Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq8857 551 2e-152 seq7678 205 3e-48 >seq8857 Length=8770 Score = 551 bits (610), Expect = 2e-152 Identities = 714/984 (73%), Gaps = 2/984 (0%) Strand=Plus/Plus Query 5195 GCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTG 5254 ||||| || || |||||||| |||||||| ||||| ||||| ||||||||||||||||| Sbjct 5448 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 5507 Query 5255 GCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGAC 5314 || ||||| | || ||| || || || || | | ||| | ||||| || || Sbjct 5508 GCGCGGTTAATGATATCAGCTCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 5567 Query 5315 TGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGC 5374 |||||||| || || || || | ||| ||||||||||| || || | || |||| | Sbjct 5568 TGATTGAAATTGAAACCATTTAAATTGAAAGCCATAGTACTAATACCTAAAGCAGTAAAC 5627 Query 5375 CATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAG 5434 || || | | |||||||||| ||| | ||||||||||||| ||| ||||| || Sbjct 5628 CAAATACCGATAACGGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTGAAA 5687 Query 5435 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTT 5494 || ||||| |||||||| | || ||||| || |||||||| || ||||| ||||| ||| Sbjct 5688 CTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAGTT 5747 Query 5495 TCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCACGA 5554 ||||||||||| |||||||| || || | || ||| | | || ||||| | Sbjct 5748 TCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCCTG 5807 Query 5555 ATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAATACC 5614 || | |||||| || | |||||||||||| || | | ||||| ||||| Sbjct 5808 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCACCAAATACA 5867 Query 5615 CCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAATACG 5674 ||||| ||||| | |||||| || || ||||||||||| |||||||| ||||||||||| Sbjct 5868 CCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAATACA 5927 Query 5675 AACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCCTGT 5734 | ||||||||| ||||||||||| || || ||||||||||||||| || ||||| || Sbjct 5928 ATCATAAAGTTGAAAGTACCAGAAATGCCTAGAGGCATACCATCAGAAAAGCTTCCTTGA 5987 Query 5735 CCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATATGCTAC 5793 || | ||||| | || || || | |||| || || ||||| || |||||||| || || Sbjct 5988 CCAATTGGGTAAATCAAGAAAACAGCAGTA-GCAGCTGCAACAGGAGCTGAATACGCAAC 6046 Query 5794 GCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTAAGC 5853 |||||| || ||||| || | | | |||| |||||||| | || |||| |||| Sbjct 6047 AGCAATCCAAGGGCGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATGTAACA 6106 Query 5854 TGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAGCCA 5913 || | ||| | | |||||| | || | || | || || || |||||||| | ||| Sbjct 6107 AGCTACACCTAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCA 6166 Query 5914 TTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGAGCT 5973 |||||| | | || |||||||| || ||||| ||||| || || || || || | Sbjct 6167 TTCATCAACAGATGCCGCTTCCCATATTGGATAAAAGTGCAAACCGATAGCCGCAGAAGT 6226 Query 5974 GGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTC 6033 || | || ||| || || || || |||||||| || || | |||||| | || ||||| Sbjct 6227 AGGAATAATGGCACCGGAGATAATATTGTTTCCGTAAAGCAAAGATCCAGAAACAGGTTC 6286 Query 6034 ACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAGT 6093 ||| || || || || || ||||| || ||||| | ||| |||| |||||| ||| ||| Sbjct 6287 ACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATGATAAATACAGAAGT 6346 Query 6094 TGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTTGTT 6153 |||||| || | | || ||||| || ||||||||||| || | || |||||||| | Sbjct 6347 TGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGGCGGTTTTC 6406 Query 6154 GGTGCTAGTAACCCAGTCACAGAA 6177 ||||| || | ||||| |||||| Sbjct 6407 AGTGCTGGTTATCCAGTTACAGAA 6430 >seq7678 Length=557 Score = 205 bits (226), Expect = 3e-48 Identities = 278/384 (72%), Gaps = 8/384 (2%) Strand=Plus/Plus Query 5153 ATTGAGGGTGCTGTTAAAGCTACTTCA----CTTGACTCAGCAGCTGCTAGATCAAGTGG 5208 |||| ||||| |||||||| || | ||| || ||||||| | || ||| || Sbjct 121 ATTGCAGGTGCAGTTAAAGCCACAGGAGCAACTTCAC-CAGCAGC--CAAGTCTAAG-GG 176 Query 5209 GAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTGGCACGGTTCAGGAC 5268 |||||||||||| || || |||||||| ||||||||||| | ||| || ||||| | || Sbjct 177 GAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAAGTTAGCGCGGTTGATTAC 236 Query 5269 ATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGACTGATTGAAGTTAAA 5328 || |||||||| | | || | ||| ||| || | ||||| || |||||||| || Sbjct 237 GTCAGCCCAAGTAGCGATGACGCGACCTTGAGAATCGATTACTGATTGGTTGAAGTTGAA 296 Query 5329 GCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATATGCAAACGAC 5388 ||||| || || || ||||| ||| ||| || | || ||||| ||| || | | || Sbjct 297 TCCGTTCAGGTTGAACGCCATTGTGCTGATACCTAAAGCGGTAAACCAGATACCGATTAC 356 Query 5389 GGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAA 5448 ||||| | ||||| |||||| || | |||||| ||||| ||| ||| || ||||| Sbjct 357 TGGCCATGCAGCCAAGAAGAAGTGCAGTGAACGGCTGTTGTTGAAGGAAGCGTATTGGAA 416 Query 5449 GATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGCC 5508 ||| | | |||||||| || || || || || ||||| || |||||||| ||||| || Sbjct 417 GATCAACCGACCAAAGTAACCGTGTGCAGCTACGATGTTGTAGGTTTCTTCTTCTTGTCC 476 Query 5509 GAATTTATATCCATAGTTCTGAGA 5532 ||| || || || ||||| || || Sbjct 477 GAACTTGTAACCGTAGTTTTGTGA 500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152633432403834