Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq8857 486 3e-132 seq7678 325 6e-84 >seq8857 Length=8770 Score = 486 bits (538), Expect = 3e-132 Identities = 686/964 (71%), Gaps = 0/964 (0%) Strand=Plus/Minus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 ||||| || || | ||| |||| ||||||||||| | ||||| ||| | | | | Sbjct 6409 ACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 6350 Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434 || || || || ||| |||| ||||| ||||| ||||| || ||||| || || || Sbjct 6349 GCAACTTCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATT 6290 Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494 | || || ||| |||| ||||| | || || ||||| || ||||| ||||| || | Sbjct 6289 CGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATT 6230 Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554 |||| ||| || ||||| || ||||| || || || |||||||| ||| | ||||| Sbjct 6229 CCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGAT 6170 Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614 |||||| | ||||||||||| |||| | || || | | |||||| | | ||| | Sbjct 6169 GAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTA 6110 Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674 || ||| || | |||||||||| || | | | |||||| | |||||||| Sbjct 6109 GCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATT 6050 Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734 |||||| || || || ||||| | ||||| ||| || ||| | | || ||| | Sbjct 6049 GCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATT 5990 Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794 ||||| || || ||||||| |||||| || || || ||||| || ||||||| ||| Sbjct 5989 GGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATG 5930 Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854 |||| ||||||||||| |||||||| || ||||||||||| |||||||||||||| ||| Sbjct 5929 ATTGTATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCT 5870 Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914 ||||| || ||||| || | || ||| ||||| ||||| | || || ||| | | Sbjct 5869 GGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTG 5810 Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974 ||||| || || || || | |||||| || | |||||||| ||||| |||||||| Sbjct 5809 ATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAA 5750 Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034 ||||| || || || |||||||| || ||||| ||||| || | ||||||||||| ||| Sbjct 5749 GAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCA 5690 Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094 |||||||||||| | | | || |||||| | || || | || ||||| |||| Sbjct 5689 AGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATT 5630 Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154 ||| ||||| | ||| | |||||||| ||||| | || |||||||| ||||| Sbjct 5629 TGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAAT 5570 Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGA 216214 || ||||| || || ||| || ||| ||| || || || | ||||| | Sbjct 5569 CAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGC 5510 Query 216215 GCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTG 216274 || |||||||||||||| ||||| || ||||| ||||| |||||||| ||||| | Sbjct 5509 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTA 5450 Query 216275 GCTG 216278 |||| Sbjct 5449 GCTG 5446 >seq7678 Length=557 Score = 325 bits (360), Expect = 6e-84 Identities = 333/431 (77%), Gaps = 8/431 (2%) Strand=Plus/Minus Query 215887 GCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAA 215946 ||||||||| | ||||| || || | | | || || || || ||||| || || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 215947 CTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTA 216006 |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 216007 CTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGT---CTTCACTT 216063 ||||||||| | |||||||||||||| || ||||||||| || || || ||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAAC---AGCCGTTCACTGCACTT 376 Query 216064 CTTCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTAT 216123 |||| | || |||| || || || |||||||| || || | ||| || || || Sbjct 375 CTTCTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAAT 316 Query 216124 GGCGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGT 216183 |||||||||||| ||||| |||||||||||||| || || | || | ||| || Sbjct 315 GGCGTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGT 256 Query 216184 TATTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACTT-GGTATGGAAGTAATGCACG 216242 || |||||||||| ||||| | ||| | || |||| ||||||||||| ||||||| Sbjct 255 CATCGCTACTTGGGCTGACGTAATCAACCGCGC-TAACTTGGGTATGGAAGTCATGCACG 197 Query 216243 AGCGTAACGCTCACAACTTCCCATTAGACTTGGCTGCTGCTGAATCAACACCAGTTGCTT 216302 |||||||||||||||||||||| |||||||||||||||| |||| | || || |||| Sbjct 196 AGCGTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTT 137 Query 216303 TAACTGCACCT 216313 ||||||||||| Sbjct 136 TAACTGCACCT 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 744998532715120