Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_019443.1
Length=172879
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 587 8e-163
seq7678 300 2e-76
>seq8857
Length=8770
Score = 587 bits (650), Expect = 8e-163
Identities = 722/985 (73%), Gaps = 6/985 (1%)
Strand=Plus/Minus
Query 162502 TGTAACTGGGTCACCTCAGTTGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATG 162561
||||||||| | ||| ||| || ||| | || | || ||||| ||||| ||||||
Sbjct 6427 TGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTGATG 6368
Query 162562 ATCCCTTGCTTGCTCGCAGCAGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCA 162621
|||||| ||| | | ||| | || || ||||| || |||||||| || ||||||
Sbjct 6367 ATCCCTACCTTATTGACCGCAACTTCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCA 6308
Query 162622 GTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATC 162681
|| ||||| |||||||| | ||||||||| | || || | || || || ||||| ||
Sbjct 6307 GTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATT 6248
Query 162682 ATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGG 162741
||||| ||||| | |||||| ||| ||||| ||| | ||||| ||||| || |||
Sbjct 6247 ATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAATATGG 6188
Query 162742 GAAGCAGCAACTCTTGATGAGTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTC 162801
||||| ||| || ||||||| ||||| || |||||||| |||| | || | || |
Sbjct 6187 GAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTA 6128
Query 162802 CACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGCTTA 162861
|||||| | | || | | ||| |||||| |||||||||| || ||| |
Sbjct 6127 CACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTG 6068
Query 162862 GGTATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTG 162921
|||||||| |||||||| |||||| || || || || || | || || |||||
Sbjct 6067 GGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTT 6008
Query 162922 TTCTTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCT 162981
|||||| | || || | |||||||| || ||||| | |||||||| || ||||||
Sbjct 6007 TTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCT 5948
Query 162982 GGTACTTTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTC 163041
|||||||| |||| ||| | || ||||| || || ||||||||||| |||||||| ||
Sbjct 5947 GGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCCATTT 5888
Query 163042 CATATGATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCT 163101
|| ||| | || || || |||||||| ||||| || || |||||||||||||| |||||
Sbjct 5887 CACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTCC 5828
Query 163102 CTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTAT 163161
| || |||||| | | ||||| |||||||| || | || || || | |||||
Sbjct 5827 TTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGTTAC 5768
Query 163162 AAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGC 163221
|| ||||| ||||| ||||| ||||| || ||||| ||||||||||| || ||||| ||
Sbjct 5767 AAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGA 5708
Query 163222 TTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCA 163281
||||||||||| |||||| |||||||||||| ||||| | || |||||| | |||||
Sbjct 5707 TTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCT 5648
Query 163282 TTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTT 163341
| || || || | || ||||| ||||| | ||| | |||||||| ||||| |
Sbjct 5647 TGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTA 5588
Query 163342 AACGGTTTCAACTTCAACCAATCCGTCGTTGA---CGCAGGTGGTAAAGTGATTCCTACT 163398
|| |||||||| ||||| ||||| || ||||| |||| || || ||| |||
Sbjct 5587 AATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGT---GTAATTAATACC 5531
Query 163399 TGGGCAGATATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCT 163458
|| || |||||| ||||| | || |||||||||||||||||||| || |||||||||
Sbjct 5530 TGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 5471
Query 163459 CACAACTTCCCACTTGACCTTGCTG 163483
|| |||||||| || ||||| ||||
Sbjct 5470 CATAACTTCCCTCTAGACCTAGCTG 5446
>seq7678
Length=557
Score = 300 bits (332), Expect = 2e-76
Identities = 328/433 (76%), Gaps = 2/433 (0%)
Strand=Plus/Minus
Query 163092 GCACGGTTCTCTTGTTACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAA 163151
||||||||| | |||||||| || | | | ||||| || || || ||||| ||
Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493
Query 163152 CTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATA 163211
||||||||| |||||||||||||||||||| || |||||||| || ||||| || || ||
Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433
Query 163212 CTTTGGTCGCTTGATCTTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTT 163271
||||||||| ||||||||||| || || || ||||||||| |||||||| ||||||||
Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373
Query 163272 CCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGC 163331
| | ||||||| || || || | |||||||| || || | ||| | || |||||
Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313
Query 163332 ATTCAACCTTAACGGTTTCAACTTCAACCAATCCGTCGTTGACGCAGGTGGTAAAGTGAT 163391
|||||||| ||||| ||||||||||||||||| || | || | ||| || ||
Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253
Query 163392 TCCTACTTGGGCAGATATCCTTAACAGAGCAGGACTT-GGTATGGAAGTTATGCACGAGC 163450
|||||||||| || | | ||| | || |||| ||||||||||| ||||||||||
Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGC-TAACTTGGGTATGGAAGTCATGCACGAGC 194
Query 163451 GTAATGCTCACAACTTCCCACTTGACCTTGCTGCTGCTGAGACATCTCAGGTTGCTCTAA 163510
|||| |||||||||||||| | ||| | ||||||| ||| ||| || ||| |||
Sbjct 193 GTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAA 134
Query 163511 CTGCACCTTCAAT 163523
|||||||| ||||
Sbjct 133 CTGCACCTGCAAT 121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 553023137958360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |