Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq1378 358 1e-94 >seq1378 Length=479 Score = 358 bits (396), Expect = 1e-94 Identities = 370/481 (77%), Gaps = 5/481 (1%) Strand=Plus/Minus Query 20824 CAGCGTCAGCGAAAACTCGGCAACGCCGCGTTGCAGCTTCTCCCACTTGGCTTTCGCTGC 20883 |||||||||||||||||| ||||| || || |||||||| ||||| ||||| || || || Sbjct 479 CAGCGTCAGCGAAAACTCAGCAACACCCCGCTGCAGCTTGTCCCATTTGGCCTTTGCGGC 420 Query 20884 ACTCATCGCGGCCT-TTTGAGTGGCGTAGACCGTGGTCAGCGTAAAAACATTATCCTCAC 20942 | ||||||||| ||||| ||||||| ||||||| |||| |||| || ||||| || Sbjct 419 GCGCATCGCGGCGGCTTTGA-TGGCGTAAACCGTGGGCAGCATAAACACGTTATCTTCGG 361 Query 20943 TGCCCGCCAGATACTCCCCCTTGCGCGCCTCCGGCTCCTTGGCGGTCGCGGCTTTCGTTT 21002 || | |||||||| ||||||| ||| || |||||| || | | | |||| ||| Sbjct 360 TGGCGGCCAGATAATCCCCCTCGCGTGCTTCCGGCGTTTTTGTAACCACCTTTTTCTTTT 301 Query 21003 TCTCCGCAGCCGGATGCTCCGGCGTGTGCGGCTTCTCTTCTTTGGGTTTGCGCTTCAGCT 21062 || |||| || |||||| | | || | | | |||| || ||||| || | || Sbjct 300 TCGCCGC---CGTGTGCTCCAAGGCGCGCAGGTGTTTTTCTCGCGGCTTGCGTTTGACCT 244 Query 21063 TTACCTTTTTCGGCTTCGGGTCTTTGGTGTGCAGCCAGCTGGCGACCACGCCGGTATAGG 21122 ||||||||||||||||||| ||| |||| |||||||||||||| |||||||||||| | Sbjct 243 TTACCTTTTTCGGCTTCGGATCTCTGGTATGCAGCCAGCTGGCCGTCACGCCGGTATATG 184 Query 21123 CACCGCGATCGGCAATGCTGAAGCTGTGCCGGTCGCCGTCCTGGCGGGTCAGGGTCAGCT 21182 | || || || || ||||||||| |||| ||||| |||||||| || || | ||||||| Sbjct 183 CGCCCCGGTCAGCGATGCTGAAGGTGTGGCGGTCACCGTCCTGTCGTGTAATCGTCAGCT 124 Query 21183 GCGGGATCGGTTTGCCGCTGACGGTAACCCCGGCACCGGGCCGGATAAACAGCAGACGTC 21242 | || || ||||| |||||| | || || ||| || || || | ||||||||| || | Sbjct 123 GTGGAATGGGTTTACCGCTGGCCGTGACGCCGCTCCCCGGACGCAGAAACAGCAGGCGAC 64 Query 21243 CTGCCTTGATGGCCGCCACCGCGCCATGCAGCGAGGCCAGCCGCGTCAGAAATTTGGCGT 21302 | ||||||||||| |||||||| || | ||||||||| |||||||||||||| || | || Sbjct 63 CGGCCTTGATGGCTGCCACCGCACCGTACAGCGAGGCAAGCCGCGTCAGAAACTTCGTGT 4 Query 21303 C 21303 | Sbjct 3 C 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94473192989028