Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_019444.1
Length=176043
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 491 5e-134
seq7678 343 2e-89
seq7307 233 2e-56
seq7318 221 1e-52
>seq8857
Length=8770
Score = 491 bits (544), Expect = 5e-134
Identities = 686/959 (72%), Gaps = 2/959 (0%)
Strand=Plus/Minus
Query 162919 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACT 162978
|||||||| || | || ||||| || || ||||||| || || | ||| | ||||||
Sbjct 6403 AACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 6344
Query 162979 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATTGACGGCATCCGTGA 163037
||||| || ||| | |||||| | |||||||| || || || ||||| || || |||||
Sbjct 6343 -TCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 6285
Query 163038 GCCCGTCGCTGGTTCACTCATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCATC 163097
|| || |||| || | | || || ||||| || ||||| ||||| || |||| |
Sbjct 6284 ACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTAC 6225
Query 163098 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 163157
||| || || ||| | ||||| ||||| || |||||||| ||||| ||||||| ||
Sbjct 6224 TTCTGCGGCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATG 6165
Query 163158 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGC 163217
| | || || |||||||||| | || | || | |||||| | | || | |
Sbjct 6164 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTG 6105
Query 163218 ATATATGGGACGTGAATGGGAACTTTCATATCGCTTAGGTATGCGCCCCTGGATCTGTGT 163277
|| ||||| ||||| |||||||| | || | ||||||||||| ||||| |||
Sbjct 6104 TTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 6045
Query 163278 AGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCA 163337
|| || || || ||||||||||| || | || || ||| || | || || | |||||
Sbjct 6044 TGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCA 5985
Query 163338 AGGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGCACATTCAACTACATGCTTGT 163397
||| || ||||| | ||||| || ||||| ||||| || ||||||| ||| ||||
Sbjct 5984 AGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGT 5925
Query 163398 CTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTCGCTGGTGT 163457
||||| || || ||||||||||| |||||||| || || ||||| || || ||||||||
Sbjct 5924 ATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 5865
Query 163458 CTTCGGTGGATCACTCTTCTCGGCAATGCATGGCAGTCTTGTTACCTCTTCACTCGTCCG 163517
|| ||||| || || || || |||||||| | || || ||| | || |
Sbjct 5864 ATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAG 5805
Query 163518 TGAGACGACTGAAACTGAGTCACAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGAC 163577
|| || || |||| ||| || || | |||||||| || |||||||| ||||| ||
Sbjct 5804 GGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAAC 5745
Query 163578 ATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCATT 163637
|| || || || || || ||||| || || || || |||||||||||||||||| ||
Sbjct 5744 TTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTT 5685
Query 163638 CAACAACAGCAGAAGTCTTCACTTCTTCCTGGCAGCATGGCCTGTCGTCGGAATCTGGTT 163697
||||||| | | | || |||||| | || || ||||| || |||| || |||||
Sbjct 5684 CAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTT 5625
Query 163698 TACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTC 163757
|||||| | || | || || ||||| ||||| | || |||||||| ||||| || ||
Sbjct 5624 TACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATC 5565
Query 163758 CATCCTTGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTGCTTAACCGCGCTGG 163817
| ||||| |||| |||||||| | || || || || || | |||||||||||
Sbjct 5564 TGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTAA 5505
Query 163818 TCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGATCTTGCTG 163876
|| |||||||||||||||||||| ||||| || || |||||||| || || || ||||
Sbjct 5504 CCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTG 5446
>seq7678
Length=557
Score = 343 bits (380), Expect = 2e-89
Identities = 328/420 (78%), Gaps = 0/420 (0%)
Strand=Plus/Minus
Query 163498 GTTACCTCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAAAACTATGGTTACAAG 163557
||||| || || | || ||||| || || ||||| || ||||||||||| |||||||||
Sbjct 539 GTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTACAAG 480
Query 163558 TTTGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTG 163617
|| || ||||||||||| || ||||||||||| || ||||| || ||||| ||||| |||
Sbjct 479 TTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCGGTTG 420
Query 163618 ATCTTCCAATATGCATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTGGCAGCATGG 163677
||||||||||| || || |||||||||||| | || ||||||||| |||| ||||||
Sbjct 419 ATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTTCTTGGCTGCATGG 360
Query 163678 CCTGTCGTCGGAATCTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAAC 163737
|| || |||| ||||||||||| || | || | ||||| ||||| |||||||| |||
Sbjct 359 CCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGCGTTCAACCTGAAC 300
Query 163738 GGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGCTCAACACTTGGGCA 163797
|| |||||||||||||| || | | ||| ||| ||||| || || ||||||||
Sbjct 299 GGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCATCGCTACTTGGGCT 240
Query 163798 GACGTGCTTAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 163857
||||| | ||||||||| ||||||||||||| ||||| ||||||||||| ||||||
Sbjct 239 GACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCGTAACGCTCACAAC 180
Query 163858 TTCCCACTCGATCTTGCTGCTGCTGAGTCCACTCCTGTGGCGCTTTCAGCACCTGCTATC 163917
||||| | || | ||||||| ||| |||||||||| | | |||||||| |||
Sbjct 179 TTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAACTGCACCTGCAATC 120
>seq7307
Length=548
Score = 233 bits (258), Expect = 2e-56
Identities = 339/476 (71%), Gaps = 2/476 (0%)
Strand=Plus/Plus
Query 165151 TCCATATGATGGGTGTTGCAGGTATCTTGGGAGGAGCATTGCTATCTGCTATTCATGGAG 165210
|||| |||||||| || || ||| | | || ||||| | | | ||| ||||| ||||
Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60
Query 165211 TCACAGTTGAAAATACATTATACGAGGATGGAGA-GCAGGCAAATACCTTTAAGGCGTTT 165269
|||||| ||||| || |||| || || || || ||| |||| ||||| || ||
Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAA-ACCTTCCGCGCCTTC 119
Query 165270 GATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAG 165329
| | || || | |||||| || || || ||||| || || ||||| |||||||| |||
Sbjct 120 AACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAG 179
Query 165330 ATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCT 165389
|| ||||| || || || || ||||| |||||| | || || |||||| ||||||| ||
Sbjct 180 ATATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCA 239
Query 165390 GTTATGGGTCTTTGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCT 165449
|| | || | |||| | || | || || | ||| | || | ||||| || |||
Sbjct 240 GTCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCT 299
Query 165450 TACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTAC 165509
||||| ||||| || || | | ||||||||||| ||||||||||| || |||||
Sbjct 300 TACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTAT 359
Query 165510 ACCAAAAACATCCTATTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCC 165569
||||||||||| | |||| || || | || |||||| |||| ||| ||||| ||
Sbjct 360 ACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCT 419
Query 165570 CATGAAAACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAATA 165625
|| ||| | ||| | |||||||| || || | ||| | || ||||| || |||||
Sbjct 420 CACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAATA 475
>seq7318
Length=447
Score = 221 bits (244), Expect = 1e-52
Identities = 248/332 (75%), Gaps = 0/332 (0%)
Strand=Plus/Plus
Query 164988 AATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCA 165047
||||| || || || |||||||| |||||||||||||| || || || || || |||
Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60
Query 165048 CTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTC 165107
||||||||| | |||||||||| || || ||||| || ||||| || ||| | |||
Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120
Query 165108 CTGTTGTTCCTTCAAGGATTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGTGTT 165167
| | || ||||||| || || || |||||| | ||||| || ||||||||||| |||
Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180
Query 165168 GCAGGTATCTTGGGAGGAGCATTGCTATCTGCTATTCATGGAGTCACAGTTGAAAATACA 165227
|| ||| | ||||| | || |||||| ||||||||||| | || || ||||||||
Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240
Query 165228 TTATACGAGGATGGAGAGCAGGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAA 165287
|||| || ||||| || |||||||| || ||| ||| | | || || | |||
Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300
Query 165288 GAGACTTATTCTATGGTCACTGCAAACCGCTT 165319
|| |||||||| ||||||||||| ||||||||
Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTT 332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 563146809169720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |