Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_015287.1
Length=232878
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 486 3e-132
seq7678 325 6e-84
>seq8857
Length=8770
Score = 486 bits (538), Expect = 3e-132
Identities = 686/964 (71%), Gaps = 0/964 (0%)
Strand=Plus/Minus
Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374
||||| || || | ||| |||| ||||||||||| | ||||| ||| | | | |
Sbjct 6409 ACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 6350
Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434
|| || || || ||| |||| ||||| ||||| ||||| || ||||| || || ||
Sbjct 6349 GCAACTTCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATT 6290
Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494
| || || ||| |||| ||||| | || || ||||| || ||||| ||||| || |
Sbjct 6289 CGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATT 6230
Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554
|||| ||| || ||||| || ||||| || || || |||||||| ||| | |||||
Sbjct 6229 CCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGAT 6170
Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614
|||||| | ||||||||||| |||| | || || | | |||||| | | ||| |
Sbjct 6169 GAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTA 6110
Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674
|| ||| || | |||||||||| || | | | |||||| | ||||||||
Sbjct 6109 GCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATT 6050
Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734
|||||| || || || ||||| | ||||| ||| || ||| | | || ||| |
Sbjct 6049 GCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATT 5990
Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794
||||| || || ||||||| |||||| || || || ||||| || ||||||| |||
Sbjct 5989 GGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATG 5930
Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854
|||| ||||||||||| |||||||| || ||||||||||| |||||||||||||| |||
Sbjct 5929 ATTGTATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCT 5870
Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914
||||| || ||||| || | || ||| ||||| ||||| | || || ||| | |
Sbjct 5869 GGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTG 5810
Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974
||||| || || || || | |||||| || | |||||||| ||||| ||||||||
Sbjct 5809 ATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAA 5750
Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034
||||| || || || |||||||| || ||||| ||||| || | ||||||||||| |||
Sbjct 5749 GAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCA 5690
Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094
|||||||||||| | | | || |||||| | || || | || ||||| ||||
Sbjct 5689 AGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATT 5630
Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154
||| ||||| | ||| | |||||||| ||||| | || |||||||| |||||
Sbjct 5629 TGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAAT 5570
Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGA 216214
|| ||||| || || ||| || ||| ||| || || || | ||||| |
Sbjct 5569 CAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGC 5510
Query 216215 GCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTG 216274
|| |||||||||||||| ||||| || ||||| ||||| |||||||| ||||| |
Sbjct 5509 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTA 5450
Query 216275 GCTG 216278
||||
Sbjct 5449 GCTG 5446
>seq7678
Length=557
Score = 325 bits (360), Expect = 6e-84
Identities = 333/431 (77%), Gaps = 8/431 (2%)
Strand=Plus/Minus
Query 215887 GCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAA 215946
||||||||| | ||||| || || | | | || || || || ||||| || ||
Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493
Query 215947 CTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTA 216006
|||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||
Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433
Query 216007 CTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGT---CTTCACTT 216063
||||||||| | |||||||||||||| || ||||||||| || || || |||||
Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAAC---AGCCGTTCACTGCACTT 376
Query 216064 CTTCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTAT 216123
|||| | || |||| || || || |||||||| || || | ||| || || ||
Sbjct 375 CTTCTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAAT 316
Query 216124 GGCGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGT 216183
|||||||||||| ||||| |||||||||||||| || || | || | ||| ||
Sbjct 315 GGCGTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGT 256
Query 216184 TATTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACTT-GGTATGGAAGTAATGCACG 216242
|| |||||||||| ||||| | ||| | || |||| ||||||||||| |||||||
Sbjct 255 CATCGCTACTTGGGCTGACGTAATCAACCGCGC-TAACTTGGGTATGGAAGTCATGCACG 197
Query 216243 AGCGTAACGCTCACAACTTCCCATTAGACTTGGCTGCTGCTGAATCAACACCAGTTGCTT 216302
|||||||||||||||||||||| |||||||||||||||| |||| | || || ||||
Sbjct 196 AGCGTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTT 137
Query 216303 TAACTGCACCT 216313
|||||||||||
Sbjct 136 TAACTGCACCT 126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 744998532715120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |