Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq8857 556 2e-153 seq7678 336 3e-87 seq7307 242 5e-59 seq7318 237 2e-57 >seq8857 Length=8770 Score = 556 bits (616), Expect = 2e-153 Identities = 695/947 (73%), Gaps = 8/947 (1%) Strand=Plus/Minus Query 181836 GGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCGGCAACCATCTGT-TTCATCGT 181894 || ||||||||||| |||||||||| || | ||| | ||||| ||||| || ||| | Sbjct 6388 GGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATCAT 6330 Query 181895 TGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTATCCGCGAACCCGTAGCTGGTTC 181954 || ||| | || || ||||| || ||||| || ||||| || ||||| || |||| || Sbjct 6329 AGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 6270 Query 181955 ACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCATCCTCCAACGCAATTGG 182014 | | || || ||||| || ||||| ||||| || | || | || || || || Sbjct 6269 TTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGG 6210 Query 182015 TCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGATGAGTGGCTGTATAACGGTGG 182074 | | ||||| || ||||| |||||||| || || ||||||| ||| | || || ||||| Sbjct 6209 TTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGG 6150 Query 182075 TCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCATCTACGCCT---ACATGGGACG 182131 ||||| | || ||||| | |||||| | | || | || || | ||||||| || Sbjct 6149 TCCTTATGAGCTAATTGTTCTACACTTCTTACTAGG--TGTA-GCTTGTTACATGGGTCG 6093 Query 182132 TGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGC 182191 |||||||||||| || ||| | |||||||| || ||||| ||| || || || || Sbjct 6092 TGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGC 6033 Query 182192 TCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCCTTTCGGTCAAGGTTCGTTCTC 182251 ||| || || || || ||||||| ||||| | || || | |||||||| || || Sbjct 6032 TCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTC 5973 Query 182252 CGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTATATGTTGGTTTTCCAAGCTGA 182311 |||| ||||| || || || || || || ||||||| |||| | || ||||| ||||| Sbjct 5972 TGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGA 5913 Query 182312 GCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGGTGTATTCGGTGGTTC 182371 |||||||| |||||||| || || |||||||| |||||||| |||||||| ||||| || Sbjct 5912 ACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTC 5853 Query 182372 ACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGA 182431 || |||||||| ||||| ||||| ||||| || ||| | || | || || || || Sbjct 5852 CCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGA 5793 Query 182432 GCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGT 182491 | || || || | |||||||| ||||||||||| ||||| || ||||| || || Sbjct 5792 AAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGT 5733 Query 182492 TGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCG 182551 || || ||||| || || || || |||||||||||||| ||| ||||||||||| || Sbjct 5732 AGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCG 5673 Query 182552 TTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTGGTTCACCGCACTTGG 182611 ||| || || |||||| | ||||| ||||| ||| | || || ||||| || || | || Sbjct 5672 TTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGG 5613 Query 182612 TGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGG 182671 | | || ||||| ||||| | || |||||||| ||||| || || | ||||| | Sbjct 5612 TATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAG 5553 Query 182672 TCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGA 182731 ||| |||||||| |||| || || || ||| | | ||||| ||| ||||||||||| Sbjct 5552 TCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGA 5493 Query 182732 AGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGATCTTGCTG 182778 |||||||||||| ||||| || || |||||||| ||||| || |||| Sbjct 5492 AGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTG 5446 >seq7678 Length=557 Score = 336 bits (372), Expect = 3e-87 Identities = 314/399 (79%), Gaps = 0/399 (0%) Strand=Plus/Minus Query 182387 GCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAGCAAGAGTCACAGAA 182446 ||||||||| |||||||| || || | || ||||| || || || || ||||| || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 182447 CTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTA 182506 ||| |||||||||||||| ||||||||||| ||||| |||||||| || || || || || Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 182507 CTTCGGTCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTT 182566 ||| ||||| ||||||||||||||||| || ||||||||| |||||| |||||||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373 Query 182567 CCTTGCTGCATGGCCTGTTGTTGGAATCTGGTTCACCGCACTTGGTGTCTCCACGATGGC 182626 | | ||||||||||| || | || |||||||| ||||| | ||| || ||| ||||| Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313 Query 182627 ATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCT 182686 |||||||| ||||| |||||||||||||| || | | ||| ||| ||||| ||| | Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253 Query 182687 TAACACTTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCG 182746 |||||||| || ||| | ||||| ||| | ||||||||||| ||||| ||||| Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193 Query 182747 TAACGCACACAACTTCCCACTAGATCTTGCTGCTGCTGA 182785 |||||| ||||||||||| |||| | ||||||| ||| Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGA 154 >seq7307 Length=548 Score = 242 bits (268), Expect = 5e-59 Identities = 335/469 (71%), Gaps = 0/469 (0%) Strand=Plus/Plus Query 183725 TCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTG 183784 |||| ||||||||||| || ||| |||| || ||||| ||| | |||| || || || | Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60 Query 183785 TCACAGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTG 183844 ||||||||| || || || | |||||| || ||| | | || || ||| || || Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCA 120 Query 183845 ATTCCACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAA 183904 | | ||| |||| |||||| || || || ||||| |||||||| || ||||||||||| | Sbjct 121 ACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGA 180 Query 183905 TCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTG 183964 | ||||| | || || ||| || || ||||| |||||||| ||| ||||||| || | Sbjct 181 TATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAG 240 Query 183965 TCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTT 184024 ||| || | ||| | | || | || ||| | || | || | || || || |||| Sbjct 241 TCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTT 300 Query 184025 ATGATTTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACA 184084 | || || ||| ||||| | | ||||||||||| ||||||||||| || ||||| | Sbjct 301 ACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATA 360 Query 184085 CAAAGAACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCAC 184144 | || ||||| | || || || || | || || ||| | || ||| ||||| || | Sbjct 361 CCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTC 420 Query 184145 ATGAGAATTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCT 184193 | || | ||| |||| ||||||||||| ||||| | || || ||||| Sbjct 421 ACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCT 469 >seq7318 Length=447 Score = 237 bits (262), Expect = 2e-57 Identities = 255/336 (76%), Gaps = 1/336 (0%) Strand=Plus/Plus Query 183562 AATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTTATCTATCCA 183621 ||||| || || || |||||||| |||||||||||||| |||||| || || |||||| Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 183622 CTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTC 183681 ||||||||| || ||||| ||||| |||||||| || |||||||| || ||| | ||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 183682 CTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCATATGATGGGAGTT 183741 | | || |||| || || || || ||||| || ||||| || ||||||||||||||| Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 183742 GCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACAGTAGAGAATACA 183801 || ||| || | || | || || || | ||||| ||||||| || ||||| ||||| Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 183802 TTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCCACTCAAGAAGAA 183861 || | ||||||||| || ||||| |||||| ||| ||| | | ||||||| ||| Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 183862 GAGACGTATTCTATGGTTACAGCGAATCG-TTTCTG 183896 || || ||||| ||||| || || || || |||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCTG 336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611627803542200