Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq3379 120 6e-22
seq2421 86.0 1e-11
>seq3379
Length=20444
Score = 120 bits (132), Expect = 6e-22
Identities = 291/432 (67%), Gaps = 8/432 (2%)
Strand=Plus/Minus
Query 25603 GCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGG 25662
|| ||||| || ||||| || ||||| || ||||| || || ||||| ||| |||
Sbjct 1128 GCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAAAACTTGGTCGAGAATTTCTCCACC 1069
Query 25663 GAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTG 25722
|| || ||| | ||| |||||| |||||||||||||||| || || |||||||| |
Sbjct 1068 GAGGTCCAGATCCCGGAAGCCAAGAGTTTCTACGGTTTCCAAATCGCTATCGAAAACATT 1009
Query 25723 CACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGACGTCGCCGAGAGAGA 25781
|| || || || || | | | ||| || ||||| | || || || ||
Sbjct 1008 CATTCCGAAACCTACTCCTTGTTGATCGAT-ACCTACATCAAGGATCCAAAGGAAAGTGA 950
Query 25782 TCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAG-GAAGGCGCGGTGGGCCA 25840
|||| |||||||| ||| ||||| | | | |||||| ||||||
Sbjct 949 ATTCTTGTTCAACGCCATCGACACCAT-CCCAGAAATTTGCGAGAAGGCCGAATGGGCCC 891
Query 25841 TGAAGTGGATC-AACAGCCAGA-GCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGC 25898
| | |||||| || | |||| ||||| ||| || || | || || ||||| || |
Sbjct 890 TTAGATGGATCCAAGACGCAGACGCGCT--GTTCGGTGAAAGACTAGTCGCCTTCGCGTC 833
Query 25899 TGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGG 25958
| || || | || ||| ||| || || || ||||||||||| | ||| ||| ||
Sbjct 832 CATCGAAGGTGTTTTCTTCTCCGGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAGAGAGG 773
Query 25959 GACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAG 26018
| ||||||||| || ||| ||||||||| | ||| |||| ||||| ||| | ||||
Sbjct 772 TATGATGCCCGGGTTGACCTTCTCCAACGAGTTGATCTGCAGAGACGAAGGTTTGCACAC 713
Query 26019 AGATTTTGCCTG 26030
|| ||||||||
Sbjct 712 CGACTTTGCCTG 701
>seq2421
Length=19268
Score = 86.0 bits (94), Expect = 1e-11
Identities = 345/532 (65%), Gaps = 15/532 (3%)
Strand=Plus/Minus
Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAA 25571
||||||||| ||||| |||||| || | ||||| || | | |||| || | ||
Sbjct 4484 CTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGGAACAACAGAATGAA 4425
Query 25572 AGA---CGAGCAGCATTTTC---TCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGG 25625
|| |||| || ||||| || || || | || || || || || ||||| ||
Sbjct 4424 CGAGAACGAG-AGATTTTTCATTTCCAGA--GTTCTTGCCTTTTTCGCCGCTTCTGACGG 4368
Query 25626 TATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAA 25685
||| || || || || || || | ||| ||| ||||| || ||||| ||
Sbjct 4367 TATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATTCCAGAGGCAAA 4308
Query 25686 GTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCT 25745
| |||||||||||||||| || || |||||| | |||||||| || || | |
Sbjct 4307 GAGTTTCTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACTTACTCCTTGTT 4248
Query 25746 TCT-GATGACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGC 25804
| ||| || ||||| | ||| || || || |||| |||||| |
Sbjct 4247 GATCGAT-ACCTACATCAAGGACCCTAAAGAAAGTGAATTCTTGTTCAATGCCATTCACA 4189
Query 25805 ACATACCCAGCATCAAGAG-GAAGGCGCGGTGGGCCATGAAGTGGAT-CAACAGCCAGAG 25862
||| ||||| | | | |||||| ||||| | | ||||| ||| | | ||
Sbjct 4188 CCAT-CCCAGAAATCGGTGAGAAGGCCGAATGGGCTTTAAGATGGATTCAAGACGCTGA- 4131
Query 25863 CGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGG 25922
||| |||||| || | || || |||||||| | | || || |||||||| |||
Sbjct 4130 CGCCTTGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGG 4071
Query 25923 TTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTC 25982
||| ||||| |||| |||||| | || ||| || | |||||||| | ||||||
Sbjct 4070 TTCCTTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTC 4011
Query 25983 CAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTG 26034
|||||| | ||| | || ||||| ||| | |||| || ||||| ||| ||
Sbjct 4010 CAACGAATTGATCTGTAGAGACGAAGGTTTGCACACCGACTTTGCATGCTTG 3959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928741245415360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |