Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_015290.1
Length=182180
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 489 2e-133
seq7678 257 2e-63
seq5828 111 2e-19
>seq8857
Length=8770
Score = 489 bits (542), Expect = 2e-133
Identities = 690/969 (71%), Gaps = 0/969 (0%)
Strand=Plus/Minus
Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758
||| |||| ||||| | |||||| | || |||| ||||| ||||| |||||||||||
Sbjct 6421 TGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 6362
Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818
|||| | ||| | | |||||| | || ||||| || ||||| || || ||
Sbjct 6361 ACCTTATTGACCGCAACTTCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGAT 6302
Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878
|| ||||| || | |||||||| | || || || | || || ||||| || |||||
Sbjct 6301 ATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATTATCTCC 6242
Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938
||||| || |||| |||| || |||||| | ||||| ||||| || ||||||||
Sbjct 6241 GGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAATATGGGAAGCG 6182
Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998
||| || | ||||| ||||| || || |||||||||||| | || || | | ||||||
Sbjct 6181 GCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTC 6122
Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058
| | || | || ||||||||| | |||||||||| | |||| | ||||||
Sbjct 6121 TTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATG 6062
Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118
|| |||||||| ||| || ||||| ||||| || |||| || ||||| |||||
Sbjct 6061 CGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTG 6002
Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178
| || || | ||||| ||| || || || || ||||||||||| || || |||||
Sbjct 6001 ATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACT 5942
Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238
|| ||||| ||| | |||||||| || || |||||||| |||||||||||||| || |||
Sbjct 5941 TTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATG 5882
Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298
||| || |||||| | || || || | || || || ||||| ||||| | |||
Sbjct 5881 TTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTA 5822
Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358
|| ||| | | ||||| || || ||||| || || || || | || |||||||||
Sbjct 5821 ACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTC 5762
Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418
|| ||||| |||||||| || || ||||| || || ||||| || ||||| || | |||
Sbjct 5761 GGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATC 5702
Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478
||||||||||| || || ||||| |||| | | || |||||| | ||| | | ||
Sbjct 5701 TTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCC 5642
Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538
|| | | || ||||| ||| | | |||||| | || ||||| || || | |||||
Sbjct 5641 GTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGT 5582
Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598
|| || ||||| || || | || ||| | ||| ||| || ||| || || ||
Sbjct 5581 TTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGAT 5522
Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658
| ||||| | || ||||| ||||||||||| |||||||| |||||||| || ||||||
Sbjct 5521 ATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTC 5462
Query 170659 CCACTTGAC 170667
|| || |||
Sbjct 5461 CCTCTAGAC 5453
>seq7678
Length=557
Score = 257 bits (284), Expect = 2e-63
Identities = 299/402 (74%), Gaps = 6/402 (1%)
Strand=Plus/Minus
Query 170283 GCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAA 170342
||||||||| | || || || || | | | || || ||||| | ||| ||||| ||
Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493
Query 170343 CTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATA 170402
||| || ||||| |||||||||||||||||||| |||||||| || || ||||| || ||
Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433
Query 170403 CTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTT 170462
||||||| | | ||||||||||| ||| ||| ||||| || ||| || ||||||||
Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373
Query 170463 CCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGC 170522
| | ||| ||| || ||| | | |||||||| || | | ||||| ||||||||||
Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313
Query 170523 ATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGATCT---GGTAAAGT 170579
|| ||||| || ||||| ||||||||||| ||| | | ||| ||| ||| ||
Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGAT---TCTCAAGGTCGCGT 256
Query 170580 AGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGA 170639
| |||| ||||| ||||| | ||| | || ||| | ||||||||||| ||||| ||
Sbjct 255 CATCGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGA 196
Query 170640 GCGTAATGCACACAACTTCCCACTTGACTTGGCAACTGCTGA 170681
|||||| || ||||||||||| | |||||||| ||| |||
Sbjct 195 GCGTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGA 154
>seq5828
Length=68329
Score = 111 bits (122), Expect = 2e-19
Identities = 178/251 (71%), Gaps = 15/251 (6%)
Strand=Plus/Plus
Query 150979 CCAGAAATTCTTGATGGAAGAGTAAAGACTTTACATCCAAAGATTCATGGTGGTATTCTT 151038
|||||||| | | || ||||| || ||||||||||| ||||||||||||| |||
Sbjct 64197 CCAGAAATGTTGGGAGGTAGAGTGAAAACTTTACATCCTGCCGTTCATGGTGGTATCCTT 64256
Query 151039 GCACAACGAGGTAATTC--TAGTCATGATTTAGATCTTAAGGTAAATCGTATTGAAC--- 151093
|| ||| | || ||| |||| ||| | |||| | | | ||||||
Sbjct 64257 GCT-----AGGGACATCGATAGCGATGAGAAAGACTTGAAGGAACAGCACATTGAAAAAG 64311
Query 151094 -CGATTGATATTGTTGCTGTAAACCTATATCCATTTAAAGAAACTGTTGCTAAACCAGGT 151152
||||| || | ||| ||||| |||||| ||||| ||||||||||||||||| |||
Sbjct 64312 TCGATT-ATGTCGTT--TGTAA-CCTATACCCATTCAAAGAAACTGTTGCTAAGGTGGGT 64367
Query 151153 GTAACTCTTGCAGAAGCAATTGAGAATATTGACATTGGTGGTCCTAGTATGGTAAGATCA 151212
|||||| || ||||||| | || | ||||| ||||||||| || | | ||||| ||
Sbjct 64368 GTAACTATTCCAGAAGCCGTAGAAGAAATTGATATTGGTGGTGTTACTCTATTAAGAGCA 64427
Query 151213 GCAGCAAAGAA 151223
|| || |||||
Sbjct 64428 GCTGCTAAGAA 64438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582783019733600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |