Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_016658.1
Length=47741
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 551 2e-152
seq7678 205 3e-48
>seq8857
Length=8770
Score = 551 bits (610), Expect = 2e-152
Identities = 714/984 (73%), Gaps = 2/984 (0%)
Strand=Plus/Plus
Query 5195 GCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTG 5254
||||| || || |||||||| |||||||| ||||| ||||| |||||||||||||||||
Sbjct 5448 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 5507
Query 5255 GCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGAC 5314
|| ||||| | || ||| || || || || | | ||| | ||||| || ||
Sbjct 5508 GCGCGGTTAATGATATCAGCTCAGGTATTAATTACACGACCTTGACTATCAACTACAGAT 5567
Query 5315 TGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGC 5374
|||||||| || || || || | ||| ||||||||||| || || | || |||| |
Sbjct 5568 TGATTGAAATTGAAACCATTTAAATTGAAAGCCATAGTACTAATACCTAAAGCAGTAAAC 5627
Query 5375 CATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAG 5434
|| || | | |||||||||| ||| | ||||||||||||| ||| ||||| ||
Sbjct 5628 CAAATACCGATAACGGGCCAAGCAGCTAAGAAGAAATGTAAAGAACGAGAGTTGTTGAAA 5687
Query 5435 CTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTT 5494
|| ||||| |||||||| | || ||||| || |||||||| || ||||| ||||| |||
Sbjct 5688 CTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAAGTT 5747
Query 5495 TCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCACGA 5554
||||||||||| |||||||| || || | || ||| | | || ||||| |
Sbjct 5748 TCTTCCTCTTGACCGAATTTGTAACCTTCATTAGCAGATTCATTTTCTGTAGTTTCCCTG 5807
Query 5555 ATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAATACC 5614
|| | |||||| || | |||||||||||| || | | ||||| |||||
Sbjct 5808 ATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGCCACCAAATACA 5867
Query 5615 CCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAATACG 5674
||||| ||||| | |||||| || || ||||||||||| |||||||| |||||||||||
Sbjct 5868 CCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAATACA 5927
Query 5675 AACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCCTGT 5734
| ||||||||| ||||||||||| || || ||||||||||||||| || ||||| ||
Sbjct 5928 ATCATAAAGTTGAAAGTACCAGAAATGCCTAGAGGCATACCATCAGAAAAGCTTCCTTGA 5987
Query 5735 CCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATATGCTAC 5793
|| | ||||| | || || || | |||| || || ||||| || |||||||| || ||
Sbjct 5988 CCAATTGGGTAAATCAAGAAAACAGCAGTA-GCAGCTGCAACAGGAGCTGAATACGCAAC 6046
Query 5794 GCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTAAGC 5853
|||||| || ||||| || | | | |||| |||||||| | || |||| ||||
Sbjct 6047 AGCAATCCAAGGGCGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATGTAACA 6106
Query 5854 TGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAGCCA 5913
|| | ||| | | |||||| | || | || | || || || |||||||| | |||
Sbjct 6107 AGCTACACCTAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCA 6166
Query 5914 TTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGAGCT 5973
|||||| | | || |||||||| || ||||| ||||| || || || || || |
Sbjct 6167 TTCATCAACAGATGCCGCTTCCCATATTGGATAAAAGTGCAAACCGATAGCCGCAGAAGT 6226
Query 5974 GGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTC 6033
|| | || ||| || || || || |||||||| || || | |||||| | || |||||
Sbjct 6227 AGGAATAATGGCACCGGAGATAATATTGTTTCCGTAAAGCAAAGATCCAGAAACAGGTTC 6286
Query 6034 ACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAGT 6093
||| || || || || || ||||| || ||||| | ||| |||| |||||| ||| |||
Sbjct 6287 ACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCTATGATAAATACAGAAGT 6346
Query 6094 TGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTTGTT 6153
|||||| || | | || ||||| || ||||||||||| || | || |||||||| |
Sbjct 6347 TGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGGCGGTTTTC 6406
Query 6154 GGTGCTAGTAACCCAGTCACAGAA 6177
||||| || | ||||| ||||||
Sbjct 6407 AGTGCTGGTTATCCAGTTACAGAA 6430
>seq7678
Length=557
Score = 205 bits (226), Expect = 3e-48
Identities = 278/384 (72%), Gaps = 8/384 (2%)
Strand=Plus/Plus
Query 5153 ATTGAGGGTGCTGTTAAAGCTACTTCA----CTTGACTCAGCAGCTGCTAGATCAAGTGG 5208
|||| ||||| |||||||| || | ||| || ||||||| | || ||| ||
Sbjct 121 ATTGCAGGTGCAGTTAAAGCCACAGGAGCAACTTCAC-CAGCAGC--CAAGTCTAAG-GG 176
Query 5209 GAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTGGCACGGTTCAGGAC 5268
|||||||||||| || || |||||||| ||||||||||| | ||| || ||||| | ||
Sbjct 177 GAAGTTGTGAGCGTTACGCTCGTGCATGACTTCCATACCCAAGTTAGCGCGGTTGATTAC 236
Query 5269 ATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGACTGATTGAAGTTAAA 5328
|| |||||||| | | || | ||| ||| || | ||||| || |||||||| ||
Sbjct 237 GTCAGCCCAAGTAGCGATGACGCGACCTTGAGAATCGATTACTGATTGGTTGAAGTTGAA 296
Query 5329 GCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATATGCAAACGAC 5388
||||| || || || ||||| ||| ||| || | || ||||| ||| || | | ||
Sbjct 297 TCCGTTCAGGTTGAACGCCATTGTGCTGATACCTAAAGCGGTAAACCAGATACCGATTAC 356
Query 5389 GGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGCATACTGGAA 5448
||||| | ||||| |||||| || | |||||| ||||| ||| ||| || |||||
Sbjct 357 TGGCCATGCAGCCAAGAAGAAGTGCAGTGAACGGCTGTTGTTGAAGGAAGCGTATTGGAA 416
Query 5449 GATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTCCTCTTGGCC 5508
||| | | |||||||| || || || || || ||||| || |||||||| ||||| ||
Sbjct 417 GATCAACCGACCAAAGTAACCGTGTGCAGCTACGATGTTGTAGGTTTCTTCTTCTTGTCC 476
Query 5509 GAATTTATATCCATAGTTCTGAGA 5532
||| || || || ||||| || ||
Sbjct 477 GAACTTGTAACCGTAGTTTTGTGA 500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 152633432403834
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |