Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq8857 592 2e-164 seq7678 300 2e-76 seq7307 273 2e-68 seq7318 228 8e-55 >seq8857 Length=8770 Score = 592 bits (656), Expect = 2e-164 Identities = 698/942 (74%), Gaps = 2/942 (0%) Strand=Plus/Minus Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGCTTCATTAC 8348 || |||||||| ||| | |||||||| ||| || ||| |||| || | || || | Sbjct 6388 GGATGGTTTGGTGTTTTGATGATCCCTACC-TTATTGACCGCAACTTCTGTATTTATCAT 6330 Query 8349 CGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATC 8408 || ||| ||||||||||||| || || || || || || || ||||| ||| ||||||| Sbjct 6329 AGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 6270 Query 8409 TCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGG 8468 | | | ||||| ||||| || ||||| ||||| || |||| | ||| || || || Sbjct 6269 TTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGG 6210 Query 8469 CCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGG 8528 | ||||| || || || |||||||| || ||| ||||||| ||| | ||||| ||||| Sbjct 6209 TTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGG 6150 Query 8529 TCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGA 8588 |||||| |||| | ||| | |||||| | || || || | ||| ||||||||||| Sbjct 6149 TCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGA 6090 Query 8589 ATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCC 8648 |||||||| || ||| || || ||||| |||||||| |||||| || || ||||| Sbjct 6089 GTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCC 6030 Query 8649 TGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGA 8708 |||||| |||||| ||||||| ||| | | || || |||||||||| || ||||| Sbjct 6029 TGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGA 5970 Query 8709 TGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCA 8768 |||||||||||| || || || ||||| ||||||| |||| |||| ||||||||||| || Sbjct 5969 TGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACA 5910 Query 8769 CAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCT 8828 ||||||||| |||||||| || |||||| | ||||| |||||||| || || || || || Sbjct 5909 CAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCT 5850 Query 8829 CTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAC 8888 ||| || ||||||||||| | || |||||| || | | || || || |||| Sbjct 5849 ATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAA 5790 Query 8889 CGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGC 8948 || ||| || | || ||||| ||||||||||| || |||||||| || ||||| || Sbjct 5789 TGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGC 5730 Query 8949 CGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAG 9008 |||||||| || ||||| || |||||||||||||||||| ||| ||||| ||| | Sbjct 5729 TGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTC 5670 Query 9009 CTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGT 9068 || ||||||||| | ||||| ||||| || | || || |||||||| || | || | Sbjct 5669 TTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTAT 5610 Query 9069 CTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACA 9128 || ||||||||||| | ||||| ||||| ||||| || || | | || | || Sbjct 5609 TAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCA 5550 Query 9129 AGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGT 9188 ||| || || | || ||||| || || | |||||||||| || ||||||||||| Sbjct 5549 AGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGT 5490 Query 9189 CATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGC 9230 ||||| ||| | || || || |||||||| || ||||| || Sbjct 5489 TATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 5448 >seq7678 Length=557 Score = 300 bits (332), Expect = 2e-76 Identities = 329/436 (75%), Gaps = 6/436 (1%) Strand=Plus/Minus Query 8841 GCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAACCGAGTCTCAAAA 8900 ||| ||||| | |||||||| || |||| ||||| ||||| |||||||| || ||||| Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 8901 CTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGCTA 8960 ||| || ||||||||||| |||||||| ||||| |||||||| || || || || || || Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 8961 CTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAGCT---TGCATTT 9017 ||||||||| |||||||||||||| || || || ||||| || | | |||| || Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAAC---AGCCGTTCACTGCACTT 376 Query 9018 CTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGTCTCGACCAT 9077 |||| | ||||| ||||| || | || |||||||||||||| | || || || || Sbjct 375 CTTCTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAAT 316 Query 9078 GGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACAAGGACGAGT 9137 ||| |||||||| || || |||||||||||||| || | ||||| ||||| || || Sbjct 315 GGCGTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGT 256 Query 9138 GCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGTCATGCACGA 9197 || || ||||| |||||| | |||||||| | |||||||||||||||||||| Sbjct 255 CATCGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGA 196 Query 9198 AAGAAACGCACACAACTTCCCGCTTGACCTTGCGGCTGCTGAGTCCACACCTGTGGCCTT 9257 | ||||| ||||||||||| | ||| | || |||| ||| | |||||||| || Sbjct 195 GCGTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTT 136 Query 9258 GACTGCTCCTTCTATC 9273 ||||| ||| | ||| Sbjct 135 AACTGCACCTGCAATC 120 >seq7307 Length=548 Score = 273 bits (302), Expect = 2e-68 Identities = 349/481 (73%), Gaps = 0/481 (0%) Strand=Plus/Plus Query 10359 TCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAG 10418 |||| ||||||||||| || ||| |||| || || ||||| | | || || ||||||| Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60 Query 10419 TCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCTTTTG 10478 ||| ||||||||||| | | | |||| || ||| | | || || ||| || || Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCA 120 Query 10479 ATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGA 10538 | ||| |||| |||||| ||||| || ||||| || || ||||| |||||||| |||| Sbjct 121 ACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGA 180 Query 10539 TATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTG 10598 |||| || || || || ||| ||||| ||| | || ||||| |||||||||||||| | Sbjct 181 TATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAG 240 Query 10599 TTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTT 10658 | | || | |||| | || | |||||| | ||| | || | || || || |||| Sbjct 241 TCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTT 300 Query 10659 ACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTATA 10718 |||| || ||||| ||||| | |||| ||||||| || |||||||| || ||||||| Sbjct 301 ACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATA 360 Query 10719 CGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAACCAC 10778 | || || || | |||||||| ||| | || || |||||||| || || || || | Sbjct 361 CCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTC 420 Query 10779 ACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCCTAGAGGTAATGCACTGTGATATTCCT 10838 ||||| ||||| |||||||| || ||||| ||| | ||||| || || | ||| ||| Sbjct 421 ACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAATAGACCT 480 Query 10839 T 10839 | Sbjct 481 T 481 >seq7318 Length=447 Score = 228 bits (252), Expect = 8e-55 Identities = 253/336 (75%), Gaps = 1/336 (0%) Strand=Plus/Plus Query 10196 AATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTCATCTATCCA 10255 ||||| ||||| |||||||| || |||||||||||||| ||| || || || |||||| Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 10256 CTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTCGCGGCGATTTTCCGCTTC 10315 || || ||| || ||||||| |||||||| ||||| || || || || || || |||||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 10316 CTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGAGTT 10375 | || || | || || |||||||||||||| | || || || ||||||||||||||| Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 10376 GCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACTGTAGAAAACACA 10435 || ||| || |||| | || || |||| || || || || | || |||||||| || Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 10436 CTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCTTTTGATAGCACTCAAGAAGAA 10495 | | | ||||||| || ||||| || ||| |||||| | ||||||| ||| Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 10496 GAGACCTATTCGATGGTTACTGCTAACCG-TTTCTG 10530 || || ||||| ||||| ||||||||||| |||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCTG 336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516422418936000