Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq8857 538 1e-148 seq7678 232 2e-56 >seq8857 Length=8770 Score = 538 bits (596), Expect = 1e-148 Identities = 709/983 (72%), Gaps = 0/983 (0%) Strand=Plus/Plus Query 35973 GCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTCG 36032 |||||||| || |||||||| || || ||||| ||||||||||||||||| || | || Sbjct 5448 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 5507 Query 36033 GCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGAC 36092 || ||||||| || ||||| || || | || | || | |||||| || || Sbjct 5508 GCGCGGTTAATGATATCAGCTCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 5567 Query 36093 TGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAGC 36152 |||||||| || || || || | ||| ||||||||||| | || | ||| |||| | Sbjct 5568 TGATTGAAATTGAAACCATTTAAATTGAAAGCCATAGTACTAATACCTAAAGCAGTAAAC 5627 Query 36153 CATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAAG 36212 || || | | |||||||||||||| | ||||||||||||| || || || || Sbjct 5628 CAAATACCGATAACGGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTGAAA 5687 Query 36213 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTC 36272 || ||||| |||||||| | || ||||| || |||||||| || ||||| ||||| || Sbjct 5688 CTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAGTT 5747 Query 36273 TCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACGA 36332 ||||| ||||| |||||||| || || | || ||||||| | || ||||| | Sbjct 5748 TCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCCTG 5807 Query 36333 ATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACC 36392 || | ||||| || | || ||||||||| |||| | ||||| ||||| Sbjct 5808 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCACCAAATACA 5867 Query 36393 CCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGACA 36452 || || ||||| | ||| || || || ||||||||||| |||||||| ||||| || ||| Sbjct 5868 CCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAATACA 5927 Query 36453 AACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGT 36512 | |||||| |||||||| || ||||| || ||||||||||||||||| || || ||||| Sbjct 5928 ATCATAAAGTTGAAAGTACCAGAAATGCCTAGAGGCATACCATCAGAAAAGCTTCCTTGA 5987 Query 36513 CCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTACA 36572 |||| ||||| | ||||| |||||| || ||||||||||| |||||||| || ||| Sbjct 5988 CCAATTGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATACGCAACA 6047 Query 36573 CATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGCT 36632 ||||| || | |||||| || | |||| |||||||| | || |||| |||| Sbjct 6048 GCAATCCAAGGGCGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATGTAACAA 6107 Query 36633 GAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCAC 36692 | | ||| | | ||||| | ||||| || | ||| || || || || |||||||| Sbjct 6108 GCTACACCTAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCAT 6167 Query 36693 TCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGATGAT 36752 || || | | ||| |||||||| ||||| || ||||| | |||||| || || | Sbjct 6168 TCATCAACAGATGCCGCTTCCCATATTGGATAAAAGTGCAAACCGATAGCCGCAGAAGTA 6227 Query 36753 GGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTCA 36812 || | || || || ||||| || |||||||| || || || | ||| || ||||| ||| Sbjct 6228 GGAATAATGGCACCGGAGATAATATTGTTTCCGTAAAGCAAAGATCCAGAAACAGGTTCA 6287 Query 36813 CGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCACT 36872 ||||||||||| ||||| || ||||| ||||||| || || || | |||| | | | Sbjct 6288 CGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATGATAAATACAGAAGTT 6347 Query 36873 GCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTTT 36932 || || || | | ||||||||| | || |||||||| || | || |||||||| | Sbjct 6348 GCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGGCGGTTTTCA 6407 Query 36933 GTACTTGTAACCCAGTCACATAA 36955 || || || | ||||| ||| || Sbjct 6408 GTGCTGGTTATCCAGTTACAGAA 6430 >seq7678 Length=557 Score = 232 bits (256), Expect = 2e-56 Identities = 283/386 (73%), Gaps = 0/386 (0%) Strand=Plus/Plus Query 35964 TCAGCAGCTGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATG 36023 ||| |||| || | ||| | ||||||||||| ||||||||||| ||||| |||||||| Sbjct 154 TCACCAGCAGCCAAGTCTAAGGGGAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATA 213 Query 36024 CCTAAGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCA 36083 || |||| || ||||| | | |||||||||||| | || ||| | || | ||||| Sbjct 214 CCCAAGTTAGCGCGGTTGATTACGTCAGCCCAAGTAGCGATGACGCGACCTTGAGAATCG 273 Query 36084 ACGACTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATA 36143 | ||||| || |||||||| || ||||| || || || ||||| ||| || || | | Sbjct 274 ATTACTGATTGGTTGAAGTTGAATCCGTTCAGGTTGAACGCCATTGTGCTGATACCTAAA 333 Query 36144 GCGGTAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTA 36203 ||||||| ||| || | | || ||||| ||||||| |||||| || | ||||| Sbjct 334 GCGGTAAACCAGATACCGATTACTGGCCATGCAGCCAAGAAGAAGTGCAGTGAACGGCTG 393 Query 36204 TTATTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 36263 || || ||| ||| || |||||||| | | |||||||| || || || || || ||| Sbjct 394 TTGTTGAAGGAAGCGTATTGGAAGATCAACCGACCAAAGTAACCGTGTGCAGCTACGATG 453 Query 36264 TTATACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTT 36323 || || || ||||||||||| ||||| || || || ||||| || ||||| | || Sbjct 454 TTGTAGGTTTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTTTGTGATTCGGTTTCTGTG 513 Query 36324 GTTTCACGAATAAGTGAGGAAGTAAC 36349 |||||||| | | ||||||||||| Sbjct 514 GTTTCACGTACCAAGGAGGAAGTAAC 539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150438464904326