Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq8857 639 2e-178 seq7678 286 4e-72 >seq8857 Length=8770 Score = 639 bits (708), Expect = 2e-178 Identities = 727/973 (75%), Gaps = 2/973 (0%) Strand=Plus/Plus Query 83985 GGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGT 84044 ||||||||||| || |||||||| ||||| |||||||||||||| || || |||| Sbjct 5460 GGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCGCGGTTAATG 5519 Query 84045 ACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTA 84104 | ||| || |||||||| | ||||| ||| ||||| || | | |||||||| || Sbjct 5520 ATATCAGCTCAGGTATTAATTACACGACCTTGACTATCAACTACAGATTGATTGAAATTG 5579 Query 84105 AATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACC 84164 || ||||| | ||| || ||||| || |||| ||| | ||||| ||||||||| || | Sbjct 5580 AAACCATTTAAATTGAAAGCCATAGTACTAATACCTAAAGCAGTAAACCAAATACCGATA 5639 Query 84165 ACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGG 84224 || ||||||||||| ||||| || || | ||||||| |||||||| ||||| ||| Sbjct 5640 ACGGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTGAAACTTGCATATTGG 5699 Query 84225 AAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGA 84284 ||||| | || || || || || |||||||| ||||||||||||||||| || |||||| Sbjct 5700 AAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAGTTTCTTCCTCTTGA 5759 Query 84285 CCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAA 84344 ||||| |||||||| | || || |||||||||||||||| | ||| | | |||| Sbjct 5760 CCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCCTGATCAAACTAGAA 5819 Query 84345 GTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCC 84404 || || | ||||||||||| ||| ||||| | ||||| ||||||||||| || || Sbjct 5820 GTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCACCAAATACACCAGCTACACCT 5879 Query 84405 AACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTG 84464 ||||||||||| || |||||||||||||| ||||| |||||||| |||| ||| ||||| Sbjct 5880 AACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAATACAATCATAAAGTTG 5939 Query 84465 AACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATAC 84524 || || || || || || || ||||| |||||||| || ||||| || | || || Sbjct 5940 AAAGTACCAGAAATGCCTAGAGGCATACCATCAGAAAAGCTTCCTTGACCAATTGGGTAA 5999 Query 84525 ACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGA 84584 | | ||| ||||||| || |||||||| ||||| || || |||||| ||||| || Sbjct 6000 ATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATACGCAACAGCAATCCAAGGG 6059 Query 84585 CGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAAATGCACCAATC 84644 |||||||| ||||| | |||||||| ||||||||||||||| | | |||| | Sbjct 6060 CGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATGTAACAAGCTACACCTAGT 6119 Query 84645 AGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTT 84704 | |||||| | |||| || | |||||| |||||||| |||| |||||| || | | | Sbjct 6120 AAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCATTCATCAACAGAT 6179 Query 84705 GCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCA 84764 || |||||||| || ||||| || || | ||| ||||| ||| | |||| | |||| Sbjct 6180 GCCGCTTCCCATATTGGATAAAAGTGCAAACCGATAGCCGCAGAAGTAGGAATAATGGCA 6239 Query 84765 CCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCA 84824 || || || || ||||||||||| | | ||| |||| || || ||||| ||||| ||| Sbjct 6240 CCGGAGATAATATTGTTTCCGTAAAGCAAAGATCCAGAAACAGGTTCACGAATACCATCA 6299 Query 84825 ATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGTGGCAGCAAGTAG 84883 ||||| ||||| || ||| ||| ||| || ||||| || ||||| ||| || | | || Sbjct 6300 ATATCTACTGGAGGAGCAGCAATGAAGGCTATGATAAATACAGA-AGTTGCGGTCAATAA 6358 Query 84884 AGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTTGTTAGTGGAGGTGAC 84943 || || ||||| | | |||||||| |||| || | ||||| | |||| ||| | Sbjct 6359 GGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGGCGGTTTTCAGTGCTGGTTAT 6418 Query 84944 CCAATCACAGAAG 84956 ||| | ||||||| Sbjct 6419 CCAGTTACAGAAG 6431 >seq7678 Length=557 Score = 286 bits (316), Expect = 4e-72 Identities = 323/433 (75%), Gaps = 0/433 (0%) Strand=Plus/Plus Query 83930 GATGGTAGGTGCAGTTAGTGCTACAGGAGTAACAGAAACTGACGCAAGATCCAACGGGAA 83989 ||| | ||||||||||| || ||||||| ||| | | | || | || || ||||| Sbjct 120 GATTGCAGGTGCAGTTAAAGCCACAGGAGCAACTTCACCAGCAGCCAAGTCTAAGGGGAA 179 Query 83990 GTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGTACATC 84049 ||| || |||||||| |||||||| ||||||||||| | || || || | ||| || Sbjct 180 GTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAAGTTAGCGCGGTTGATTACGTC 239 Query 84050 GGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTAAATCC 84109 ||||| ||| || || || ||| ||||| | || |||||||| ||||| Sbjct 240 AGCCCAAGTAGCGATGACGCGACCTTGAGAATCGATTACTGATTGGTTGAAGTTGAATCC 299 Query 84110 ATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACCACTGG 84169 ||||| || || ||||| ||||| | ||| | ||| | |||||| || || | ||||| Sbjct 300 GTTCAGGTTGAACGCCATTGTGCTGATACCTAAAGCGGTAAACCAGATACCGATTACTGG 359 Query 84170 CCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGGAAGAT 84229 ||| ||||||||||| ||||| || ||||| || |||||||||||||| || |||||||| Sbjct 360 CCATGCAGCCAAGAAGAAGTGCAGTGAACGGCTGTTGTTGAAGGAAGCGTATTGGAAGAT 419 Query 84230 AAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGACCGAA 84289 | ||||| ||||| ||||| ||||| || || || || ||||| |||||||| ||||| Sbjct 420 CAACCGACCAAAGTAACCGTGTGCAGCTACGATGTTGTAGGTTTCTTCTTCTTGTCCGAA 479 Query 84290 CTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAAGTGAC 84349 ||||||||| ||||||||||| | ||||||| ||||| || | | || ||||| || Sbjct 480 CTTGTAACCGTAGTTTTGTGATTCGGTTTCTGTGGTTTCACGTACCAAGGAGGAAGTAAC 539 Query 84350 AAGTGAACCATGC 84362 | ||||| ||| Sbjct 540 CAAGGAACCGTGC 552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571209910134520