Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_019516.1
Length=161440
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 592 2e-164
seq7678 300 2e-76
seq7307 273 2e-68
seq7318 228 8e-55
>seq8857
Length=8770
Score = 592 bits (656), Expect = 2e-164
Identities = 698/942 (74%), Gaps = 2/942 (0%)
Strand=Plus/Minus
Query 8290 GGCTGGTTTGGCGTTCTCATGATCCCAACCCTTCTTG-CCGCTACAATTTGCTTCATTAC 8348
|| |||||||| ||| | |||||||| ||| || ||| |||| || | || || |
Sbjct 6388 GGATGGTTTGGTGTTTTGATGATCCCTACC-TTATTGACCGCAACTTCTGTATTTATCAT 6330
Query 8349 CGCATTCGTTGCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATC 8408
|| ||| ||||||||||||| || || || || || || || ||||| ||| |||||||
Sbjct 6329 AGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 6270
Query 8409 TCTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGG 8468
| | | ||||| ||||| || ||||| ||||| || |||| | ||| || || ||
Sbjct 6269 TTTGCTTTACGGAAACAATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGG 6210
Query 8469 CCTCCACTTCTACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGG 8528
| ||||| || || || |||||||| || ||| ||||||| ||| | ||||| |||||
Sbjct 6209 TTTGCACTTTTATCCAATATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGG 6150
Query 8529 TCCTTACCAGCTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGA 8588
|||||| |||| | ||| | |||||| | || || || | ||| |||||||||||
Sbjct 6149 TCCTTATGAGCTAATTGTTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGA 6090
Query 8589 ATGGGAACTTTCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCC 8648
|||||||| || ||| || || ||||| |||||||| |||||| || || |||||
Sbjct 6089 GTGGGAACTGAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCC 6030
Query 8649 TGTTGCCGCTGCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGA 8708
|||||| |||||| ||||||| ||| | | || || |||||||||| || |||||
Sbjct 6029 TGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGA 5970
Query 8709 TGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCA 8768
|||||||||||| || || || ||||| ||||||| |||| |||| ||||||||||| ||
Sbjct 5969 TGGTATGCCTCTAGGCATTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACA 5910
Query 8769 CAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCT 8828
||||||||| |||||||| || |||||| | ||||| |||||||| || || || || ||
Sbjct 5909 CAACATCCTTATGCACCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCT 5850
Query 8829 CTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAC 8888
||| || ||||||||||| | || |||||| || | | || || || ||||
Sbjct 5849 ATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAA 5790
Query 8889 CGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGC 8948
|| ||| || | || ||||| ||||||||||| || |||||||| || ||||| ||
Sbjct 5789 TGAATCTGCTAATGAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGC 5730
Query 8949 CGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAG 9008
|||||||| || ||||| || |||||||||||||||||| ||| ||||| ||| |
Sbjct 5729 TGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTC 5670
Query 9009 CTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGT 9068
|| ||||||||| | ||||| ||||| || | || || |||||||| || | || |
Sbjct 5669 TTTACATTTCTTCTTAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTAT 5610
Query 9069 CTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACA 9128
|| ||||||||||| | ||||| ||||| ||||| || || | | || | ||
Sbjct 5609 TAGTACTATGGCTTTCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCA 5550
Query 9129 AGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGT 9188
||| || || | || ||||| || || | |||||||||| || |||||||||||
Sbjct 5549 AGGTCGTGTAATTAATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGT 5490
Query 9189 CATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGC 9230
||||| ||| | || || || |||||||| || ||||| ||
Sbjct 5489 TATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 5448
>seq7678
Length=557
Score = 300 bits (332), Expect = 2e-76
Identities = 329/436 (75%), Gaps = 6/436 (1%)
Strand=Plus/Minus
Query 8841 GCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAACCGAGTCTCAAAA 8900
||| ||||| | |||||||| || |||| ||||| ||||| |||||||| || |||||
Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493
Query 8901 CTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGCTA 8960
||| || ||||||||||| |||||||| ||||| |||||||| || || || || || ||
Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433
Query 8961 CTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAGCT---TGCATTT 9017
||||||||| |||||||||||||| || || || ||||| || | | |||| ||
Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAAC---AGCCGTTCACTGCACTT 376
Query 9018 CTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGTCTCGACCAT 9077
|||| | ||||| ||||| || | || |||||||||||||| | || || || ||
Sbjct 375 CTTCTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAAT 316
Query 9078 GGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACAAGGACGAGT 9137
||| |||||||| || || |||||||||||||| || | ||||| ||||| || ||
Sbjct 315 GGCGTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGT 256
Query 9138 GCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGTCATGCACGA 9197
|| || ||||| |||||| | |||||||| | ||||||||||||||||||||
Sbjct 255 CATCGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGA 196
Query 9198 AAGAAACGCACACAACTTCCCGCTTGACCTTGCGGCTGCTGAGTCCACACCTGTGGCCTT 9257
| ||||| ||||||||||| | ||| | || |||| ||| | |||||||| ||
Sbjct 195 GCGTAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTT 136
Query 9258 GACTGCTCCTTCTATC 9273
||||| ||| | |||
Sbjct 135 AACTGCACCTGCAATC 120
>seq7307
Length=548
Score = 273 bits (302), Expect = 2e-68
Identities = 349/481 (73%), Gaps = 0/481 (0%)
Strand=Plus/Plus
Query 10359 TCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAG 10418
|||| ||||||||||| || ||| |||| || || ||||| | | || || |||||||
Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60
Query 10419 TCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCTTTTG 10478
||| ||||||||||| | | | |||| || ||| | | || || ||| || ||
Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCA 120
Query 10479 ATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGA 10538
| ||| |||| |||||| ||||| || ||||| || || ||||| |||||||| ||||
Sbjct 121 ACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGA 180
Query 10539 TATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTG 10598
|||| || || || || ||| ||||| ||| | || ||||| |||||||||||||| |
Sbjct 181 TATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAG 240
Query 10599 TTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTT 10658
| | || | |||| | || | |||||| | ||| | || | || || || ||||
Sbjct 241 TCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTT 300
Query 10659 ACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTATA 10718
|||| || ||||| ||||| | |||| ||||||| || |||||||| || |||||||
Sbjct 301 ACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATA 360
Query 10719 CGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTGACCAACCAC 10778
| || || || | |||||||| ||| | || || |||||||| || || || || |
Sbjct 361 CCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTC 420
Query 10779 ACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCCTAGAGGTAATGCACTGTGATATTCCT 10838
||||| ||||| |||||||| || ||||| ||| | ||||| || || | ||| |||
Sbjct 421 ACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAATAGACCT 480
Query 10839 T 10839
|
Sbjct 481 T 481
>seq7318
Length=447
Score = 228 bits (252), Expect = 8e-55
Identities = 253/336 (75%), Gaps = 1/336 (0%)
Strand=Plus/Plus
Query 10196 AATGCTATCGCGTTTTCTGGGCCTATTGCTGTTTTTGTCAGTGTTTTCCTCATCTATCCA 10255
||||| ||||| |||||||| || |||||||||||||| ||| || || || ||||||
Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60
Query 10256 CTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTTTCGGCGTCGCGGCGATTTTCCGCTTC 10315
|| || ||| || ||||||| |||||||| ||||| || || || || || || ||||||
Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120
Query 10316 CTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGAGTT 10375
| || || | || || |||||||||||||| | || || || |||||||||||||||
Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180
Query 10376 GCTGGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACTGTAGAAAACACA 10435
|| ||| || |||| | || || |||| || || || || | || |||||||| ||
Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240
Query 10436 CTTTATCAAGATGGCGAACAAGCAAACACTTTCAAAGCTTTTGATAGCACTCAAGAAGAA 10495
| | | ||||||| || ||||| || ||| |||||| | ||||||| |||
Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300
Query 10496 GAGACCTATTCGATGGTTACTGCTAACCG-TTTCTG 10530
|| || ||||| ||||| ||||||||||| ||||||
Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCTG 336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 516422418936000
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