Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq8857 596 2e-165 seq7678 352 3e-92 seq7307 295 8e-75 seq7318 230 3e-55 >seq8857 Length=8770 Score = 596 bits (660), Expect = 2e-165 Identities = 709/959 (74%), Gaps = 2/959 (0%) Strand=Plus/Minus Query 164791 AACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGCCGCTACA 164850 ||||| ||||| | || ||||| |||||| | |||||||| || | |||| || Sbjct 6403 AACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 6344 Query 164851 ATTTGT-TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTATTCGTGA 164909 | ||| ||||| | || ||||| |||||||| || || || ||||||||||||||||| Sbjct 6343 -TCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 6285 Query 164910 ACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCGTC 164969 |||||| | || ||| | | ||||| ||||| || ||||| ||||| | |||| | Sbjct 6284 ACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTAC 6225 Query 164970 TTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGGATGAATG 165029 |||| || ||||| | ||||| ||||| || |||||||| ||| | | |||||||| Sbjct 6224 TTCTGCGGCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATG 6165 Query 165030 GTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTGTAGCTTG 165089 ||| ||||| ||||||||||| || | |||| | |||||| | | ||||||||||| Sbjct 6164 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTG 6105 Query 165090 CTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGT 165149 |||||||||||||||||||||||| || ||| || |||||||| ||||||||| || Sbjct 6104 TTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 6045 Query 165150 AGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCTTTCGGTCA 165209 || ||| || ||||| || |||||| | || |||||| || | || || | ||||| Sbjct 6044 TGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCA 5985 Query 165210 AGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGT 165269 ||| || || ||||||||||||||||| || || ||||||||||| |||| |||| | || Sbjct 5984 AGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGT 5925 Query 165270 CTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGT 165329 ||||| || ||||| ||||| |||||||| || || |||||| | || || ||||| || Sbjct 5924 ATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 5865 Query 165330 ATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCACTCGTCCG 165389 ||| ||||| || || || |||||||||||| | || ||||| | || | Sbjct 5864 ATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAG 5805 Query 165390 CGAGACAACTGAAACAGAGAGTCAGAACTACGGTTATAAGTTTGGACAAGAAGAAGAGAC 165449 || || || |||| || | || | ||||| || || || ||||| ||||| || Sbjct 5804 GGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAAC 5745 Query 165450 CTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTCCAATACGCATCCTT 165509 ||||| || || ||||| || || || || || || | || |||||||| ||| || Sbjct 5744 TTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTT 5685 Query 165510 CAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGTATCTGGTT 165569 |||||| || ||||| | || |||||| | || || ||||| || | ||||| ||||| Sbjct 5684 CAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTT 5625 Query 165570 CACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTC 165629 |||||| | ||| |||| || ||||| ||||| | || |||||||| ||||| || || Sbjct 5624 TACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATC 5565 Query 165630 TATTGTTGATAGTCAGAACAAAATCATCCCTACTTGGGCTGACGTTCTGAACCGTGCTGG 165689 | | ||||||||||| | || ||| || ||||| | | ||||| ||| Sbjct 5564 TGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTAA 5505 Query 165690 TCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCACAACTTCCCCCTCGACCTCGCTG 165748 || |||||||||||||||||||| ||||| ||||| |||||||| || ||||| |||| Sbjct 5504 CCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTG 5446 >seq7678 Length=557 Score = 352 bits (390), Expect = 3e-92 Identities = 330/420 (79%), Gaps = 0/420 (0%) Strand=Plus/Minus Query 165370 GTTACTTCCTCACTCGTCCGCGAGACAACTGAAACAGAGAGTCAGAACTACGGTTATAAG 165429 ||||||||||| | || || || || || ||||| || || ||||||||||| ||| Sbjct 539 GTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTACAAG 480 Query 165430 TTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTC 165489 || |||||||||||||| ||||| |||||||| ||||| ||||| ||||| ||||| | Sbjct 479 TTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCGGTTG 420 Query 165490 ATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGG 165549 || ||||||||||| ||||||||||| |||||| |||||||||||| | || |||||| Sbjct 419 ATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTTCTTGGCTGCATGG 360 Query 165550 CCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAAC 165609 || ||| | ||||||||||| || ||| | ||| | ||||| ||||| |||||||||||| Sbjct 359 CCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGCGTTCAACCTGAAC 300 Query 165610 GGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTACTTGGGCT 165669 || |||||||||||||| || | | ||| ||| ||||| ||||||||||| Sbjct 299 GGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCATCGCTACTTGGGCT 240 Query 165670 GACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCACAAC 165729 ||||| | ||||| ||| ||||||||||||| ||||| |||||||||||||||||| Sbjct 239 GACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCGTAACGCTCACAAC 180 Query 165730 TTCCCCCTCGACCTCGCTGCTGCCGAGAGCACTCCTGTTGCTCTGACGGCACCCGCCATC 165789 |||||| | ||| | ||||||| || ||||||| ||| | || ||||| || ||| Sbjct 179 TTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAACTGCACCTGCAATC 120 >seq7307 Length=548 Score = 295 bits (326), Expect = 8e-75 Identities = 350/472 (74%), Gaps = 2/472 (0%) Strand=Plus/Plus Query 166707 CATATGATGGGTGTAGCAGGTATTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTT 166766 || |||||||| ||||| ||| | |||||||| || | | | |||||| || || | Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62 Query 166767 ACAGTAGAGAACACTCTGTATCAAGATGGTGAA-CAGGCAAATACTTTCAAGGCATTCGA 166825 |||||||| ||||| | | | |||| |||||| || |||| || ||| || ||| | Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAA-ACCTTCCGCGCCTTCAA 121 Query 166826 CTCTACTCAAGAGGAAGAAACCTATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGAT 166885 || || |||| ||||||||||| || ||||| ||||| ||||| | ||||| ||||| Sbjct 122 CTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGAT 181 Query 166886 CTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGT 166945 |||||||| || || || || ||||||| || ||||| ||||||||||| || || Sbjct 182 ATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAGT 241 Query 166946 TATGGGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTA 167005 | || |||||| || | || || | ||| | || | ||||| || ||||| Sbjct 242 CACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTTA 301 Query 167006 TGACTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATAC 167065 ||||| || ||||||||| | |||||||||| || || || |||||||| |||||||| Sbjct 302 CGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATAC 361 Query 167066 CAAGAACATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGCAACTATCGATCAACCTCA 167125 ||| |||||| | |||| |||||||| || |||||||||| || ||||| ||||| Sbjct 362 CAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTCA 421 Query 167126 TGAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 || || |||||||| || |||||||| ||| | ||||||||||||||| Sbjct 422 CGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAA 473 >seq7318 Length=447 Score = 230 bits (254), Expect = 3e-55 Identities = 255/340 (75%), Gaps = 0/340 (0%) Strand=Plus/Plus Query 166542 AATGCAATCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCT 166601 ||||||||||| ||||||||||| |||||||| || ||| ||| ||||| || || || Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 166602 CTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTC 166661 |||||||| | |||||||||| || || ||| || || |||| || || || ||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 166662 CTCCTTTTCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTA 166721 |||| || ||||||| || || || ||||| |||||||||||||||||||||| || Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 166722 GCAGGTATTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACT 166781 || ||| | | || | || |||| | || || ||||||| || ||||| || ||| Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 166782 CTGTATCAAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAA 166841 | | | |||||||||| |||||||| ||| ||| || || | ||||||| ||| Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 166842 GAAACCTATTCAATGGTTACAGCAAACCGCTATTGGTCTC 166881 ||||| ||||||||||| || || ||||||| | ||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCTGTCTC 340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563597958866560