Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq8857 491 5e-134 seq7678 343 2e-89 seq7307 233 2e-56 seq7318 221 1e-52 >seq8857 Length=8770 Score = 491 bits (544), Expect = 5e-134 Identities = 686/959 (72%), Gaps = 2/959 (0%) Strand=Plus/Minus Query 162919 AACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCAACTCTGTTGGCAGCAACT 162978 |||||||| || | || ||||| || || ||||||| || || | ||| | |||||| Sbjct 6403 AACCGCCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 6344 Query 162979 ATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATTGACGGCATCCGTGA 163037 ||||| || ||| | |||||| | |||||||| || || || ||||| || || ||||| Sbjct 6343 -TCTGTATTTATCATAGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 6285 Query 163038 GCCCGTCGCTGGTTCACTCATGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCATC 163097 || || |||| || | | || || ||||| || ||||| ||||| || |||| | Sbjct 6284 ACCTGTTTCTGGATCTTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTAC 6225 Query 163098 TTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCCGCATCACTTGATGAGTG 163157 ||| || || ||| | ||||| ||||| || |||||||| ||||| ||||||| || Sbjct 6224 TTCTGCGGCTATCGGTTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATG 6165 Query 163158 GCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTTCCTTATCGGCATCTATGC 163217 | | || || |||||||||| | || | || | |||||| | | || | | Sbjct 6164 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTG 6105 Query 163218 ATATATGGGACGTGAATGGGAACTTTCATATCGCTTAGGTATGCGCCCCTGGATCTGTGT 163277 || ||||| ||||| |||||||| | || | ||||||||||| ||||| ||| Sbjct 6104 TTACATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 6045 Query 163278 AGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCA 163337 || || || || ||||||||||| || | || || ||| || | || || | ||||| Sbjct 6044 TGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCA 5985 Query 163338 AGGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGCACATTCAACTACATGCTTGT 163397 ||| || ||||| | ||||| || ||||| ||||| || ||||||| ||| |||| Sbjct 5984 AGGAAGCTTTTCTGATGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGT 5925 Query 163398 CTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTCGCTGGTGT 163457 ||||| || || ||||||||||| |||||||| || || ||||| || || |||||||| Sbjct 5924 ATTCCAGGCTGAACACAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGT 5865 Query 163458 CTTCGGTGGATCACTCTTCTCGGCAATGCATGGCAGTCTTGTTACCTCTTCACTCGTCCG 163517 || ||||| || || || || |||||||| | || || ||| | || | Sbjct 5864 ATTTGGTGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAG 5805 Query 163518 TGAGACGACTGAAACTGAGTCACAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGAC 163577 || || || |||| ||| || || | |||||||| || |||||||| ||||| || Sbjct 5804 GGAAACTACAGAAAATGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAAC 5745 Query 163578 ATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCATT 163637 || || || || || || ||||| || || || || |||||||||||||||||| || Sbjct 5744 TTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTT 5685 Query 163638 CAACAACAGCAGAAGTCTTCACTTCTTCCTGGCAGCATGGCCTGTCGTCGGAATCTGGTT 163697 ||||||| | | | || |||||| | || || ||||| || |||| || ||||| Sbjct 5684 CAACAACTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTT 5625 Query 163698 TACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTC 163757 |||||| | || | || || ||||| ||||| | || |||||||| ||||| || || Sbjct 5624 TACTGCTTTAGGTATTAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATC 5565 Query 163758 CATCCTTGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGACGTGCTTAACCGCGCTGG 163817 | ||||| |||| |||||||| | || || || || || | ||||||||||| Sbjct 5564 TGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTAA 5505 Query 163818 TCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGATCTTGCTG 163876 || |||||||||||||||||||| ||||| || || |||||||| || || || |||| Sbjct 5504 CCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTG 5446 >seq7678 Length=557 Score = 343 bits (380), Expect = 2e-89 Identities = 328/420 (78%), Gaps = 0/420 (0%) Strand=Plus/Minus Query 163498 GTTACCTCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAAAACTATGGTTACAAG 163557 ||||| || || | || ||||| || || ||||| || ||||||||||| ||||||||| Sbjct 539 GTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAACTACGGTTACAAG 480 Query 163558 TTTGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTG 163617 || || ||||||||||| || ||||||||||| || ||||| || ||||| ||||| ||| Sbjct 479 TTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTACTTTGGTCGGTTG 420 Query 163618 ATCTTCCAATATGCATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTGGCAGCATGG 163677 ||||||||||| || || |||||||||||| | || ||||||||| |||| |||||| Sbjct 419 ATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTTCTTGGCTGCATGG 360 Query 163678 CCTGTCGTCGGAATCTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAAC 163737 || || |||| ||||||||||| || | || | ||||| ||||| |||||||| ||| Sbjct 359 CCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGCGTTCAACCTGAAC 300 Query 163738 GGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGCTCAACACTTGGGCA 163797 || |||||||||||||| || | | ||| ||| ||||| || || |||||||| Sbjct 299 GGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCATCGCTACTTGGGCT 240 Query 163798 GACGTGCTTAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 163857 ||||| | ||||||||| ||||||||||||| ||||| ||||||||||| |||||| Sbjct 239 GACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCGTAACGCTCACAAC 180 Query 163858 TTCCCACTCGATCTTGCTGCTGCTGAGTCCACTCCTGTGGCGCTTTCAGCACCTGCTATC 163917 ||||| | || | ||||||| ||| |||||||||| | | |||||||| ||| Sbjct 179 TTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAACTGCACCTGCAATC 120 >seq7307 Length=548 Score = 233 bits (258), Expect = 2e-56 Identities = 339/476 (71%), Gaps = 2/476 (0%) Strand=Plus/Plus Query 165151 TCCATATGATGGGTGTTGCAGGTATCTTGGGAGGAGCATTGCTATCTGCTATTCATGGAG 165210 |||| |||||||| || || ||| | | || ||||| | | | ||| ||||| |||| Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60 Query 165211 TCACAGTTGAAAATACATTATACGAGGATGGAGA-GCAGGCAAATACCTTTAAGGCGTTT 165269 |||||| ||||| || |||| || || || || ||| |||| ||||| || || Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAA-ACCTTCCGCGCCTTC 119 Query 165270 GATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAG 165329 | | || || | |||||| || || || ||||| || || ||||| |||||||| ||| Sbjct 120 AACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAG 179 Query 165330 ATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCT 165389 || ||||| || || || || ||||| |||||| | || || |||||| ||||||| || Sbjct 180 ATATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCA 239 Query 165390 GTTATGGGTCTTTGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCT 165449 || | || | |||| | || | || || | ||| | || | ||||| || ||| Sbjct 240 GTCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCT 299 Query 165450 TACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTAC 165509 ||||| ||||| || || | | ||||||||||| ||||||||||| || ||||| Sbjct 300 TACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTAT 359 Query 165510 ACCAAAAACATCCTATTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCC 165569 ||||||||||| | |||| || || | || |||||| |||| ||| ||||| || Sbjct 360 ACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCT 419 Query 165570 CATGAAAACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAATA 165625 || ||| | ||| | |||||||| || || | ||| | || ||||| || ||||| Sbjct 420 CACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAATA 475 >seq7318 Length=447 Score = 221 bits (244), Expect = 1e-52 Identities = 248/332 (75%), Gaps = 0/332 (0%) Strand=Plus/Plus Query 164988 AATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCA 165047 ||||| || || || |||||||| |||||||||||||| || || || || || ||| Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 165048 CTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTC 165107 ||||||||| | |||||||||| || || ||||| || ||||| || ||| | ||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 165108 CTGTTGTTCCTTCAAGGATTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGTGTT 165167 | | || ||||||| || || || |||||| | ||||| || ||||||||||| ||| Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 165168 GCAGGTATCTTGGGAGGAGCATTGCTATCTGCTATTCATGGAGTCACAGTTGAAAATACA 165227 || ||| | ||||| | || |||||| ||||||||||| | || || |||||||| Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 165228 TTATACGAGGATGGAGAGCAGGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAA 165287 |||| || ||||| || |||||||| || ||| ||| | | || || | ||| Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 165288 GAGACTTATTCTATGGTCACTGCAAACCGCTT 165319 || |||||||| ||||||||||| |||||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTT 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563146809169720