Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq8857 627 9e-175 seq7678 361 6e-95 seq7307 241 1e-58 seq7318 161 1e-34 >seq8857 Length=8770 Score = 627 bits (694), Expect = 9e-175 Identities = 732/986 (74%), Gaps = 2/986 (0%) Strand=Plus/Minus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 || ||||||||| | |||||||| || ||||||||||| |||| ||||| || || || Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371 Query 160936 ATGATTCCCTGCTTGCTCGCTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTCC 160994 ||||| || ||| | | || || | ||| || ||||| |||||| ||| |||||| Sbjct 6370 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATCATAGCCTTCATTGCTGCTCC 6312 Query 160995 CCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAA 161054 || || || || || || ||||||||||| || |||| || | | || |||||||| Sbjct 6311 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAA 6252 Query 161055 CATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCAT 161114 || ||||| ||||| |||| ||| ||||| ||||||||| ||||||| || || || Sbjct 6251 TATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAAT 6192 Query 161115 CTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGT 161174 |||||||| ||| | | || |||||| | ||||| |||||||||| | || |||| Sbjct 6191 ATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 6132 Query 161175 GTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCG 161234 | |||||| | | || | | |||||||||||||||||||||||| || ||| Sbjct 6131 TCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCG 6072 Query 161235 TCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGC 161294 |||||| ||||| ||||||||| || || || || |||||||| || || || | ||| Sbjct 6071 TCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGC 6012 Query 161295 AGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCAT 161354 || ||| || | || || | |||||||| || ||||||| |||||||| ||||| Sbjct 6011 TGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCAT 5952 Query 161355 CTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCC 161414 |||||||| ||||||| ||| |||| ||||| || || |||||||| || |||||||| Sbjct 5951 TTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCC 5892 Query 161415 CTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGG 161474 || || ||| | || ||||| ||||| ||||| || || || || ||||| ||||| || Sbjct 5891 ATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGG 5832 Query 161475 TTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGG 161534 ||| |||| || ||| || | | ||||| || ||||| || || || | || Sbjct 5831 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGG 5772 Query 161535 TTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGG 161594 |||||| ||||||||||| ||||| || || || || || ||||| || || || || || Sbjct 5771 TTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGG 5712 Query 161595 TCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGC 161654 || |||| |||||||| || ||||||||||| || || | || |||||| | || Sbjct 5711 CCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGC 5652 Query 161655 TGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAA 161714 ||||||||| ||| | || || ||||| ||||| | || | || || ||||| ||||| Sbjct 5651 TGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 5592 Query 161715 CCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACAC 161774 | ||||||||||| ||||| || ||| | ||||||||||| ||| || || || || Sbjct 5591 TTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 5532 Query 161775 CTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGC 161834 ||| || || | | ||||| ||| ||||| |||||||| ||||| || || ||||| Sbjct 5531 CTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 5472 Query 161835 TCACAACTTCCCTCTTGACCTTGCTG 161860 ||| ||||||||||| ||||| |||| Sbjct 5471 TCATAACTTCCCTCTAGACCTAGCTG 5446 >seq7678 Length=557 Score = 361 bits (400), Expect = 6e-95 Identities = 340/433 (79%), Gaps = 0/433 (0%) Strand=Plus/Minus Query 161469 GCACGGTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAA 161528 ||||||||| ||||||| || || |||| ||||||||||| |||| ||| || || || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 161529 CTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTA 161588 ||| |||||||||||||| ||||||||||| |||||||||||||| ||||| ||||| || Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 161589 CTTCGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTT 161648 ||| ||||| |||| |||||||||||||||||||||||| ||| || ||||||||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373 Query 161649 CCTTGCTGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGC 161708 | | ||||| ||||| || | || |||||||| || || | || | ||||| ||||| Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313 Query 161709 ATTCAACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTAT 161768 ||||||||||| || |||||||||||||| || | | ||| ||| ||| || || Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253 Query 161769 CAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCG 161828 | || ||||| ||||| ||||||| ||| | || |||||||| ||||||||||| Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193 Query 161829 CAATGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGAGTCCACTCCTGTGGCACTCCA 161888 || |||||||||||||| | ||| | ||||||| ||| |||||||||| | Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAAC 133 Query 161889 AGCACCTGCAATC 161901 |||||||||||| Sbjct 132 TGCACCTGCAATC 120 >seq7307 Length=548 Score = 241 bits (266), Expect = 1e-58 Identities = 337/473 (71%), Gaps = 0/473 (0%) Strand=Plus/Plus Query 162663 CACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCATGGAGTG 162722 ||||||||||| ||||| ||| | || ||||| || | | | ||| ||||| |||| Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62 Query 162723 ACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAGCATTTGAC 162782 ||||| ||||| || | | ||||| || ||| | | || || || || || || Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCAAC 122 Query 162783 TCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGGTCACAGATT 162842 | ||| || | |||||||| || || ||||| || |||||||| |||||||||||||| Sbjct 123 TACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGATA 182 Query 162843 TTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTTGTTCCCGTC 162902 |||||||| || || ||||| || ||||| || ||||| ||||| ||||| || ||| Sbjct 183 TTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAGTC 242 Query 162903 ATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTTCGTGCTTAC 162962 | || | |||| || | || || | || | || | || || || |||||| Sbjct 243 ACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTTAC 302 Query 162963 GACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACGTTCTATACA 163022 ||||| ||||| |||||| | || || ||||||||||| || ||||| || |||||||| Sbjct 303 GACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATACC 362 Query 163023 AAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGACCAACCTCAT 163082 || |||||| | ||||| || || | || || ||| | || || || || ||||| Sbjct 363 AAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTCAC 422 Query 163083 GAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCTATGATA 163135 || | ||||| ||||| || ||||| | || | || |||||||| | ||| Sbjct 423 GAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAATA 475 >seq7318 Length=447 Score = 161 bits (178), Expect = 1e-34 Identities = 235/332 (71%), Gaps = 0/332 (0%) Strand=Plus/Plus Query 162498 AATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATCTATCCT 162557 ||||| || || || || ||||| |||||||| || ||| ||| ||||| || ||||| Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 162558 TTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTC 162617 |||| || | ||||| || || || || || || ||||| || || || ||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 162618 CTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAATCCTTTTCACATGATGGGCGTA 162677 | || || | |||||||| ||||| ||||| | || || ||||| |||||||| || Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 162678 GCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATTCATGGAGTGACAGTTGAAAATACA 162737 || ||| | | || | || |||| | ||||||||||| | ||| || |||||||| Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 162738 CTGTACGAAGATGGCGAACAAGCAAACACTTTTAAAGCATTTGACTCCACACAGGAGGAA 162797 | | |||||||| || ||||| || || || ||| || | || || | ||| Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 162798 GAAACGTATTCGATGGTTACTGCGAACCGCTT 162829 ||||| ||||| ||||| ||||| |||||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTT 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547686133034040