Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq8857 545 3e-150 seq7678 320 2e-82 seq7307 233 2e-56 seq7318 215 6e-51 >seq8857 Length=8770 Score = 545 bits (604), Expect = 3e-150 Identities = 703/977 (72%), Gaps = 2/977 (0%) Strand=Plus/Minus Query 167097 TGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCTGATGATCCCT 167156 ||| | ||||||||| | ||||| || || | || ||||| || ||| ||||||||||| Sbjct 6421 TGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 6362 Query 167157 ACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTCCTCCTGTGGA 167215 || || | | ||||| ||||| || ||||| |||||| | | ||||||||| || || Sbjct 6361 ACCTTATTGACCGCAACT-TCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGA 6303 Query 167216 CATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTC 167275 || |||||||| || ||||| ||| |||| || | | || || ||||| || ||||| Sbjct 6302 TATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATTATCTC 6243 Query 167276 TGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCATCTGGGAAGC 167335 ||||| || ||||| ||||| ||||| ||| | ||||| ||||| || |||||||| Sbjct 6242 CGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAATATGGGAAGC 6183 Query 167336 AGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAGTTTTCCACTT 167395 ||| | | || || ||||| |||||||||||||||| | || | ||| | ||||| Sbjct 6182 GGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTT 6123 Query 167396 CCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTAT 167455 | | | || | | || |||||||||||||||||||| || |||||| ||||| Sbjct 6122 CTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTAT 6063 Query 167456 GCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCT 167515 ||| || ||||| |||||| || || ||||| || || || || ||||||| ||| | Sbjct 6062 GCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTT 6003 Query 167516 CGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTAC 167575 | || || | |||||||| || ||||| | |||||||| || || |||||||| Sbjct 6002 GATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTAC 5943 Query 167576 ATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATAT 167635 ||||||| ||| |||| ||||| || || ||||||||||| |||||||| || || || Sbjct 5942 TTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACAT 5883 Query 167636 GCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGT 167695 | | || || ||||| ||||| || || || || || ||||| ||||| ||||| |||| Sbjct 5882 GTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGT 5823 Query 167696 TACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTT 167755 || ||| || | | ||||| || |||| ||| || || | |||||||| || Sbjct 5822 AACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATT 5763 Query 167756 CGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGAT 167815 |||||| || ||||| || ||||| || || |||||||||||||| || || || |||| Sbjct 5762 CGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGAT 5703 Query 167816 CTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCC 167875 ||||||||| ||| ||||||||||| || || | || |||||||| || || ||||| Sbjct 5702 CTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCC 5643 Query 167876 TGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACCTGAACGG 167935 ||| | ||||| |||| ||||| | || || Sbjct 5642 CGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGG 5583 Query 167936 TTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTACTTGGGCAGA 167995 |||||| ||||| || ||| | |||||||| ||| || | ||| || || || Sbjct 5582 TTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGA 5523 Query 167996 CGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTT 168055 | | ||||| ||| || ||||||||||||||||| || ||||||||||| ||||| Sbjct 5522 TATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTT 5463 Query 168056 CCCTCTCGACCTTGCTG 168072 |||||| ||||| |||| Sbjct 5462 CCCTCTAGACCTAGCTG 5446 >seq7678 Length=557 Score = 320 bits (354), Expect = 2e-82 Identities = 325/433 (75%), Gaps = 0/433 (0%) Strand=Plus/Minus Query 167681 GCACGGTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAA 167740 ||||||||| ||||||| || || |||| ||||||||||| ||||| || || || || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 167741 CTATGGTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTA 167800 ||| |||||||||||||| || |||||||| || || |||||||| ||||| || ||||| Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 167801 CTTCGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTT 167860 ||| ||||| |||||||||||||||| |||||||||||| ||| || ||||||||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373 Query 167861 CTTGGCAGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNN 167920 |||||| |||||||| || | |||||||||| Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313 Query 167921 ATTCAACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCT 167980 |||||||||||||| |||||||||||||| || | | ||| | ||| || | Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253 Query 167981 GCCTACTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCG 168040 |||||||||| ||||| ||||||| ||| ||||||||||||| ||||||||||| Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193 Query 168041 TAATGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGAGTCCACTCCTGTGGCACTCAC 168100 ||| |||||||||||||| | ||| | ||||||| ||| |||||||||| | || Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAAC 133 Query 168101 CGCACCTGCTATC 168113 |||||||| ||| Sbjct 132 TGCACCTGCAATC 120 >seq7307 Length=548 Score = 233 bits (258), Expect = 2e-56 Identities = 332/467 (71%), Gaps = 0/467 (0%) Strand=Plus/Plus Query 169029 CATATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTT 169088 || |||||||| ||||| ||| | | || ||||| | | | ||||||||| || | Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62 Query 169089 ACAGTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGAC 169148 |||||||| || || | | | |||| |||||| | | || || ||| || || || Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCAAC 122 Query 169149 AGCACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATC 169208 ||| || | ||| || ||||| || ||||| || || ||||| |||||||| ||||| Sbjct 123 TACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGATA 182 Query 169209 TTTGGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTT 169268 || ||||| || ||| || || ||||||| || ||||| ||||||||||| || || Sbjct 183 TTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAGTC 242 Query 169269 ATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTAT 169328 | || | |||| || | || || | ||| | || | ||||| || ||||| Sbjct 243 ACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTTAC 302 Query 169329 GACTTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACC 169388 ||||| || |||||||| | | ||||||||||| ||||| ||||| || ||||| ||| Sbjct 303 GACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATACC 362 Query 169389 AAGAACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCAT 169448 || ||||| | ||||||| ||| | || || ||| | || ||| ||||| ||||| Sbjct 363 AAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTCAC 422 Query 169449 GAGAACTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495 || | ||||| ||||| ||||| || || || || ||||| || || Sbjct 423 GAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCT 469 >seq7318 Length=447 Score = 215 bits (238), Expect = 6e-51 Identities = 254/341 (74%), Gaps = 2/341 (1%) Strand=Plus/Plus Query 168864 AATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCT 168923 ||||| || || || |||||||| || |||||||||||| || ||||| || || || Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 168924 CTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTC 168983 |||||||| | |||||||||| || || ||| || || |||| || || || ||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 168984 CTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATATGATGGGTGTA 169043 | || || | ||||| || ||||| ||||| |||| ||||||||||||||||| || Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 169044 GCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACT 169103 || ||| | ||||| | ||| |||| | || |||||||||| || ||||| |||||| Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 169104 CTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGCACTCAGGAAGAG 169163 | | | |||||||||| |||||||| ||| || ||| || ||||| | || Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 169164 GAGACCTATTCAATGGTTACTGCAAACCG-TTTCTGGTCTC 169203 || || ||||||||||| ||||| ||||| ||||| ||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCT-GTCTC 340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560545499215600