Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_016656.1
Length=45890
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 473 4e-129
seq7678 215 2e-51
>seq8857
Length=8770
Score = 473 bits (524), Expect = 4e-129
Identities = 699/985 (71%), Gaps = 4/985 (0%)
Strand=Plus/Minus
Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861
|| ||| | ||| | || || ||||| ||||| || || | |||||||| || || |
Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371
Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920
||||| || |||| | | || ||| | ||| ||||| | |||||||| || || ||
Sbjct 6370 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATCATAGCCTTCATTGCTGCTCC 6312
Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980
|| |||||||| ||||| || ||||| || ||||| || || || | |||||||||||
Sbjct 6311 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAA 6252
Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040
||| || || || || | | || | ||| || ||||| | || ||||| || ||
Sbjct 6251 TATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAAT 6192
Query 26041 CTGGGAAGCTGGCA-CACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTA 26099
|||||||| |||| | | || || ||| |||||||||| || || ||| | || |||
Sbjct 6191 ATGGGAAGC-GGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTG 6133
Query 26100 TCTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACA 26159
| | ||||||||| |||| ||||| || || | |||||||||| || |
Sbjct 6132 TTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCC 6073
Query 26160 GACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCG 26219
| || || ||| | || ||||| |||||| ||| |||| || | | || ||| |
Sbjct 6072 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTG 6013
Query 26220 CAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTA 26279
| || ||||| |||| || | || ||||| || ||| |||||| |||||||| || |
Sbjct 6012 CTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCA 5953
Query 26280 TCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACC 26339
| ||||||||||| ||||||||| | |||||||| || ||||| || || || |||||||
Sbjct 5952 TTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACC 5893
Query 26340 CATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACG 26399
|||| || ||| ||||| ||||| || || ||||| | || || ||||||||| |
Sbjct 5892 CATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATG 5833
Query 26400 GAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATG 26459
| ||||| ||||| | || ||||| ||||| | | || ||| | |
Sbjct 5832 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAG 5773
Query 26460 GCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTG 26519
| || || || || ||||| ||||| || ||||||||||| ||||| || || || ||||
Sbjct 5772 GTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTG 5713
Query 26520 GGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTG 26579
| |||| || || || ||||| ||||| || ||| |||||| | |||||||| | |
Sbjct 5712 GCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAG 5653
Query 26580 CTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTA 26639
|| ||||||| ||| | || || ||| | || || | ||||| | || ||||| || |
Sbjct 5652 CTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 5593
Query 26640 ACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTA 26699
| |||||||||| || || || || || ||||| ||| | | || |||| ||
Sbjct 5592 ATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 5533
Query 26700 CATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATG 26759
| || |||||| | | ||||| |||||||| || | ||||||||||| || |||||||
Sbjct 5532 CCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 5473
Query 26760 CTCATAACTTTCCACTTGACTTAGC 26784
|||||||||| || || ||| ||||
Sbjct 5472 CTCATAACTTCCCTCTAGACCTAGC 5448
>seq7678
Length=557
Score = 215 bits (238), Expect = 2e-51
Identities = 278/381 (73%), Gaps = 2/381 (1%)
Strand=Plus/Minus
Query 26405 TTGGTTACTTCCTCACTTATTGCA-GAAACGACAGAGGAAGTCTCACAGAATTATGGCTA 26463
|||||||||||||| ||| | | ||||| ||||| | ||||| || || || ||
Sbjct 542 TTGGTTACTTCCTC-CTTGGTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTA 484
Query 26464 TAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAG 26523
||||| || ||||| ||||| || || || || || ||||||||||| |||||||| |
Sbjct 483 CAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCG 424
Query 26524 ATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTAC 26583
|| || || || || || || || ||||||||||| || || ||||| | ||| |
Sbjct 423 GTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTTCTTGGCTGC 364
Query 26584 TTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCT 26643
||||| || | || || ||| | || || | |||||| |||||||||| || |||||
Sbjct 363 ATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGCGTTCAACCT 304
Query 26644 AAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTACATG 26703
|| || || ||||| ||||| |||||| | ||| | | || | || |||| ||
Sbjct 303 GAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCATCGCTACTTG 244
Query 26704 GGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCA 26763
|||||| ||| | ||||| |||||| | || | ||||| |||||||||||||| |||||
Sbjct 243 GGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCGTAACGCTCA 184
Query 26764 TAACTTTCCACTTGACTTAGC 26784
||||| || | ||||| ||
Sbjct 183 CAACTTCCCCTTAGACTTGGC 163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146710859748456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |