGAAAATACA 164241 || ||| || | |||| || |||||| |||||||| || | || || |||||||| Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 164242 TTGTATGAAGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCGACACAGGAAGAA 164301 || | ||||||||| || ||||| || || ||| ||| | | || || | ||| Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 164302 GAGACTTATTCTATGGTCACTGCAAACCGCTT 164333 || |||||||| ||||||||||| |||||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTT 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557521836353800